RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 TMEM41BQ5BJD5 291 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 ZNF787Q6DD87 383 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 UQCC3Q6UW78 93 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 OR5B3Q8NH48 314 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 P2RX4Q99571 388 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 SIRPDQ9H106 197 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 GSX1Q9H4S2 264 aaPredicted RBP6.23□□□□□ -1.41
NEK3-207ENST00000617054 FNDC4Q9H6D8 234 aaPredicted RBP6.23□□□□□ -1.41
NEK3-207ENST00000617054 S4R3C0 116 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 FAM74A7A6NL05 159 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 CNIH1O95406 144 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 COX6B1P14854 86 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 MDKP21741 143 aaPredicted RBP6.23□□□□□ -1.41
NEK3-207ENST00000617054 MFAP2P55001 183 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 KIAA0141Q14154 515 aaPredicted RBP6.23□□□□□ -1.41
NEK3-207ENST00000617054 GAMTQ14353 236 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 PRSS8Q16651 343 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 VWC2Q2TAL6 325 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 FAM74A3Q4VXF1 159 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 KLF17Q5JT82 389 aaPredicted RBP6.23□□□□□ -1.41
NEK3-207ENST00000617054 SPATA31B1PQ5VZV4 182 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 FAM71F2Q6NXP2 309 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 NPVFQ9HCQ7 196 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 FKBP11Q9NYL4 201 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 WDR83OSQ9Y284 106 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 HECTD1Q9ULT8 2610 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 PRRC2AP48634 2157 aaKnown RBP6.22□□□□□ -1.41
NEK3-207ENST00000617054 FASNP49327 2511 aaKnown RBP6.22□□□□□ -1.41
NEK3-207ENST00000617054 MAP1LC3B2A6NCE7 125 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 ODF3BA8MYP8 253 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 YIF1AO95070 293 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 RBP4P02753 201 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 SAA4P35542 130 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 OPRK1P41145 380 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 LGALS7P47929 136 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 ERHP84090 104 aaKnown RBP6.22□□□□□ -1.41
NEK3-207ENST00000617054 SERF2P84101 59 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 VSTM2AQ8TAG5 236 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 CFHR4Q92496 578 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 MISP3Q96FF7 219 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 PSMG3Q9BT73 122 aaPredicted RBP6.22□□□□□ -1.41
NEK3-207ENST00000617054 MAP1LC3BQ9GZQ8 125 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 WNT10AQ9GZT5 417 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 AMMECR1Q9Y4X0 333 aaPredicted RBP6.22□□□□□ -1.41
NEK3-207ENST00000617054 PXMP4Q9Y6I8 212 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 SONP18583 2426 aaKnown RBP6.22□□□□□ -1.41
NEK3-207ENST00000617054 CLEC2AQ6UVW9 174 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 CBLN2Q8IUK8 224 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 C10orf105Q8TEF2 133 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 PIMREGQ9BSJ6 248 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 GGTLC1Q9BX51 225 aa6.22□□□□□ -1.41
NEK3-207ENST00000617054 KLF2Q9Y5W3 355 aaPredicted RBP6.22□□□□□ -1.41
NEK3-207ENST00000617054 TSPAN4O14817 238 aa6.21□□□□□ -1.41
NEK3-207ENST00000617054 FOXH1O75593 365 aa6.21□□□□□ -1.41
NEK3-207ENST00000617054 CRYGBP07316 175 aa6.21□□□□□ -1.41
NEK3-207ENST00000617054 UBE2G2P60604 165 aa6.21□□□□□ -1.41
NEK3-207ENST00000617054 ZNF90Q03938 601 aa6.21□□□□□ -1.41
NEK3-207ENST00000617054 TEPPQ6URK8 271 aa6.21□□□□□ -1.41
NEK3-207ENST00000617054 CYB561D1Q8N8Q1 229 aa6.21□□□□□ -1.41
NEK3-207ENST00000617054 ABHD5Q8WTS1 349 aa6.21□□□□□ -1.41
NEK3-207ENST00000617054 C22orf15Q8WYQ4 148 aa6.21□□□□□ -1.41
NEK3-207ENST00000617054 CENPVL3A0A0U1RRI6 287 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 IGLC7A0M8Q6 106 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 RPL27AP46776 148 aaKnown RBP6.21□□□□□ -1.42
NEK3-207ENST00000617054 B2MP61769 119 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 ICAM4Q14773 271 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 STPG3Q8N7X2 389 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 NPIPB3Q92617 1050 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 AJUBAQ96IF1 538 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 NKX6-2Q9C056 277 aaPredicted RBP6.21□□□□□ -1.42
NEK3-207ENST00000617054 AP5S1Q9NUS5 200 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 DOK5Q9P104 306 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 LSM4Q9Y4Z0 139 aaKnown RBP6.21□□□□□ -1.42
NEK3-207ENST00000617054 DMRT1Q9Y5R6 373 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 PUS1Q9Y606 427 aaKnown RBP eCLIP6.21□□□□□ -1.42
NEK3-207ENST00000617054 KPTNQ9Y664 436 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 NOTCH2Q04721 2471 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 OR10J1P30954 320 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 COMPP49747 757 aaPredicted RBP6.21□□□□□ -1.42
NEK3-207ENST00000617054 PEA15Q15121 130 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 RNF152Q8N8N0 203 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 TEX45Q8NA69 505 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 SRSF12Q8WXF0 261 aaKnown RBP6.21□□□□□ -1.42
NEK3-207ENST00000617054 SLC25A33Q9BSK2 321 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 SEC11CQ9BY50 192 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 CDIP1Q9H305 208 aa6.21□□□□□ -1.42
NEK3-207ENST00000617054 ACANP16112 2415 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 C17orf112F2Z3M2 114 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 SCAF4O95104 1147 aaKnown RBP6.2□□□□□ -1.42
NEK3-207ENST00000617054 MOSP00540 346 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 HSPB1P04792 205 aaKnown RBP6.2□□□□□ -1.42
NEK3-207ENST00000617054 IGHV4-38-2P0DP08 117 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 CEACAM3P40198 252 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 DLK1P80370 383 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 BSXQ3C1V8 233 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 C2orf83Q53S99 150 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 CENPVQ7Z7K6 275 aaPredicted RBP6.2□□□□□ -1.42
NEK3-207ENST00000617054 TMEM219Q86XT9 240 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 MMD2Q8IY49 270 aa6.2□□□□□ -1.42
NEK3-207ENST00000617054 CREBBPQ92793 2442 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms