RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 C19orf24Q9BVV8 132 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 DECR2Q9NUI1 292 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 GAGE2DQ9UEU5 116 aa11.32□□□□□ -0.6
PPP4R3B-205ENST00000616288 TRAV8-2A0A0B4J237 113 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 OR2H2O95918 312 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 LINC00173Q6ZV60 143 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 CHCHD1Q96BP2 118 aaKnown RBP11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 TCF19Q9Y242 345 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 NCBP2LA6PVI3 153 aaKnown RBP11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 IFI6P09912 130 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 HERV-K104P63124 156 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 ARG2P78540 354 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 ATP5G2Q06055 141 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 TET1Q8NFU7 2136 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 VWA8A3KMH1 1905 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 TRBV20OR9-2A0A075B6H5 130 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 FAM90A10PA6NDY2 464 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 FAM90A18PA6NE21 464 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 FAM90A16PA6NEW6 464 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 FAM90A20PA6NIJ5 464 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 FAM90A8PA6NJQ4 464 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 FAM90A7PA6NKC0 464 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 FAM90A22PA8MWA6 464 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 FAM90A12PA8MX19 464 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 FAM90A5PA8MXJ8 464 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 FAM90A23PA8MXZ1 464 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 J3QR06 171 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 FAM90A15PP0C7V4 464 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 FAM90A13PP0C7W8 464 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 FAM90A14PP0C7W9 464 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 FAM90A24PP0C7X0 464 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 SRD5A2P31213 254 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 GNG5P63218 68 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 TREML4Q6UXN2 200 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 GGTLC1Q9BX51 225 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 PLSCR4Q9NRQ2 329 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 VSTM5A8MXK1 200 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 K7EN84 100 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 RPL13AP40429 203 aaKnown RBP11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 FER1L5A0AVI2 2057 aa11.31□□□□□ -0.6
PPP4R3B-205ENST00000616288 K7ERJ3 54 aa11.3□□□□□ -0.6
PPP4R3B-205ENST00000616288 TEX45Q8NA69 505 aa11.3□□□□□ -0.6
PPP4R3B-205ENST00000616288 DEFB108BQ8NET1 73 aa11.3□□□□□ -0.6
PPP4R3B-205ENST00000616288 RPEQ96AT9 228 aa11.3□□□□□ -0.6
PPP4R3B-205ENST00000616288 AHRRA9YTQ3 701 aa11.3□□□□□ -0.6
PPP4R3B-205ENST00000616288 PRB4P10163 310 aaPredicted RBP11.3□□□□□ -0.6
PPP4R3B-205ENST00000616288 MED12LQ86YW9 2145 aa11.3□□□□□ -0.6
PPP4R3B-205ENST00000616288 NPIPB13A6NJU9 1138 aa11.3□□□□□ -0.6
PPP4R3B-205ENST00000616288 NPIPB4C9JG80 1138 aa11.3□□□□□ -0.6
PPP4R3B-205ENST00000616288 COX8AP10176 69 aa11.3□□□□□ -0.6
PPP4R3B-205ENST00000616288 YLPM1P49750 1951 aaKnown RBP11.3□□□□□ -0.6
PPP4R3B-205ENST00000616288 PEX7O00628 323 aa11.29□□□□□ -0.6
PPP4R3B-205ENST00000616288 KIR3DL3Q8N743 410 aa11.29□□□□□ -0.6
PPP4R3B-205ENST00000616288 OR52E5Q8NH55 327 aa11.29□□□□□ -0.6
PPP4R3B-205ENST00000616288 SSC4DQ8WTU2 575 aa11.29□□□□□ -0.6
PPP4R3B-205ENST00000616288 OOEPA6NGQ2 149 aa11.29□□□□□ -0.6
PPP4R3B-205ENST00000616288 Q8IYB0 196 aa11.29□□□□□ -0.6
PPP4R3B-205ENST00000616288 AKAP6Q13023 2319 aa11.29□□□□□ -0.6
PPP4R3B-205ENST00000616288 PRTN3P24158 256 aa11.29□□□□□ -0.6
PPP4R3B-205ENST00000616288 TFF2Q03403 129 aa11.29□□□□□ -0.6
PPP4R3B-205ENST00000616288 FADS6Q8N9I5 356 aa11.29□□□□□ -0.6
PPP4R3B-205ENST00000616288 LINC00470Q9BZP3 86 aa11.29□□□□□ -0.6
PPP4R3B-205ENST00000616288 IGHV3-21A0A0B4J1V1 117 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 WFDC2Q14508 124 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 RPS19BP1Q86WX3 136 aaKnown RBP11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 ZNF502Q8TBZ5 544 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 RPP21Q9H633 154 aaKnown RBP11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 IGHV1-24A0A0C4DH33 117 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 SPAARA0A1B0GVQ0 90 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 J3QT63 122 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 SMAD7O15105 426 aaKnown RBP11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 IGLV3-21P80748 117 aaPredicted RBP11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 EP400Q96L91 3159 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 H0YJW9 148 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 F2RL2O00254 374 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 REG1AP05451 166 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 LGALS7P47929 136 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 PSG7Q13046 419 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 TBC1D28Q2M2D7 210 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 ROS1P08922 2347 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 IGKV3-11P04433 115 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 GAGE5Q13069 117 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 GAGE6Q13070 117 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 SPEM1Q8N4L4 309 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 NEUROG1Q92886 237 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 RPP25Q9BUL9 199 aaKnown RBP11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 RAB9BQ9NP90 201 aa11.28□□□□□ -0.6
PPP4R3B-205ENST00000616288 hCG_38984A0A1B0GV85 526 aa11.27□□□□□ -0.6
PPP4R3B-205ENST00000616288 PYYP10082 97 aa11.27□□□□□ -0.6
PPP4R3B-205ENST00000616288 MGST2Q99735 147 aa11.27□□□□□ -0.6
PPP4R3B-205ENST00000616288 VGLL1Q99990 258 aa11.27□□□□□ -0.6
PPP4R3B-205ENST00000616288 APELAP0DMC3 54 aa11.27□□□□□ -0.61
PPP4R3B-205ENST00000616288 FCGR2BP31994 310 aaPredicted RBP11.27□□□□□ -0.61
PPP4R3B-205ENST00000616288 PCSK4Q6UW60 755 aa11.27□□□□□ -0.61
PPP4R3B-205ENST00000616288 RBPMS2Q6ZRY4 209 aaKnown RBP11.27□□□□□ -0.61
PPP4R3B-205ENST00000616288 MYOZ3Q8TDC0 251 aa11.27□□□□□ -0.61
PPP4R3B-205ENST00000616288 MPC1Q9Y5U8 109 aa11.27□□□□□ -0.61
PPP4R3B-205ENST00000616288 BRWD3Q6RI45 1802 aa11.27□□□□□ -0.61
PPP4R3B-205ENST00000616288 A6NJY4 79 aa11.27□□□□□ -0.61
PPP4R3B-205ENST00000616288 LINC00205P59089 165 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms