RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 PEX7O00628 323 aa12.28□□□□□ -0.44
SNPH-203ENST00000614659 TMEM170AQ8WVE7 144 aa12.28□□□□□ -0.44
SNPH-203ENST00000614659 DDB2Q92466 427 aa12.28□□□□□ -0.44
SNPH-203ENST00000614659 H7C2G1 150 aa12.27□□□□□ -0.44
SNPH-203ENST00000614659 NDUFS8O00217 210 aa12.27□□□□□ -0.44
SNPH-203ENST00000614659 SNRPD3P62318 126 aaKnown RBP12.27□□□□□ -0.44
SNPH-203ENST00000614659 JOSD1Q15040 202 aaPredicted RBP12.27□□□□□ -0.44
SNPH-203ENST00000614659 IGKV1-27A0A075B6S5 117 aa12.27□□□□□ -0.45
SNPH-203ENST00000614659 NUTF2P61970 127 aaKnown RBP12.27□□□□□ -0.45
SNPH-203ENST00000614659 IGHV1-18A0A0C4DH31 117 aa12.27□□□□□ -0.45
SNPH-203ENST00000614659 UBE2CO00762 179 aa12.27□□□□□ -0.45
SNPH-203ENST00000614659 PLAUP00749 431 aa12.27□□□□□ -0.45
SNPH-203ENST00000614659 TCF24Q7RTU0 167 aa12.27□□□□□ -0.45
SNPH-203ENST00000614659 TNFRSF14Q92956 283 aa12.27□□□□□ -0.45
SNPH-203ENST00000614659 DUX5Q96PT3 197 aa12.27□□□□□ -0.45
SNPH-203ENST00000614659 NUDT3O95989 172 aa12.27□□□□□ -0.45
SNPH-203ENST00000614659 MOSP00540 346 aa12.27□□□□□ -0.45
SNPH-203ENST00000614659 SCGB1A1P11684 91 aa12.27□□□□□ -0.45
SNPH-203ENST00000614659 FAM169BQ8N8A8 192 aa12.27□□□□□ -0.45
SNPH-203ENST00000614659 FGFBP3Q8TAT2 258 aa12.27□□□□□ -0.45
SNPH-203ENST00000614659 B4DSR2 109 aa12.26□□□□□ -0.45
SNPH-203ENST00000614659 VDAC2P45880 294 aaPredicted RBP12.26□□□□□ -0.45
SNPH-203ENST00000614659 WDR83OSQ9Y284 106 aa12.26□□□□□ -0.45
SNPH-203ENST00000614659 RRHO14718 337 aa12.26□□□□□ -0.45
SNPH-203ENST00000614659 SRSF3P84103 164 aaKnown RBP12.26□□□□□ -0.45
SNPH-203ENST00000614659 NMSQ5H8A3 153 aa12.26□□□□□ -0.45
SNPH-203ENST00000614659 MIEN1Q9BRT3 115 aa12.26□□□□□ -0.45
SNPH-203ENST00000614659 B3GALT5-AS1P59052 145 aa12.26□□□□□ -0.45
SNPH-203ENST00000614659 CCL20P78556 96 aa12.26□□□□□ -0.45
SNPH-203ENST00000614659 NIT1Q86X76 327 aa12.26□□□□□ -0.45
SNPH-203ENST00000614659 NDUFAF3Q9BU61 184 aa12.26□□□□□ -0.45
SNPH-203ENST00000614659 SAA2-SAA4A0A096LPE2 208 aa12.26□□□□□ -0.45
SNPH-203ENST00000614659 SCO2A0A1W2PP80 73 aa12.26□□□□□ -0.45
SNPH-203ENST00000614659 IZUMO1RA6ND01 250 aa12.26□□□□□ -0.45
SNPH-203ENST00000614659 CGAP01215 116 aa12.26□□□□□ -0.45
SNPH-203ENST00000614659 SAA2P0DJI9 122 aaPredicted RBP12.26□□□□□ -0.45
SNPH-203ENST00000614659 SRSF12Q8WXF0 261 aaKnown RBP12.26□□□□□ -0.45
SNPH-203ENST00000614659 ANOS1P23352 680 aa12.25□□□□□ -0.45
SNPH-203ENST00000614659 NPPCP23582 126 aa12.25□□□□□ -0.45
SNPH-203ENST00000614659 DUTP33316 252 aaKnown RBP12.25□□□□□ -0.45
SNPH-203ENST00000614659 ABCA7Q8IZY2 2146 aa12.25□□□□□ -0.45
SNPH-203ENST00000614659 KCNS1Q96KK3 526 aa12.25□□□□□ -0.45
SNPH-203ENST00000614659 MRPL20Q9BYC9 149 aaKnown RBP12.25□□□□□ -0.45
SNPH-203ENST00000614659 TBL2Q9Y4P3 447 aaKnown RBP12.25□□□□□ -0.45
SNPH-203ENST00000614659 IGKV3-7A0A075B6H7 116 aa12.25□□□□□ -0.45
SNPH-203ENST00000614659 TRGV3P03979 118 aa12.25□□□□□ -0.45
SNPH-203ENST00000614659 SNRPCP09234 159 aaKnown RBP12.25□□□□□ -0.45
SNPH-203ENST00000614659 NBEAP1P0C6P0 100 aa12.25□□□□□ -0.45
SNPH-203ENST00000614659 PRCDQ00LT1 54 aa12.25□□□□□ -0.45
SNPH-203ENST00000614659 FAM216BQ8N7L0 139 aa12.25□□□□□ -0.45
SNPH-203ENST00000614659 NEU1Q99519 415 aa12.25□□□□□ -0.45
SNPH-203ENST00000614659 C2orf83Q53S99 150 aa12.25□□□□□ -0.45
SNPH-203ENST00000614659 IL4P05112 153 aa12.25□□□□□ -0.45
SNPH-203ENST00000614659 LGALS3P17931 250 aaKnown RBP12.25□□□□□ -0.45
SNPH-203ENST00000614659 ZNF257Q9Y2Q1 563 aa12.25□□□□□ -0.45
SNPH-203ENST00000614659 CLDN16Q9Y5I7 305 aa12.25□□□□□ -0.45
SNPH-203ENST00000614659 A0A1W2PRE2 83 aa12.24□□□□□ -0.45
SNPH-203ENST00000614659 ATP5G3P48201 142 aa12.24□□□□□ -0.45
SNPH-203ENST00000614659 SCN8AQ9UQD0 1980 aa12.24□□□□□ -0.45
SNPH-203ENST00000614659 IGHV3OR16-10A0A075B7F0 116 aa12.24□□□□□ -0.45
SNPH-203ENST00000614659 C7orf71A4D174 169 aa12.24□□□□□ -0.45
SNPH-203ENST00000614659 Q0VFX4 171 aa12.24□□□□□ -0.45
SNPH-203ENST00000614659 IGF2-ASQ6U949 168 aa12.24□□□□□ -0.45
SNPH-203ENST00000614659 OSTCQ9NRP0 149 aa12.24□□□□□ -0.45
SNPH-203ENST00000614659 SP5Q6BEB4 398 aaPredicted RBP12.24□□□□□ -0.45
SNPH-203ENST00000614659 EMP1P54849 157 aa12.24□□□□□ -0.45
SNPH-203ENST00000614659 HEPN1Q6WQI6 88 aa12.24□□□□□ -0.45
SNPH-203ENST00000614659 TEX45Q8NA69 505 aa12.24□□□□□ -0.45
SNPH-203ENST00000614659 WNT10AQ9GZT5 417 aa12.24□□□□□ -0.45
SNPH-203ENST00000614659 OTORQ9NRC9 128 aa12.24□□□□□ -0.45
SNPH-203ENST00000614659 A0A0G2JNJ9 132 aa12.24□□□□□ -0.45
SNPH-203ENST00000614659 RPP21Q9H633 154 aaKnown RBP12.24□□□□□ -0.45
SNPH-203ENST00000614659 Q9UFV3 132 aa12.24□□□□□ -0.45
SNPH-203ENST00000614659 COL4A6Q14031 1691 aa12.23□□□□□ -0.45
SNPH-203ENST00000614659 REG1AP05451 166 aa12.23□□□□□ -0.45
SNPH-203ENST00000614659 SAA1P0DJI8 122 aaPredicted RBP12.23□□□□□ -0.45
SNPH-203ENST00000614659 GOLT1AQ6ZVE7 132 aa12.23□□□□□ -0.45
SNPH-203ENST00000614659 FOXA2Q9Y261 457 aaPredicted RBP12.23□□□□□ -0.45
SNPH-203ENST00000614659 TRBV24-1A0A075B6N3 115 aa12.23□□□□□ -0.45
SNPH-203ENST00000614659 ALKBH7Q9BT30 221 aaPredicted RBP12.23□□□□□ -0.45
SNPH-203ENST00000614659 OOSP1A8MZH6 123 aa12.23□□□□□ -0.45
SNPH-203ENST00000614659 SRRM5B3KS81 715 aa12.23□□□□□ -0.45
SNPH-203ENST00000614659 CX3CL1P78423 397 aa12.23□□□□□ -0.45
SNPH-203ENST00000614659 PLAURQ03405 335 aa12.23□□□□□ -0.45
SNPH-203ENST00000614659 PPP1R27Q86WC6 154 aa12.23□□□□□ -0.45
SNPH-203ENST00000614659 KLHDC3Q9BQ90 382 aa12.23□□□□□ -0.45
SNPH-203ENST00000614659 AGMATQ9BSE5 352 aa12.23□□□□□ -0.45
SNPH-203ENST00000614659 MIR17HGQ75NE6 70 aa12.23□□□□□ -0.45
SNPH-203ENST00000614659 SCN2AQ99250 2005 aa12.22□□□□□ -0.45
SNPH-203ENST00000614659 PVRIGQ6DKI7 326 aa12.22□□□□□ -0.45
SNPH-203ENST00000614659 C14orf144Q96I85 54 aa12.22□□□□□ -0.45
SNPH-203ENST00000614659 C1QTNF9BB2RNN3 333 aa12.22□□□□□ -0.45
SNPH-203ENST00000614659 CIARTQ8N365 385 aaPredicted RBP12.22□□□□□ -0.45
SNPH-203ENST00000614659 COPS9Q8WXC6 57 aa12.22□□□□□ -0.45
SNPH-203ENST00000614659 FAM53AQ6NSI3 398 aaPredicted RBP12.22□□□□□ -0.45
SNPH-203ENST00000614659 ZNF414Q96IQ9 312 aa12.22□□□□□ -0.45
SNPH-203ENST00000614659 GPR82Q96P67 336 aa12.22□□□□□ -0.45
SNPH-203ENST00000614659 MYOD1P15172 320 aa12.22□□□□□ -0.45
SNPH-203ENST00000614659 GATA3P23771 443 aa12.22□□□□□ -0.45
SNPH-203ENST00000614659 CMC4P56277 68 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms