RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 LY86O95711 162 aa16.81■□□□□ 0.28
CBWD1-223ENST00000613988 IL6RP08887 468 aaPredicted RBP16.81■□□□□ 0.28
CBWD1-223ENST00000613988 POLR2GP62487 172 aaKnown RBP eCLIP16.81■□□□□ 0.28
CBWD1-223ENST00000613988 VAMP2P63027 116 aa16.81■□□□□ 0.28
CBWD1-223ENST00000613988 TNFRSF9Q07011 255 aa16.81■□□□□ 0.28
CBWD1-223ENST00000613988 TMUB2Q71RG4 321 aa16.81■□□□□ 0.28
CBWD1-223ENST00000613988 SSX9Q7RTT3 188 aa16.81■□□□□ 0.28
CBWD1-223ENST00000613988 ZNF429Q86V71 674 aa16.81■□□□□ 0.28
CBWD1-223ENST00000613988 OR52E5Q8NH55 327 aa16.81■□□□□ 0.28
CBWD1-223ENST00000613988 OR4A5Q8NH83 315 aa16.81■□□□□ 0.28
CBWD1-223ENST00000613988 CLCC1Q96S66 551 aa16.81■□□□□ 0.28
CBWD1-223ENST00000613988 BOLA1Q9Y3E2 137 aa16.81■□□□□ 0.28
CBWD1-223ENST00000613988 OVOL1O14753 267 aa16.8■□□□□ 0.28
CBWD1-223ENST00000613988 SYNGR2O43760 224 aa16.8■□□□□ 0.28
CBWD1-223ENST00000613988 OR9G9P0C7N8 305 aa16.8■□□□□ 0.28
CBWD1-223ENST00000613988 EGR2P11161 476 aaPredicted RBP16.8■□□□□ 0.28
CBWD1-223ENST00000613988 RPS16P62249 146 aaKnown RBP16.8■□□□□ 0.28
CBWD1-223ENST00000613988 PPP1R27Q86WC6 154 aa16.8■□□□□ 0.28
CBWD1-223ENST00000613988 VKORC1L1Q8N0U8 176 aa16.8■□□□□ 0.28
CBWD1-223ENST00000613988 PUSL1Q8N0Z8 303 aaKnown RBP16.8■□□□□ 0.28
CBWD1-223ENST00000613988 METTL1Q9UBP6 276 aaKnown RBP16.8■□□□□ 0.28
CBWD1-223ENST00000613988 SSSCA1O60232 199 aa16.79■□□□□ 0.28
CBWD1-223ENST00000613988 RBMXL2O75526 392 aaKnown RBP16.79■□□□□ 0.28
CBWD1-223ENST00000613988 FGF2P09038 288 aa16.79■□□□□ 0.28
CBWD1-223ENST00000613988 TAS2R30P59541 319 aa16.79■□□□□ 0.28
CBWD1-223ENST00000613988 PSG5Q15238 335 aa16.79■□□□□ 0.28
CBWD1-223ENST00000613988 AKIRIN2Q53H80 203 aa16.79■□□□□ 0.28
CBWD1-223ENST00000613988 UNQ5815/PRO19632Q6UWF5 114 aa16.79■□□□□ 0.28
CBWD1-223ENST00000613988 TSNAXQ99598 290 aaKnown RBP16.79■□□□□ 0.28
CBWD1-223ENST00000613988 FAM103A1Q9BTL3 118 aaKnown RBP16.79■□□□□ 0.28
CBWD1-223ENST00000613988 ARL6Q9H0F7 186 aa16.79■□□□□ 0.28
CBWD1-223ENST00000613988 MAGT1Q9H0U3 335 aa16.79■□□□□ 0.28
CBWD1-223ENST00000613988 PRNDQ9UKY0 176 aa16.79■□□□□ 0.28
CBWD1-223ENST00000613988 U3KQK5 164 aa16.79■□□□□ 0.28
CBWD1-223ENST00000613988 SORL1Q92673 2214 aa16.79■□□□□ 0.28
CBWD1-223ENST00000613988 C15orf61A6NNL5 157 aa16.78■□□□□ 0.28
CBWD1-223ENST00000613988 SRRM4A7MD48 611 aaKnown RBP16.78■□□□□ 0.28
CBWD1-223ENST00000613988 LINC01619G3V211 115 aa16.78■□□□□ 0.28
CBWD1-223ENST00000613988 UPK2O00526 184 aa16.78■□□□□ 0.28
CBWD1-223ENST00000613988 RPL12P30050 165 aaKnown RBP16.78■□□□□ 0.28
CBWD1-223ENST00000613988 SLURP1P55000 103 aa16.78■□□□□ 0.28
CBWD1-223ENST00000613988 SPCS3P61009 180 aa16.78■□□□□ 0.28
CBWD1-223ENST00000613988 UBE2KP61086 200 aa16.78■□□□□ 0.28
CBWD1-223ENST00000613988 OPCMLQ14982 345 aa16.78■□□□□ 0.28
CBWD1-223ENST00000613988 VMA21Q3ZAQ7 101 aa16.78■□□□□ 0.28
CBWD1-223ENST00000613988 ZNF562Q6V9R5 426 aa16.78■□□□□ 0.28
CBWD1-223ENST00000613988 DLX4Q92988 240 aaPredicted RBP16.78■□□□□ 0.28
CBWD1-223ENST00000613988 ASCL2Q99929 193 aa16.78■□□□□ 0.28
CBWD1-223ENST00000613988 FKBP11Q9NYL4 201 aa16.78■□□□□ 0.28
CBWD1-223ENST00000613988 SAP30O75446 220 aa16.77■□□□□ 0.28
CBWD1-223ENST00000613988 CA2P00918 260 aa16.77■□□□□ 0.28
CBWD1-223ENST00000613988 LGALS1P09382 135 aaKnown RBP16.77■□□□□ 0.28
CBWD1-223ENST00000613988 SAA1P0DJI8 122 aaPredicted RBP16.77■□□□□ 0.28
CBWD1-223ENST00000613988 OR2C3Q8N628 320 aa16.77■□□□□ 0.28
CBWD1-223ENST00000613988 LFNGQ8NES3 379 aa16.77■□□□□ 0.28
CBWD1-223ENST00000613988 SMIM8Q96KF7 97 aa16.77■□□□□ 0.28
CBWD1-223ENST00000613988 MS4A10Q96PG2 267 aa16.77■□□□□ 0.28
CBWD1-223ENST00000613988 CIB3Q96Q77 187 aaPredicted RBP16.77■□□□□ 0.28
CBWD1-223ENST00000613988 SLC25A31Q9H0C2 315 aa16.77■□□□□ 0.28
CBWD1-223ENST00000613988 SLA2Q9H6Q3 261 aa16.77■□□□□ 0.28
CBWD1-223ENST00000613988 LYRM2Q9NU23 88 aaPredicted RBP16.77■□□□□ 0.28
CBWD1-223ENST00000613988 TMEM14BQ9NUH8 114 aa16.77■□□□□ 0.28
CBWD1-223ENST00000613988 ZNF257Q9Y2Q1 563 aa16.77■□□□□ 0.28
CBWD1-223ENST00000613988 KANTRA0A1W2PQU2 76 aa16.77■□□□□ 0.27
CBWD1-223ENST00000613988 KBTBD11O94819 623 aa16.77■□□□□ 0.27
CBWD1-223ENST00000613988 IGLV2-23P01705 113 aa16.77■□□□□ 0.27
CBWD1-223ENST00000613988 AP2S1P53680 142 aaPredicted RBP16.77■□□□□ 0.27
CBWD1-223ENST00000613988 TEX45Q8NA69 505 aa16.77■□□□□ 0.27
CBWD1-223ENST00000613988 TMEM167AQ8TBQ9 72 aa16.77■□□□□ 0.27
CBWD1-223ENST00000613988 QTRT1Q9BXR0 403 aaKnown RBP16.77■□□□□ 0.27
CBWD1-223ENST00000613988 RBKSQ9H477 322 aa16.77■□□□□ 0.27
CBWD1-223ENST00000613988 TPSG1Q9NRR2 321 aa16.77■□□□□ 0.27
CBWD1-223ENST00000613988 IGHV4OR15-8A0A075B7B6 117 aa16.76■□□□□ 0.27
CBWD1-223ENST00000613988 A0A087WW49 117 aa16.76■□□□□ 0.27
CBWD1-223ENST00000613988 BCL2L11O43521 198 aa16.76■□□□□ 0.27
CBWD1-223ENST00000613988 TSC22D2O75157 780 aa16.76■□□□□ 0.27
CBWD1-223ENST00000613988 NXPH3O95157 252 aa16.76■□□□□ 0.27
CBWD1-223ENST00000613988 SPDEFO95238 335 aa16.76■□□□□ 0.27
CBWD1-223ENST00000613988 IGHV3-11P01762 117 aa16.76■□□□□ 0.27
CBWD1-223ENST00000613988 TPPP2P59282 170 aa16.76■□□□□ 0.27
CBWD1-223ENST00000613988 ZC4H2Q9NQZ6 224 aa16.76■□□□□ 0.27
CBWD1-223ENST00000613988 SMAD5-AS1Q9Y6J3 95 aa16.76■□□□□ 0.27
CBWD1-223ENST00000613988 TRAV3A0A0B4J244 114 aa16.75■□□□□ 0.27
CBWD1-223ENST00000613988 MSGN1A6NI15 193 aa16.75■□□□□ 0.27
CBWD1-223ENST00000613988 TAAR5O14804 337 aa16.75■□□□□ 0.27
CBWD1-223ENST00000613988 IFNA17P01571 189 aa16.75■□□□□ 0.27
CBWD1-223ENST00000613988 PAX9P55771 341 aa16.75■□□□□ 0.27
CBWD1-223ENST00000613988 OR2B8PP59922 312 aa16.75■□□□□ 0.27
CBWD1-223ENST00000613988 HSPE1P61604 102 aaKnown RBP16.75■□□□□ 0.27
CBWD1-223ENST00000613988 ARPC1AQ92747 370 aa16.75■□□□□ 0.27
CBWD1-223ENST00000613988 ARPC5LQ9BPX5 153 aa16.75■□□□□ 0.27
CBWD1-223ENST00000613988 SLC25A17O43808 307 aa16.74■□□□□ 0.27
CBWD1-223ENST00000613988 TMEM50AO95807 157 aa16.74■□□□□ 0.27
CBWD1-223ENST00000613988 HSPB1P04792 205 aaKnown RBP16.74■□□□□ 0.27
CBWD1-223ENST00000613988 CAV2P51636 162 aa16.74■□□□□ 0.27
CBWD1-223ENST00000613988 BAXQ07812 192 aa16.74■□□□□ 0.27
CBWD1-223ENST00000613988 FXYD3Q14802 87 aa16.74■□□□□ 0.27
CBWD1-223ENST00000613988 OR5B3Q8NH48 314 aa16.74■□□□□ 0.27
CBWD1-223ENST00000613988 DTD1Q8TEA8 209 aa16.74■□□□□ 0.27
CBWD1-223ENST00000613988 CEBPZOSA8MTT3 80 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms