RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 UBE2V1Q13404 147 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 ICAM4Q14773 271 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 HEATR5AQ86XA9 2040 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 IGHV1-18A0A0C4DH31 117 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 RAMP3O60896 148 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 CD55P08174 381 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 NMUP48645 174 aa10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 MEF2CQ06413 473 aaPredicted RBP10.47□□□□□ -0.73
TNFAIP3-206ENST00000612899 SRP19P09132 144 aaKnown RBP10.46□□□□□ -0.73
TNFAIP3-206ENST00000612899 CBLN1P23435 193 aa10.46□□□□□ -0.73
TNFAIP3-206ENST00000612899 FAM106AQ4KMX7 169 aa10.46□□□□□ -0.73
TNFAIP3-206ENST00000612899 C2orf83Q53S99 150 aa10.46□□□□□ -0.73
TNFAIP3-206ENST00000612899 RNF144BQ7Z419 303 aa10.46□□□□□ -0.73
TNFAIP3-206ENST00000612899 COL4A6Q14031 1691 aa10.46□□□□□ -0.73
TNFAIP3-206ENST00000612899 A6NNC1 897 aa10.46□□□□□ -0.73
TNFAIP3-206ENST00000612899 CDKN1AP38936 164 aa10.46□□□□□ -0.73
TNFAIP3-206ENST00000612899 ATP5G2Q06055 141 aa10.46□□□□□ -0.73
TNFAIP3-206ENST00000612899 SLC25A34Q6PIV7 304 aa10.46□□□□□ -0.73
TNFAIP3-206ENST00000612899 ZNF497Q6ZNH5 498 aa10.46□□□□□ -0.73
TNFAIP3-206ENST00000612899 RAXQ9Y2V3 346 aa10.46□□□□□ -0.73
TNFAIP3-206ENST00000612899 SAA2-SAA4A0A096LPE2 208 aa10.46□□□□□ -0.74
TNFAIP3-206ENST00000612899 FBLL1A6NHQ2 334 aaKnown RBP10.46□□□□□ -0.74
TNFAIP3-206ENST00000612899 LEPROTL1O95214 131 aa10.46□□□□□ -0.74
TNFAIP3-206ENST00000612899 SAA2P0DJI9 122 aaPredicted RBP10.46□□□□□ -0.74
TNFAIP3-206ENST00000612899 CKS1BP61024 79 aa10.46□□□□□ -0.74
TNFAIP3-206ENST00000612899 FAM90A1Q86YD7 464 aa10.46□□□□□ -0.74
TNFAIP3-206ENST00000612899 HIST3H2BBQ8N257 126 aa10.46□□□□□ -0.74
TNFAIP3-206ENST00000612899 AP5S1Q9NUS5 200 aa10.46□□□□□ -0.74
TNFAIP3-206ENST00000612899 IGKV1-27A0A075B6S5 117 aa10.46□□□□□ -0.74
TNFAIP3-206ENST00000612899 ATP5G3P48201 142 aa10.46□□□□□ -0.74
TNFAIP3-206ENST00000612899 SIP14410 1827 aa10.46□□□□□ -0.74
TNFAIP3-206ENST00000612899 IGHV3OR16-12A0A075B7B8 117 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 AMY1AP04745 511 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 DLX1P56177 255 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 MORN2Q502X0 79 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 FOXA2Q9Y261 457 aaPredicted RBP10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 FNDC1Q4ZHG4 1894 aaPredicted RBP10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 SNCGO76070 127 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 CX3CL1P78423 397 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 ZNF502Q8TBZ5 544 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 C18orf12Q96KH6 178 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 CCL19Q99731 98 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 THSD7BQ9C0I4 1608 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 F8VVB4 439 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 F8VWA3 439 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 HAX1O00165 279 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 YPEL1O60688 119 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 SAA1P0DJI8 122 aaPredicted RBP10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 ANOS1P23352 680 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 C1orf194Q5T5A4 169 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 MBNL2Q5VZF2 373 aaKnown RBP10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 YPEL2Q96QA6 119 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 PHLDA3Q9Y5J5 127 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 CD24P25063 80 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 OTX1P32242 354 aaPredicted RBP10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 FOXA3P55318 350 aaPredicted RBP10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 ID3Q02535 119 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 BMPERQ8N8U9 685 aa10.45□□□□□ -0.74
TNFAIP3-206ENST00000612899 CDKN1BP46527 198 aa10.44□□□□□ -0.74
TNFAIP3-206ENST00000612899 IGHV3-66A0A0C4DH42 116 aa10.44□□□□□ -0.74
TNFAIP3-206ENST00000612899 SCO2A0A1W2PP80 73 aa10.44□□□□□ -0.74
TNFAIP3-206ENST00000612899 OR4C46A6NHA9 309 aa10.44□□□□□ -0.74
TNFAIP3-206ENST00000612899 FOXI3A8MTJ6 420 aaPredicted RBP10.44□□□□□ -0.74
TNFAIP3-206ENST00000612899 A8MWP6 167 aa10.44□□□□□ -0.74
TNFAIP3-206ENST00000612899 PSMB2P49721 201 aa10.44□□□□□ -0.74
TNFAIP3-206ENST00000612899 SPACA3Q8IXA5 215 aa10.44□□□□□ -0.74
TNFAIP3-206ENST00000612899 NEU4Q8WWR8 484 aaPredicted RBP10.44□□□□□ -0.74
TNFAIP3-206ENST00000612899 IL18BPO95998 194 aa10.44□□□□□ -0.74
TNFAIP3-206ENST00000612899 TRGV3P03979 118 aa10.44□□□□□ -0.74
TNFAIP3-206ENST00000612899 PSG9Q00887 426 aa10.44□□□□□ -0.74
TNFAIP3-206ENST00000612899 HIST1H2BLQ99880 126 aa10.44□□□□□ -0.74
TNFAIP3-206ENST00000612899 VENTXO95231 258 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 IGKV3-20P01619 116 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 MIR17HGQ75NE6 70 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 EEF1AKMT3Q96AZ1 226 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 PMCHL2Q9BQD1 86 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 GTF3C1Q12789 2109 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 HIST1H2BKO60814 126 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 HIST1H2BJP06899 126 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 GPX1P07203 203 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 HIST1H2BOP23527 126 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 HIST1H2BBP33778 126 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 HIST1H2BDP58876 126 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 HIST1H2BCP62807 126 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 HIST2H2BEQ16778 126 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 ANKRD39Q53RE8 183 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 MBD3L1Q8WWY6 194 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 HIST1H2BHQ93079 126 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 RNASE6Q93091 150 aaKnown RBP10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 HIST1H2BNQ99877 126 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 HIST1H2BMQ99879 126 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 FBXL7Q9UJT9 491 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 WDR81Q562E7 1941 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 PSPNO60542 156 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 C5orf24Q7Z6I8 188 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 DDB2Q92466 427 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 C21orf62Q9NYP8 219 aa10.43□□□□□ -0.74
TNFAIP3-206ENST00000612899 SRSF6Q13247 344 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms