RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 SCO2A0A1W2PP80 73 aa11.97□□□□□ -0.49
CDH1-213ENST00000612417 UPK2O00526 184 aa11.97□□□□□ -0.49
CDH1-213ENST00000612417 SIAH2O43255 324 aa11.97□□□□□ -0.49
CDH1-213ENST00000612417 RD3LP0DJH9 198 aa11.97□□□□□ -0.49
CDH1-213ENST00000612417 RTL8BQ17RB0 113 aa11.97□□□□□ -0.49
CDH1-213ENST00000612417 FAM216BQ8N7L0 139 aa11.97□□□□□ -0.49
CDH1-213ENST00000612417 CCL13Q99616 98 aa11.97□□□□□ -0.49
CDH1-213ENST00000612417 A0A087X0M5 115 aa11.96□□□□□ -0.49
CDH1-213ENST00000612417 MDFIC2A0A1B0GVS7 189 aa11.96□□□□□ -0.49
CDH1-213ENST00000612417 A0A1B0GX30 115 aa11.96□□□□□ -0.49
CDH1-213ENST00000612417 B9A039 149 aa11.96□□□□□ -0.49
CDH1-213ENST00000612417 MMP23AO75900 390 aa11.96□□□□□ -0.49
CDH1-213ENST00000612417 CT45A6P0DMU7 189 aa11.96□□□□□ -0.49
CDH1-213ENST00000612417 CT45A5P0DMU8 189 aa11.96□□□□□ -0.49
CDH1-213ENST00000612417 CT45A7P0DMV0 189 aa11.96□□□□□ -0.49
CDH1-213ENST00000612417 AREGP15514 252 aa11.96□□□□□ -0.49
CDH1-213ENST00000612417 PAX1P15863 534 aa11.96□□□□□ -0.49
CDH1-213ENST00000612417 G0S2P27469 103 aa11.96□□□□□ -0.49
CDH1-213ENST00000612417 MISP3Q96FF7 219 aa11.96□□□□□ -0.49
CDH1-213ENST00000612417 PLEKHA3Q9HB20 300 aa11.96□□□□□ -0.49
CDH1-213ENST00000612417 SLC25A10Q9UBX3 287 aaPredicted RBP11.96□□□□□ -0.49
CDH1-213ENST00000612417 LINC00312Q9Y6C7 94 aa11.96□□□□□ -0.49
CDH1-213ENST00000612417 LY96Q9Y6Y9 160 aa11.96□□□□□ -0.49
CDH1-213ENST00000612417 hADV38S2A0JD32 116 aa11.96□□□□□ -0.5
CDH1-213ENST00000612417 C9JCJ5 164 aa11.96□□□□□ -0.5
CDH1-213ENST00000612417 J3QR06 171 aa11.96□□□□□ -0.5
CDH1-213ENST00000612417 LINC00869P0C866 280 aa11.96□□□□□ -0.5
CDH1-213ENST00000612417 TMEM37Q8WXS4 190 aa11.96□□□□□ -0.5
CDH1-213ENST00000612417 CCL17Q92583 94 aa11.96□□□□□ -0.5
CDH1-213ENST00000612417 AURKAIP1Q9NWT8 199 aaPredicted RBP11.96□□□□□ -0.5
CDH1-213ENST00000612417 FKBP11Q9NYL4 201 aa11.96□□□□□ -0.5
CDH1-213ENST00000612417 BET1LQ9NYM9 111 aa11.96□□□□□ -0.5
CDH1-213ENST00000612417 PGPEP1LA6NFU8 196 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 GZMBP10144 247 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 IGFBP2P18065 325 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 RPL31P62899 125 aaKnown RBP11.95□□□□□ -0.5
CDH1-213ENST00000612417 GAGE1Q13065 139 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 ZNF672Q499Z4 452 aaPredicted RBP11.95□□□□□ -0.5
CDH1-213ENST00000612417 SPATA31B1PQ5VZV4 182 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 TEX38Q6PEX7 206 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 MUC15Q8N387 334 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 SLC35D1Q9NTN3 355 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 SLC45A2Q9UMX9 530 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 USP24Q9UPU5 2620 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 TRAV9-1A0A075B6T8 112 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 IGKV1-16P04430 117 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 CNN1P51911 297 aaKnown RBP11.95□□□□□ -0.5
CDH1-213ENST00000612417 C2orf83Q53S99 150 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 C16orf54Q6UWD8 224 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 ZNF833PQ6ZTB9 187 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 OR5B3Q8NH48 314 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 SGMS2Q8NHU3 365 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 OCC1Q8TAD7 63 aa11.95□□□□□ -0.5
CDH1-213ENST00000612417 CFAP46Q8IYW2 2715 aa11.94□□□□□ -0.5
CDH1-213ENST00000612417 A0A0U1RQK1 487 aa11.94□□□□□ -0.5
CDH1-213ENST00000612417 ZNF320A2RRD8 509 aa11.94□□□□□ -0.5
CDH1-213ENST00000612417 SRRM4A7MD48 611 aaKnown RBP11.94□□□□□ -0.5
CDH1-213ENST00000612417 GCGP01275 180 aa11.94□□□□□ -0.5
CDH1-213ENST00000612417 MYOD1P15172 320 aa11.94□□□□□ -0.5
CDH1-213ENST00000612417 MEF2CQ06413 473 aaPredicted RBP11.94□□□□□ -0.5
CDH1-213ENST00000612417 MAJINQ3KP22 176 aa11.94□□□□□ -0.5
CDH1-213ENST00000612417 PNKDQ8N490 385 aa11.94□□□□□ -0.5
CDH1-213ENST00000612417 OR1L8Q8NGR8 309 aa11.94□□□□□ -0.5
CDH1-213ENST00000612417 SLC35E1Q96K37 410 aa11.94□□□□□ -0.5
CDH1-213ENST00000612417 UHRF2Q96PU4 802 aa11.94□□□□□ -0.5
CDH1-213ENST00000612417 NKX6-3A6NJ46 265 aa11.93□□□□□ -0.5
CDH1-213ENST00000612417 BEND2Q8NDZ0 799 aa11.93□□□□□ -0.5
CDH1-213ENST00000612417 OR10G8Q8NGN5 311 aa11.93□□□□□ -0.5
CDH1-213ENST00000612417 OSR1Q8TAX0 266 aaPredicted RBP11.93□□□□□ -0.5
CDH1-213ENST00000612417 ITLN2Q8WWU7 325 aaPredicted RBP11.93□□□□□ -0.5
CDH1-213ENST00000612417 TMEM18Q96B42 140 aa11.93□□□□□ -0.5
CDH1-213ENST00000612417 C19orf24Q9BVV8 132 aa11.93□□□□□ -0.5
CDH1-213ENST00000612417 HINT2Q9BX68 163 aa11.93□□□□□ -0.5
CDH1-213ENST00000612417 GAL3ST2Q9H3Q3 398 aa11.93□□□□□ -0.5
CDH1-213ENST00000612417 TEX50A0A1B0GTY4 177 aa11.93□□□□□ -0.5
CDH1-213ENST00000612417 CIDEAO60543 219 aa11.93□□□□□ -0.5
CDH1-213ENST00000612417 FOXH1O75593 365 aa11.93□□□□□ -0.5
CDH1-213ENST00000612417 YPEL3P61236 119 aaPredicted RBP11.93□□□□□ -0.5
CDH1-213ENST00000612417 OR4P4Q8NGL7 312 aa11.93□□□□□ -0.5
CDH1-213ENST00000612417 TMEM167BQ9NRX6 74 aa11.93□□□□□ -0.5
CDH1-213ENST00000612417 TMEM106BQ9NUM4 274 aa11.93□□□□□ -0.5
CDH1-213ENST00000612417 TRAPPC1Q9Y5R8 145 aa11.93□□□□□ -0.5
CDH1-213ENST00000612417 PPIAL4EA0A075B759 164 aa11.92□□□□□ -0.5
CDH1-213ENST00000612417 IGKV1OR2-108A0A075B7D4 117 aa11.92□□□□□ -0.5
CDH1-213ENST00000612417 PPIAL4DF5H284 164 aa11.92□□□□□ -0.5
CDH1-213ENST00000612417 INS-IGF2F8WCM5 200 aa11.92□□□□□ -0.5
CDH1-213ENST00000612417 TMEM178BH3BS89 294 aa11.92□□□□□ -0.5
CDH1-213ENST00000612417 SAA1P0DJI8 122 aaPredicted RBP11.92□□□□□ -0.5
CDH1-213ENST00000612417 PPIAL4FP0DN26 164 aa11.92□□□□□ -0.5
CDH1-213ENST00000612417 PRSS8Q16651 343 aa11.92□□□□□ -0.5
CDH1-213ENST00000612417 MIR17HGQ75NE6 70 aa11.92□□□□□ -0.5
CDH1-213ENST00000612417 GBGT1Q8N5D6 347 aa11.92□□□□□ -0.5
CDH1-213ENST00000612417 NABP2Q9BQ15 211 aa11.92□□□□□ -0.5
CDH1-213ENST00000612417 GOLT1BQ9Y3E0 138 aa11.92□□□□□ -0.5
CDH1-213ENST00000612417 PPIAL4AQ9Y536 164 aa11.92□□□□□ -0.5
CDH1-213ENST00000612417 K7EN84 100 aa11.91□□□□□ -0.5
CDH1-213ENST00000612417 RNASE2P10153 161 aaKnown RBP11.91□□□□□ -0.5
CDH1-213ENST00000612417 IGHV1-69-2A0A0G2JMI3 117 aa11.91□□□□□ -0.5
CDH1-213ENST00000612417 OR5G3P0C626 314 aa11.91□□□□□ -0.5
CDH1-213ENST00000612417 LOXP28300 417 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms