RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 MT-CO2P00403 227 aa13.11□□□□□ -0.31
SSBP1-215ENST00000612337 UCP3P55916 312 aa13.11□□□□□ -0.31
SSBP1-215ENST00000612337 CMC4P56277 68 aaPredicted RBP13.11□□□□□ -0.31
SSBP1-215ENST00000612337 APRG1Q8IVJ8 170 aa13.11□□□□□ -0.31
SSBP1-215ENST00000612337 NAA50Q9GZZ1 169 aaKnown RBP13.11□□□□□ -0.31
SSBP1-215ENST00000612337 KLK5Q9Y337 293 aaPredicted RBP13.11□□□□□ -0.31
SSBP1-215ENST00000612337 TRAV14DV4A0A0A6YYC5 116 aa13.1□□□□□ -0.31
SSBP1-215ENST00000612337 HPGDSO60760 199 aa13.1□□□□□ -0.31
SSBP1-215ENST00000612337 GABARAPO95166 117 aa13.1□□□□□ -0.31
SSBP1-215ENST00000612337 ELK1P19419 428 aa13.1□□□□□ -0.31
SSBP1-215ENST00000612337 RCVRNP35243 200 aa13.1□□□□□ -0.31
SSBP1-215ENST00000612337 HSPE1P61604 102 aaKnown RBP13.1□□□□□ -0.31
SSBP1-215ENST00000612337 SNX29P2Q8IUI4 249 aa13.1□□□□□ -0.31
SSBP1-215ENST00000612337 MRGPRFQ96AM1 343 aa13.1□□□□□ -0.31
SSBP1-215ENST00000612337 DNAH6Q9C0G6 4158 aa13.1□□□□□ -0.31
SSBP1-215ENST00000612337 IGHV3-49A0A0A0MS15 119 aa13.09□□□□□ -0.31
SSBP1-215ENST00000612337 ERHP84090 104 aaKnown RBP13.09□□□□□ -0.31
SSBP1-215ENST00000612337 FAM90A2PQ658T7 463 aa13.09□□□□□ -0.31
SSBP1-215ENST00000612337 CSTL1Q9H114 145 aa13.09□□□□□ -0.31
SSBP1-215ENST00000612337 MPTX1A8MV57 137 aa13.08□□□□□ -0.32
SSBP1-215ENST00000612337 GNG7O60262 68 aa13.08□□□□□ -0.32
SSBP1-215ENST00000612337 IGHV3-48P01763 117 aa13.08□□□□□ -0.32
SSBP1-215ENST00000612337 TFPI2P48307 235 aa13.08□□□□□ -0.32
SSBP1-215ENST00000612337 ZNF124Q15973 351 aa13.08□□□□□ -0.32
SSBP1-215ENST00000612337 GPR107Q5VW38 600 aa13.08□□□□□ -0.32
SSBP1-215ENST00000612337 MZT2AQ6P582 158 aa13.08□□□□□ -0.32
SSBP1-215ENST00000612337 GATAD1Q8WUU5 269 aa13.08□□□□□ -0.32
SSBP1-215ENST00000612337 PINX1Q96BK5 328 aaKnown RBP13.08□□□□□ -0.32
SSBP1-215ENST00000612337 GINS3Q9BRX5 216 aa13.08□□□□□ -0.32
SSBP1-215ENST00000612337 MRPS26Q9BYN8 205 aaKnown RBP13.08□□□□□ -0.32
SSBP1-215ENST00000612337 IGKV3-7A0A075B6H7 116 aa13.07□□□□□ -0.32
SSBP1-215ENST00000612337 IGHV3OR16-13A0A075B7E8 117 aa13.07□□□□□ -0.32
SSBP1-215ENST00000612337 IGHV3-74A0A0B4J1X5 117 aa13.07□□□□□ -0.32
SSBP1-215ENST00000612337 CD5P06127 495 aa13.07□□□□□ -0.32
SSBP1-215ENST00000612337 ZNF182P17025 639 aaPredicted RBP13.07□□□□□ -0.32
SSBP1-215ENST00000612337 ALDH3B2P48448 385 aa13.07□□□□□ -0.32
SSBP1-215ENST00000612337 RND3P61587 244 aa13.07□□□□□ -0.32
SSBP1-215ENST00000612337 TOMM20LQ6UXN7 152 aa13.07□□□□□ -0.32
SSBP1-215ENST00000612337 AP3S1Q92572 193 aa13.07□□□□□ -0.32
SSBP1-215ENST00000612337 NPBWR1P48145 328 aa13.06□□□□□ -0.32
SSBP1-215ENST00000612337 PAFAH1B2P68402 229 aa13.06□□□□□ -0.32
SSBP1-215ENST00000612337 TCF24Q7RTU0 167 aa13.06□□□□□ -0.32
SSBP1-215ENST00000612337 GBGT1Q8N5D6 347 aa13.06□□□□□ -0.32
SSBP1-215ENST00000612337 PHLDA1Q8WV24 401 aaPredicted RBP13.06□□□□□ -0.32
SSBP1-215ENST00000612337 ZNF486Q96H40 463 aaPredicted RBP13.06□□□□□ -0.32
SSBP1-215ENST00000612337 VSIRQ9H7M9 311 aa13.06□□□□□ -0.32
SSBP1-215ENST00000612337 FAM25AB3EWG3 89 aa13.05□□□□□ -0.32
SSBP1-215ENST00000612337 FAM25CB3EWG5 89 aa13.05□□□□□ -0.32
SSBP1-215ENST00000612337 FAM25GB3EWG6 89 aa13.05□□□□□ -0.32
SSBP1-215ENST00000612337 INS-IGF2F8WCM5 200 aa13.05□□□□□ -0.32
SSBP1-215ENST00000612337 M0QYG6 137 aa13.05□□□□□ -0.32
SSBP1-215ENST00000612337 IZUMO4Q1ZYL8 232 aa13.05□□□□□ -0.32
SSBP1-215ENST00000612337 SPINK9Q5DT21 86 aa13.05□□□□□ -0.32
SSBP1-215ENST00000612337 GPR141Q7Z602 305 aa13.05□□□□□ -0.32
SSBP1-215ENST00000612337 LHFPL1Q86WI0 220 aa13.05□□□□□ -0.32
SSBP1-215ENST00000612337 DUSP18Q8NEJ0 188 aa13.05□□□□□ -0.32
SSBP1-215ENST00000612337 ST8SIA2Q92186 375 aa13.05□□□□□ -0.32
SSBP1-215ENST00000612337 RARRES2Q99969 163 aa13.05□□□□□ -0.32
SSBP1-215ENST00000612337 A0A0B4J293 547 aa13.04□□□□□ -0.32
SSBP1-215ENST00000612337 IGKV1-5P01602 117 aa13.04□□□□□ -0.32
SSBP1-215ENST00000612337 P0C879 139 aa13.04□□□□□ -0.32
SSBP1-215ENST00000612337 PGAM2P15259 253 aa13.04□□□□□ -0.32
SSBP1-215ENST00000612337 SNCAP37840 140 aa13.04□□□□□ -0.32
SSBP1-215ENST00000612337 PVRIGQ6DKI7 326 aa13.04□□□□□ -0.32
SSBP1-215ENST00000612337 ZNF600Q6ZNG1 722 aa13.04□□□□□ -0.32
SSBP1-215ENST00000612337 C11orf68Q9H3H3 251 aaKnown RBP13.04□□□□□ -0.32
SSBP1-215ENST00000612337 PUS1Q9Y606 427 aaKnown RBP eCLIP13.04□□□□□ -0.32
SSBP1-215ENST00000612337 HECTD4Q9Y4D8 3996 aa13.04□□□□□ -0.32
SSBP1-215ENST00000612337 ST8SIA3O43173 380 aa13.03□□□□□ -0.32
SSBP1-215ENST00000612337 ATG12O94817 140 aa13.03□□□□□ -0.32
SSBP1-215ENST00000612337 APOHP02749 345 aaPredicted RBP13.03□□□□□ -0.32
SSBP1-215ENST00000612337 PI3P19957 117 aa13.03□□□□□ -0.32
SSBP1-215ENST00000612337 AKR1C2P52895 323 aa13.03□□□□□ -0.32
SSBP1-215ENST00000612337 PIGPP57054 158 aa13.03□□□□□ -0.32
SSBP1-215ENST00000612337 LILRB2Q8N423 598 aa13.03□□□□□ -0.32
SSBP1-215ENST00000612337 ARRDC1Q8N5I2 433 aa13.03□□□□□ -0.32
SSBP1-215ENST00000612337 SLC35G3Q8N808 338 aa13.03□□□□□ -0.32
SSBP1-215ENST00000612337 TP53RKQ96S44 253 aa13.03□□□□□ -0.32
SSBP1-215ENST00000612337 MS4A6AQ9H2W1 248 aa13.03□□□□□ -0.32
SSBP1-215ENST00000612337 ZFAND3Q9H8U3 227 aa13.03□□□□□ -0.32
SSBP1-215ENST00000612337 TRAV2A0A0B4J234 112 aa13.02□□□□□ -0.33
SSBP1-215ENST00000612337 DNASE2O00115 360 aaPredicted RBP13.02□□□□□ -0.33
SSBP1-215ENST00000612337 CORTO00230 105 aa13.02□□□□□ -0.33
SSBP1-215ENST00000612337 DFFBO76075 338 aa13.02□□□□□ -0.33
SSBP1-215ENST00000612337 TMEM50AO95807 157 aa13.02□□□□□ -0.33
SSBP1-215ENST00000612337 IFNA17P01571 189 aa13.02□□□□□ -0.33
SSBP1-215ENST00000612337 RNASE10Q5GAN6 216 aaKnown RBP13.02□□□□□ -0.33
SSBP1-215ENST00000612337 OR11H2Q8NH07 326 aa13.02□□□□□ -0.33
SSBP1-215ENST00000612337 MFFQ9GZY8 342 aa13.02□□□□□ -0.33
SSBP1-215ENST00000612337 TMEM231Q9H6L2 316 aa13.02□□□□□ -0.33
SSBP1-215ENST00000612337 EXTL2Q9UBQ6 330 aa13.02□□□□□ -0.33
SSBP1-215ENST00000612337 KLK11Q9UBX7 282 aa13.02□□□□□ -0.33
SSBP1-215ENST00000612337 C3orf85A0A1B0GTC6 90 aa13.01□□□□□ -0.33
SSBP1-215ENST00000612337 CA1P00915 261 aaPredicted RBP13.01□□□□□ -0.33
SSBP1-215ENST00000612337 CD3DP04234 171 aa13.01□□□□□ -0.33
SSBP1-215ENST00000612337 TBPP20226 339 aa13.01□□□□□ -0.33
SSBP1-215ENST00000612337 SUB1P53999 127 aaKnown RBP eCLIP13.01□□□□□ -0.333e-6■□□□□ 11
SSBP1-215ENST00000612337 RNASE12Q5GAN4 147 aaKnown RBP13.01□□□□□ -0.33
SSBP1-215ENST00000612337 LGALS9CQ6DKI2 356 aa13.01□□□□□ -0.33
SSBP1-215ENST00000612337 RPP25LQ8N5L8 163 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms