RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ZZEF1O43149 2961 aa11.48□□□□□ -0.57
COL6A1-207ENST00000612273 GPR6P46095 362 aaPredicted RBP11.48□□□□□ -0.57
COL6A1-207ENST00000612273 UBE2L3P68036 154 aaKnown RBP11.48□□□□□ -0.57
COL6A1-207ENST00000612273 MBNL2Q5VZF2 373 aaKnown RBP11.48□□□□□ -0.57
COL6A1-207ENST00000612273 HARBI1Q96MB7 349 aa11.48□□□□□ -0.57
COL6A1-207ENST00000612273 VAMP8Q9BV40 100 aa11.48□□□□□ -0.57
COL6A1-207ENST00000612273 COMMD5Q9GZQ3 224 aa11.48□□□□□ -0.57
COL6A1-207ENST00000612273 ZNF355PQ9NSJ1 428 aa11.48□□□□□ -0.57
COL6A1-207ENST00000612273 IGLV1-44P01699 117 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 CT45A6P0DMU7 189 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 CT45A5P0DMU8 189 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 CT45A7P0DMV0 189 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 CD99P14209 185 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 CD24P25063 80 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 ZNF124Q15973 351 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 TRAT1Q6PIZ9 186 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 DDB2Q92466 427 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 CCL17Q92583 94 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 MRPL20Q9BYC9 149 aaKnown RBP11.47□□□□□ -0.57
COL6A1-207ENST00000612273 DYSFO75923 2080 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 ENSAO43768 121 aaKnown RBP11.47□□□□□ -0.57
COL6A1-207ENST00000612273 C1orf194Q5T5A4 169 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 WFDC8Q8IUA0 241 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 ZNF503Q96F45 646 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 SSBP4Q9BWG4 385 aaPredicted RBP11.47□□□□□ -0.57
COL6A1-207ENST00000612273 TMEM14BQ9NUH8 114 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 RNF7Q9UBF6 113 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 TBL2Q9Y4P3 447 aaKnown RBP11.47□□□□□ -0.57
COL6A1-207ENST00000612273 V9GYV3 84 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 TEX50A0A1B0GTY4 177 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 K7EM74 188 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 F2RL2O00254 374 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 RANP62826 216 aaKnown RBP11.47□□□□□ -0.57
COL6A1-207ENST00000612273 GNG5P63218 68 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 HCP5Q6MZN7 132 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 IL19Q9UHD0 177 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 FBXL7Q9UJT9 491 aa11.47□□□□□ -0.57
COL6A1-207ENST00000612273 ATRXP46100 2492 aa11.46□□□□□ -0.57
COL6A1-207ENST00000612273 ORM2P19652 201 aa11.46□□□□□ -0.57
COL6A1-207ENST00000612273 RAB7AP51149 207 aa11.46□□□□□ -0.57
COL6A1-207ENST00000612273 SELENOVP59797 346 aa11.46□□□□□ -0.57
COL6A1-207ENST00000612273 PLA2G2CQ5R387 149 aa11.46□□□□□ -0.57
COL6A1-207ENST00000612273 IBA57Q5T440 356 aaKnown RBP11.46□□□□□ -0.57
COL6A1-207ENST00000612273 STUMQ69YW2 141 aa11.46□□□□□ -0.57
COL6A1-207ENST00000612273 LCN12Q6JVE5 192 aa11.46□□□□□ -0.57
COL6A1-207ENST00000612273 SLC45A2Q9UMX9 530 aa11.46□□□□□ -0.57
COL6A1-207ENST00000612273 GUSBP1Q15486 140 aa11.46□□□□□ -0.58
COL6A1-207ENST00000612273 NPIPB3Q92617 1050 aa11.46□□□□□ -0.58
COL6A1-207ENST00000612273 TUBG2Q9NRH3 451 aa11.46□□□□□ -0.58
COL6A1-207ENST00000612273 ZNF891A8MT65 544 aaPredicted RBP11.45□□□□□ -0.58
COL6A1-207ENST00000612273 IGHV1-46P01743 117 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 FTH1P19P0C7X4 201 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 PRR20EP86478 221 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 PRR20CP86479 221 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 PRR20DP86480 221 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 PRR20BP86481 221 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 PRR20AP86496 221 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 DNLZQ5SXM8 178 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 OR52E5Q8NH55 327 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 TECRQ9NZ01 308 aaKnown RBP11.45□□□□□ -0.58
COL6A1-207ENST00000612273 COL6A6A6NMZ7 2263 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 MOSP00540 346 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 YPEL3P61236 119 aaPredicted RBP11.45□□□□□ -0.58
COL6A1-207ENST00000612273 MZT1Q08AG7 82 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 RTL8BQ17RB0 113 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 LEMD1Q68G75 181 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 PTPRBP23467 1997 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 DIRC3C9JPN6 131 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 MAJINQ3KP22 176 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 TPTE2P1Q5T6R2 138 aa11.45□□□□□ -0.58
COL6A1-207ENST00000612273 MFAP2P55001 183 aa11.44□□□□□ -0.58
COL6A1-207ENST00000612273 BEND2Q8NDZ0 799 aa11.44□□□□□ -0.58
COL6A1-207ENST00000612273 ASCL2Q99929 193 aa11.44□□□□□ -0.58
COL6A1-207ENST00000612273 FOXA2Q9Y261 457 aaPredicted RBP11.44□□□□□ -0.58
COL6A1-207ENST00000612273 COL27A1Q8IZC6 1860 aaPredicted RBP11.44□□□□□ -0.58
COL6A1-207ENST00000612273 A0A1W2PN81 502 aa11.44□□□□□ -0.58
COL6A1-207ENST00000612273 GAFA1Q96PS6 74 aa11.44□□□□□ -0.58
COL6A1-207ENST00000612273 GSX1Q9H4S2 264 aaPredicted RBP11.44□□□□□ -0.58
COL6A1-207ENST00000612273 UPK2O00526 184 aa11.43□□□□□ -0.58
COL6A1-207ENST00000612273 PAX1P15863 534 aa11.43□□□□□ -0.58
COL6A1-207ENST00000612273 GLRXP35754 106 aa11.43□□□□□ -0.58
COL6A1-207ENST00000612273 TMPRSS3P57727 454 aa11.43□□□□□ -0.58
COL6A1-207ENST00000612273 C1orf162Q8NEQ5 155 aaPredicted RBP11.43□□□□□ -0.58
COL6A1-207ENST00000612273 OR10X1Q8NGY0 326 aa11.43□□□□□ -0.58
COL6A1-207ENST00000612273 TMEM68Q96MH6 324 aa11.43□□□□□ -0.58
COL6A1-207ENST00000612273 TPSG1Q9NRR2 321 aa11.43□□□□□ -0.58
COL6A1-207ENST00000612273 PRNDQ9UKY0 176 aa11.43□□□□□ -0.58
COL6A1-207ENST00000612273 COX7A2P2O60397 106 aa11.43□□□□□ -0.58
COL6A1-207ENST00000612273 TDGF1P3P51864 188 aa11.43□□□□□ -0.58
COL6A1-207ENST00000612273 NRN1Q9NPD7 142 aa11.43□□□□□ -0.58
COL6A1-207ENST00000612273 MRPL36Q9P0J6 103 aaKnown RBP11.43□□□□□ -0.58
COL6A1-207ENST00000612273 M0QZ24 198 aa11.43□□□□□ -0.58
COL6A1-207ENST00000612273 SLC25A17O43808 307 aa11.43□□□□□ -0.58
COL6A1-207ENST00000612273 USF1P22415 310 aaPredicted RBP11.43□□□□□ -0.58
COL6A1-207ENST00000612273 NEUROG1Q92886 237 aa11.43□□□□□ -0.58
COL6A1-207ENST00000612273 ZNF586Q9NXT0 402 aa11.43□□□□□ -0.58
COL6A1-207ENST00000612273 ZNF292O60281 2723 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 TRGV8A0A0C4DH27 118 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 CORTO00230 105 aa11.42□□□□□ -0.58
COL6A1-207ENST00000612273 AREGP15514 252 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms