RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 CD69Q07108 199 aa9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 SRSF9Q13242 221 aaKnown RBP eCLIP9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 RALYQ9UKM9 306 aaKnown RBP9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 FOXA2Q9Y261 457 aaPredicted RBP9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 LOC102724200A0A096LPH7 203 aaPredicted RBP9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 A0A1B0GUT8 65 aa9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 C9orf172C9J069 976 aa9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 FOXF2Q12947 444 aa9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 MRPL52Q86TS9 123 aaKnown RBP9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 C9orf106Q8NAJ2 232 aa9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 ZNF257Q9Y2Q1 563 aa9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 NUTF2P61970 127 aaKnown RBP9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 ZNF124Q15973 351 aa9.08□□□□□ -0.96
CDC42EP3-206ENST00000611976 IGHV1-69-2A0A0G2JMI3 117 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 PSPNO60542 156 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 MGPP08493 103 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 CD40P25942 277 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 FAM201AQ5SY85 155 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 ANOS1P23352 680 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 TMEM238LA0A1B0GVL6 79 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 A6NJY4 79 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 Q6ZRM9 215 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 COLCA1Q6ZS62 124 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 C5orf24Q7Z6I8 188 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 LYPD6BQ8NI32 183 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 TRAV9-2A0A087WT02 112 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 IGLV3-1P01715 115 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 IL4P05112 153 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 FAM106CPP0CH98 169 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 KHDC1LQ5JSQ8 128 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 MGST2Q99735 147 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 SPRR3Q9UBC9 169 aa9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 KLF2Q9Y5W3 355 aaPredicted RBP9.07□□□□□ -0.96
CDC42EP3-206ENST00000611976 FANCMQ8IYD8 2048 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 NUP210Q8TEM1 1887 aaPredicted RBP9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 TCRBV4S1A1TA0A5B7 111 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 SRRM5B3KS81 715 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 TCTAP57738 103 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 ATP5L2Q7Z4Y8 100 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 METTL26Q96S19 204 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 Q9H3A6 140 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 DENND4CQ5VZ89 1909 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 AHCTF1Q8WYP5 2266 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 IL18BPO95998 194 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 PLP1P60201 277 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 PSMG4Q5JS54 123 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 MBNL2Q5VZF2 373 aaKnown RBP9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 OTORQ9NRC9 128 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 MPDZO75970 2070 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 A1L4Q6 167 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 APOHP02749 345 aaPredicted RBP9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 GPR6P46095 362 aaPredicted RBP9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 RELQ04864 619 aaPredicted RBP9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 Q0VFX4 171 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 RASL11AQ6T310 242 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 CIARTQ8N365 385 aaPredicted RBP9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 TEX45Q8NA69 505 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 LIME1Q9H400 295 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 DNAH12Q6ZR08 3092 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 IGKV1-6A0A0C4DH72 117 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 IGHV2-70P01814 119 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 GZMBP10144 247 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 ZNF841Q6ZN19 808 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 TMEM136Q6ZRR5 245 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 DERL1Q9BUN8 251 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 EPDR1Q9UM22 224 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 RNF115Q9Y4L5 304 aa9.06□□□□□ -0.96
CDC42EP3-206ENST00000611976 TFF1P04155 84 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 GCSHP23434 173 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 C20orf204Q6ZNR8 217 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 ERASQ7Z444 233 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 ZNF414Q96IQ9 312 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 B9A039 149 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 C2orf83Q53S99 150 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 MUC15Q8N387 334 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 TMEM190Q8WZ59 177 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 PRELID3AQ96N28 172 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 IGHV1-18A0A0C4DH31 117 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 FBLL1A6NHQ2 334 aaKnown RBP9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 NUDT3O95989 172 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 PSMB2P49721 201 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 ZNF585BQ52M93 769 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 BMPERQ8N8U9 685 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 TSKUQ8WUA8 353 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 CEP350Q5VT06 3117 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 J3KRW8 73 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 AREGP15514 252 aa9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 COLQQ9Y215 455 aaPredicted RBP9.05□□□□□ -0.96
CDC42EP3-206ENST00000611976 SDK2Q58EX2 2172 aa9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 PAX9P55771 341 aa9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 TICRRQ7Z2Z1 1910 aa9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 C15orf62A8K5M9 175 aa9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 FOXI3A8MTJ6 420 aaPredicted RBP9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 LILRA1O75019 489 aa9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 CX3CL1P78423 397 aa9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 ZNF664Q8N3J9 261 aa9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 OR10J6PQ8NGY7 276 aa9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 CHCHD1Q96BP2 118 aaKnown RBP9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 NDUFS6O75380 124 aaKnown RBP9.04□□□□□ -0.96
CDC42EP3-206ENST00000611976 PFN1P07737 140 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms