RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 GAFA1Q96PS6 74 aa10.84□□□□□ -0.67
TCF3-220ENST00000611869 TMEM178BH3BS89 294 aa10.84□□□□□ -0.67
TCF3-220ENST00000611869 IGKV1-39P01597 117 aa10.84□□□□□ -0.67
TCF3-220ENST00000611869 IGKV1D-39P04432 117 aa10.84□□□□□ -0.67
TCF3-220ENST00000611869 FAM215AQ9Y5M1 114 aa10.84□□□□□ -0.67
TCF3-220ENST00000611869 TLN1Q9Y490 2541 aaKnown RBP10.84□□□□□ -0.67
TCF3-220ENST00000611869 A0A087X0M5 115 aa10.84□□□□□ -0.67
TCF3-220ENST00000611869 A0A1B0GX30 115 aa10.84□□□□□ -0.67
TCF3-220ENST00000611869 CBLN1P23435 193 aa10.84□□□□□ -0.67
TCF3-220ENST00000611869 LMO1P25800 156 aa10.84□□□□□ -0.67
TCF3-220ENST00000611869 PRCDQ00LT1 54 aa10.84□□□□□ -0.67
TCF3-220ENST00000611869 TUBA4BQ9H853 241 aa10.84□□□□□ -0.67
TCF3-220ENST00000611869 COLCA2A8K830 154 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 WISP2O76076 250 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 IL4P05112 153 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 DUX4L9Q6RFH8 374 aaPredicted RBP10.83□□□□□ -0.68
TCF3-220ENST00000611869 C5orf17Q8NAS9 161 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 MRPL32Q9BYC8 188 aaKnown RBP10.83□□□□□ -0.68
TCF3-220ENST00000611869 M0R2Z0 102 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 LY6HO94772 140 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 IL15RAQ13261 267 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 GBGT1Q8N5D6 347 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 MRPL18Q9H0U6 180 aaKnown RBP10.83□□□□□ -0.68
TCF3-220ENST00000611869 NCOR2Q9Y618 2525 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 A0A087WWC5 75 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 A8MWL6 223 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 K7EM74 188 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 C1QTNF9P0C862 333 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 MFAP4P55083 255 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 PAX9P55771 341 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 GGTLC1Q9BX51 225 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 TEX50A0A1B0GTY4 177 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 EFNB3Q15768 340 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 CACNG8Q8WXS5 425 aa10.83□□□□□ -0.68
TCF3-220ENST00000611869 NBEAP1P0C6P0 100 aa10.82□□□□□ -0.68
TCF3-220ENST00000611869 RELBQ01201 579 aa10.82□□□□□ -0.68
TCF3-220ENST00000611869 LYPD2Q6UXB3 125 aa10.82□□□□□ -0.68
TCF3-220ENST00000611869 FAM169BQ8N8A8 192 aa10.82□□□□□ -0.68
TCF3-220ENST00000611869 IGHV3OR16-8A0A075B7F1 116 aa10.82□□□□□ -0.68
TCF3-220ENST00000611869 IGHV3-23P01764 117 aa10.82□□□□□ -0.68
TCF3-220ENST00000611869 COMPP49747 757 aaPredicted RBP10.82□□□□□ -0.68
TCF3-220ENST00000611869 ATP5J2P56134 94 aa10.82□□□□□ -0.68
TCF3-220ENST00000611869 ZNF672Q499Z4 452 aaPredicted RBP10.82□□□□□ -0.68
TCF3-220ENST00000611869 IGFL3Q6UXB1 125 aa10.82□□□□□ -0.68
TCF3-220ENST00000611869 PIEZO1Q92508 2521 aa10.82□□□□□ -0.68
TCF3-220ENST00000611869 IGHV3OR16-13A0A075B7E8 117 aa10.82□□□□□ -0.68
TCF3-220ENST00000611869 IGHV3-74A0A0B4J1X5 117 aa10.82□□□□□ -0.68
TCF3-220ENST00000611869 ISLRO14498 428 aa10.82□□□□□ -0.68
TCF3-220ENST00000611869 PAX6P26367 422 aa10.82□□□□□ -0.68
TCF3-220ENST00000611869 CD69Q07108 199 aa10.82□□□□□ -0.68
TCF3-220ENST00000611869 KLHDC1Q8N7A1 406 aa10.82□□□□□ -0.68
TCF3-220ENST00000611869 VN1R17PQ8TDU5 208 aa10.82□□□□□ -0.68
TCF3-220ENST00000611869 C15orf62A8K5M9 175 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 IGKV1-16P04430 117 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 TMEM183BQ1AE95 376 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 TMEM177Q53S58 311 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 GOLT1AQ6ZVE7 132 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 Q8NFD4 153 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 OR52E5Q8NH55 327 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 GRAMD2BQ96HH9 432 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.81□□□□□ -0.68
TCF3-220ENST00000611869 M0QZ24 198 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 OR2J3O76001 311 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 ELOBQ15370 118 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 PPP1R27Q86WC6 154 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 HSPB9Q9BQS6 159 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 ELOVL1Q9BW60 279 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 PAM16Q9Y3D7 125 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 IGLV1-44P01699 117 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 LY6EQ16553 131 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 SPSB3Q6PJ21 355 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 Q6ZSR3 168 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 NEU4Q8WWR8 484 aaPredicted RBP10.81□□□□□ -0.68
TCF3-220ENST00000611869 SRSF12Q8WXF0 261 aaKnown RBP10.81□□□□□ -0.68
TCF3-220ENST00000611869 SLC25A33Q9BSK2 321 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 TRAV1-1A0A0B4J248 108 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 FAM90A9PA6NNJ1 464 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 SPATA31B1PQ5VZV4 182 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 NUP37Q8NFH4 326 aa10.81□□□□□ -0.68
TCF3-220ENST00000611869 FOXA2Q9Y261 457 aaPredicted RBP10.81□□□□□ -0.68
TCF3-220ENST00000611869 CEP295Q9C0D2 2601 aa10.8□□□□□ -0.68
TCF3-220ENST00000611869 RNASEH2CQ8TDP1 164 aaKnown RBP10.8□□□□□ -0.68
TCF3-220ENST00000611869 IMMP2LQ96T52 175 aa10.8□□□□□ -0.68
TCF3-220ENST00000611869 CEP192Q8TEP8 1941 aa10.8□□□□□ -0.68
TCF3-220ENST00000611869 PYYP10082 97 aa10.8□□□□□ -0.68
TCF3-220ENST00000611869 RIGQ13278 110 aa10.8□□□□□ -0.68
TCF3-220ENST00000611869 MT-ND6P03923 174 aa10.8□□□□□ -0.68
TCF3-220ENST00000611869 HNRNPA3P51991 378 aaKnown RBP10.8□□□□□ -0.68
TCF3-220ENST00000611869 LEMD1Q68G75 181 aa10.8□□□□□ -0.68
TCF3-220ENST00000611869 TBX15Q96SF7 602 aa10.8□□□□□ -0.68
TCF3-220ENST00000611869 WNT10AQ9GZT5 417 aa10.8□□□□□ -0.68
TCF3-220ENST00000611869 SEPSECSQ9HD40 501 aaKnown RBP10.8□□□□□ -0.68
TCF3-220ENST00000611869 UFC1Q9Y3C8 167 aa10.8□□□□□ -0.68
TCF3-220ENST00000611869 LAMA2P24043 3122 aaKnown RBP10.8□□□□□ -0.68
TCF3-220ENST00000611869 CGB1A6NKQ9 187 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 CXCL1P09341 107 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 IGHV1-8P0DP01 117 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 PF4V1P10720 104 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 KRTAP27-1Q3LI81 207 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 LHFPL4Q7Z7J7 247 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms