RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	TREML4	Q6UXN2	200 aa		11.31	□□□□□ -0.6
COPS7B-223	ENST00000611614	NAGK	Q9UJ70	344 aa		11.31	□□□□□ -0.6
COPS7B-223	ENST00000611614	FOXA2	Q9Y261	457 aa	Predicted RBP	11.31	□□□□□ -0.6
COPS7B-223	ENST00000611614		M0QZK8	103 aa		11.31	□□□□□ -0.6
COPS7B-223	ENST00000611614	EREG	O14944	169 aa		11.31	□□□□□ -0.6
COPS7B-223	ENST00000611614	SCGB1D1	O95968	90 aa		11.31	□□□□□ -0.6
COPS7B-223	ENST00000611614	OPRK1	P41145	380 aa		11.31	□□□□□ -0.6
COPS7B-223	ENST00000611614	YPEL3	P61236	119 aa	Predicted RBP	11.31	□□□□□ -0.6
COPS7B-223	ENST00000611614	OR4A47	Q6IF82	309 aa		11.31	□□□□□ -0.6
COPS7B-223	ENST00000611614	C11orf71	Q6IPW1	123 aa		11.31	□□□□□ -0.6
COPS7B-223	ENST00000611614	CLEC2A	Q6UVW9	174 aa		11.31	□□□□□ -0.6
COPS7B-223	ENST00000611614	ABHD12	Q8N2K0	398 aa		11.31	□□□□□ -0.6
COPS7B-223	ENST00000611614	TIMD4	Q96H15	378 aa		11.31	□□□□□ -0.6
COPS7B-223	ENST00000611614	ZNF462	Q96JM2	2506 aa		11.31	□□□□□ -0.6
COPS7B-223	ENST00000611614		A0A1W2PPV4	95 aa		11.3	□□□□□ -0.6
COPS7B-223	ENST00000611614	hADV38S2	A0JD32	116 aa		11.3	□□□□□ -0.6
COPS7B-223	ENST00000611614	COL8A2	P25067	703 aa		11.3	□□□□□ -0.6
COPS7B-223	ENST00000611614	HSPE1	P61604	102 aa	Known RBP	11.3	□□□□□ -0.6
COPS7B-223	ENST00000611614	SFRP2	Q96HF1	295 aa		11.3	□□□□□ -0.6
COPS7B-223	ENST00000611614	DSCAML1	Q8TD84	2053 aa		11.3	□□□□□ -0.6
COPS7B-223	ENST00000611614	SPTAN1	Q13813	2472 aa	Known RBP	11.3	□□□□□ -0.6
COPS7B-223	ENST00000611614	GNG10	P50151	68 aa		11.3	□□□□□ -0.6
COPS7B-223	ENST00000611614	PAFAH1B2	P68402	229 aa		11.3	□□□□□ -0.6
COPS7B-223	ENST00000611614	POU2AF1	Q16633	256 aa		11.3	□□□□□ -0.6
COPS7B-223	ENST00000611614	CST9LP1	Q5W188	147 aa		11.3	□□□□□ -0.6
COPS7B-223	ENST00000611614	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.3	□□□□□ -0.6
COPS7B-223	ENST00000611614	MS4A10	Q96PG2	267 aa		11.3	□□□□□ -0.6
COPS7B-223	ENST00000611614	TMEM14B	Q9NUH8	114 aa		11.3	□□□□□ -0.6
COPS7B-223	ENST00000611614	RPUSD1	Q9UJJ7	312 aa	Known RBP	11.3	□□□□□ -0.6
COPS7B-223	ENST00000611614	LYNX1	G3V0Z9	82 aa		11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	LYNX1	P0DP58	116 aa		11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	DEFA4	P12838	97 aa		11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	SELENOT	P62341	195 aa		11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	GCSAML	Q5JQS6	135 aa		11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	TEX38	Q6PEX7	206 aa		11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	MGST2	Q99735	147 aa		11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	SNHG12	Q9BXW3	62 aa		11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	TANC2	Q9HCD6	1990 aa		11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	MYO18B	Q8IUG5	2567 aa		11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	MMP23A	O75900	390 aa		11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	NDUFB4	O95168	129 aa		11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	PCP4	P48539	62 aa		11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	SLC25A48	Q6ZT89	311 aa	Known RBP	11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	OR5T1	Q8NG75	326 aa		11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	H1FX	Q92522	213 aa	Known RBP	11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	ENY2	Q9NPA8	101 aa		11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614	KAAG1	Q9UBP8	84 aa		11.29	□□□□□ -0.6
COPS7B-223	ENST00000611614		A0A1W2PPR1	153 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	FSTL3	O95633	263 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	ESD	P10768	282 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	RAB4A	P20338	218 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	ATP5G3	P48201	142 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	RPL31	P62899	125 aa	Known RBP	11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	SGMS2	Q8NHU3	365 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	GGTLC1	Q9BX51	225 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	NPVF	Q9HCQ7	196 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	LINC00312	Q9Y6C7	94 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	TET2	Q6N021	2002 aa	Predicted RBP	11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	CXorf1	O96002	111 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	NPY1R	P25929	384 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	TPPP2	P59282	170 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	MEF2C	Q06413	473 aa	Predicted RBP	11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	SLC24A4	Q8NFF2	622 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	OR10G8	Q8NGN5	311 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	CMTM2	Q8TAZ6	248 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	GAL3ST2	Q9H3Q3	398 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	LY96	Q9Y6Y9	160 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	DOPEY1	Q5JWR5	2465 aa		11.28	□□□□□ -0.6
COPS7B-223	ENST00000611614	CT45A6	P0DMU7	189 aa		11.27	□□□□□ -0.61
COPS7B-223	ENST00000611614	CT45A5	P0DMU8	189 aa		11.27	□□□□□ -0.61
COPS7B-223	ENST00000611614	CT45A7	P0DMV0	189 aa		11.27	□□□□□ -0.61
COPS7B-223	ENST00000611614	RAN	P62826	216 aa	Known RBP	11.27	□□□□□ -0.61
COPS7B-223	ENST00000611614	MIC13	Q5XKP0	118 aa		11.27	□□□□□ -0.61
COPS7B-223	ENST00000611614	LYPD2	Q6UXB3	125 aa		11.27	□□□□□ -0.61
COPS7B-223	ENST00000611614	PATZ1	Q9HBE1	687 aa	Known RBP	11.27	□□□□□ -0.61
COPS7B-223	ENST00000611614	PRND	Q9UKY0	176 aa		11.27	□□□□□ -0.61
COPS7B-223	ENST00000611614	LSM4	Q9Y4Z0	139 aa	Known RBP	11.27	□□□□□ -0.61
COPS7B-223	ENST00000611614	OR51B2	Q9Y5P1	312 aa		11.27	□□□□□ -0.61
COPS7B-223	ENST00000611614	IL6R	P08887	468 aa	Predicted RBP	11.27	□□□□□ -0.61
COPS7B-223	ENST00000611614	STAG3L2	P0CL84	134 aa		11.27	□□□□□ -0.61
COPS7B-223	ENST00000611614	STAG3L3	P0CL85	134 aa		11.27	□□□□□ -0.61
COPS7B-223	ENST00000611614	CDKN1A	P38936	164 aa		11.27	□□□□□ -0.61
COPS7B-223	ENST00000611614	RTL8B	Q17RB0	113 aa		11.27	□□□□□ -0.61
COPS7B-223	ENST00000611614	C20orf144	Q9BQM9	153 aa		11.27	□□□□□ -0.61
COPS7B-223	ENST00000611614	CA2	P00918	260 aa		11.26	□□□□□ -0.61
COPS7B-223	ENST00000611614	UBE2G2	P60604	165 aa		11.26	□□□□□ -0.61
COPS7B-223	ENST00000611614	PRSS8	Q16651	343 aa		11.26	□□□□□ -0.61
COPS7B-223	ENST00000611614	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.26	□□□□□ -0.61
COPS7B-223	ENST00000611614	TMEM256	Q8N2U0	113 aa		11.26	□□□□□ -0.61
COPS7B-223	ENST00000611614	C1orf159	Q96HA4	380 aa		11.26	□□□□□ -0.61
COPS7B-223	ENST00000611614	SLC35D1	Q9NTN3	355 aa		11.26	□□□□□ -0.61
COPS7B-223	ENST00000611614	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.26	□□□□□ -0.61
COPS7B-223	ENST00000611614	UPK2	O00526	184 aa		11.26	□□□□□ -0.61
COPS7B-223	ENST00000611614	TNFRSF13B	O14836	293 aa	Predicted RBP	11.26	□□□□□ -0.61
COPS7B-223	ENST00000611614	LY6H	O94772	140 aa		11.26	□□□□□ -0.61
COPS7B-223	ENST00000611614	ZNF705D	P0CH99	300 aa	Predicted RBP	11.26	□□□□□ -0.61
COPS7B-223	ENST00000611614	ZNF705B	P0CI00	300 aa	Predicted RBP	11.26	□□□□□ -0.61
COPS7B-223	ENST00000611614	ADM	P35318	185 aa		11.26	□□□□□ -0.61
COPS7B-223	ENST00000611614	IL36B	Q9NZH7	164 aa		11.26	□□□□□ -0.61

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