RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 DEFB121Q5J5C9 76 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 ZNF343Q6P1L6 599 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 PLET1Q6UQ28 207 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 ADAMTSL5Q6ZMM2 481 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 REC114Q7Z4M0 266 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 OR1P1Q8NH06 330 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 USMG5Q96IX5 58 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 MARVELD1Q9BSK0 173 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 PDCD10Q9BUL8 212 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 FBXL7Q9UJT9 491 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 S4R3C0 116 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 TENM3Q9P273 2699 aa6.62□□□□□ -1.35
SNCA-212ENST00000611107 A0A0G2JLM5 398 aa6.61□□□□□ -1.35
SNCA-212ENST00000611107 INMT-MINDY4F8WBC2 141 aa6.61□□□□□ -1.35
SNCA-212ENST00000611107 K7EIM0 57 aa6.61□□□□□ -1.35
SNCA-212ENST00000611107 OVOL1O14753 267 aa6.61□□□□□ -1.35
SNCA-212ENST00000611107 IGHV3-23P01764 117 aa6.61□□□□□ -1.35
SNCA-212ENST00000611107 OR8U8P0C7N1 319 aa6.61□□□□□ -1.35
SNCA-212ENST00000611107 DEFA4P12838 97 aa6.61□□□□□ -1.35
SNCA-212ENST00000611107 HIST1H1BP16401 226 aaKnown RBP6.61□□□□□ -1.35
SNCA-212ENST00000611107 DCTN2Q13561 401 aaKnown RBP6.61□□□□□ -1.35
SNCA-212ENST00000611107 C9orf66Q5T8R8 295 aa6.61□□□□□ -1.35
SNCA-212ENST00000611107 PVRIGQ6DKI7 326 aa6.61□□□□□ -1.35
SNCA-212ENST00000611107 ACSM6Q6P461 480 aa6.61□□□□□ -1.35
SNCA-212ENST00000611107 OR1S1Q8NH92 325 aa6.61□□□□□ -1.35
SNCA-212ENST00000611107 TMEM170AQ8WVE7 144 aa6.61□□□□□ -1.35
SNCA-212ENST00000611107 OR10C1Q96KK4 312 aa6.61□□□□□ -1.35
SNCA-212ENST00000611107 RBKSQ9H477 322 aa6.61□□□□□ -1.35
SNCA-212ENST00000611107 SELENOKQ9Y6D0 94 aa6.61□□□□□ -1.35
SNCA-212ENST00000611107 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.6□□□□□ -1.35
SNCA-212ENST00000611107 IGHV3-21A0A0B4J1V1 117 aa6.6□□□□□ -1.35
SNCA-212ENST00000611107 IZUMO1RA6ND01 250 aa6.6□□□□□ -1.35
SNCA-212ENST00000611107 CEBPZOSA8MTT3 80 aa6.6□□□□□ -1.35
SNCA-212ENST00000611107 FAM90A26D6RGX4 464 aa6.6□□□□□ -1.35
SNCA-212ENST00000611107 PPP5D1E7EU14 171 aa6.6□□□□□ -1.35
SNCA-212ENST00000611107 F8W735 103 aaPredicted RBP6.6□□□□□ -1.35
SNCA-212ENST00000611107 BMPR1BO00238 502 aa6.6□□□□□ -1.35
SNCA-212ENST00000611107 HSPB1P04792 205 aaKnown RBP6.6□□□□□ -1.35
SNCA-212ENST00000611107 ATP5G2Q06055 141 aa6.6□□□□□ -1.35
SNCA-212ENST00000611107 C12orf45Q8N5I9 185 aaPredicted RBP6.6□□□□□ -1.35
SNCA-212ENST00000611107 SLC24A4Q8NFF2 622 aa6.6□□□□□ -1.35
SNCA-212ENST00000611107 OR4D5Q8NGN0 318 aa6.6□□□□□ -1.35
SNCA-212ENST00000611107 ZNF502Q8TBZ5 544 aa6.6□□□□□ -1.35
SNCA-212ENST00000611107 DTD1Q8TEA8 209 aa6.6□□□□□ -1.35
SNCA-212ENST00000611107 DPF1Q92782 380 aa6.6□□□□□ -1.35
SNCA-212ENST00000611107 ZNF414Q96IQ9 312 aa6.6□□□□□ -1.35
SNCA-212ENST00000611107 ASCL2Q99929 193 aa6.6□□□□□ -1.35
SNCA-212ENST00000611107 RCL1Q9Y2P8 373 aaKnown RBP6.6□□□□□ -1.35
SNCA-212ENST00000611107 DNAH7Q8WXX0 4024 aa6.6□□□□□ -1.35
SNCA-212ENST00000611107 C7orf66A4D0T2 115 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 SNRPGP15A8MWD9 76 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 I3L2K1 104 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 CYB5BO43169 146 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 PRAF2O60831 178 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 IFNA21P01568 189 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 IAPPP10997 89 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 GPR183P32249 361 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 SYNJ2BPP57105 145 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 ERHP84090 104 aaKnown RBP6.59□□□□□ -1.35
SNCA-212ENST00000611107 KLF5Q13887 457 aaPredicted RBP6.59□□□□□ -1.35
SNCA-212ENST00000611107 IAH1Q2TAA2 248 aaPredicted RBP6.59□□□□□ -1.35
SNCA-212ENST00000611107 C2orf83Q53S99 150 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 SLC25A24Q6NUK1 477 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 ZBTB8BQ8NAP8 495 aaPredicted RBP6.59□□□□□ -1.35
SNCA-212ENST00000611107 OR1L6Q8NGR2 347 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 VN1R17PQ8TDU5 208 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 EEF1AKMT3Q96AZ1 226 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 MISP3Q96FF7 219 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 MCRIP2Q9BUT9 160 aaKnown RBP6.59□□□□□ -1.35
SNCA-212ENST00000611107 MAGT1Q9H0U3 335 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 ENY2Q9NPA8 101 aa6.59□□□□□ -1.35
SNCA-212ENST00000611107 HEYLQ9NQ87 328 aaPredicted RBP6.59□□□□□ -1.35
SNCA-212ENST00000611107 PEF1Q9UBV8 284 aaKnown RBP6.59□□□□□ -1.35
SNCA-212ENST00000611107 TRBV7-1A0A0A6YYK4 115 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 C15orf62A8K5M9 175 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 SYNGR2O43760 224 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 SAP30O75446 220 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 MT-CO2P00403 227 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 IGHV3-48P01763 117 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 CSN3P07498 182 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 NPY1RP25929 384 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 SNCAP37840 140 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 HTR2BP41595 481 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 ID3Q02535 119 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 TATDN3Q17R31 274 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 CLEC19AQ6UXS0 136 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 Q8N1Y9 231 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 UXS1Q8NBZ7 420 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 SCARB1Q8WTV0 552 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 PINX1Q96BK5 328 aaKnown RBP6.58□□□□□ -1.36
SNCA-212ENST00000611107 CXorf58Q96LI9 332 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 B9D2Q9BPU9 175 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 FNDC4Q9H6D8 234 aaPredicted RBP6.58□□□□□ -1.36
SNCA-212ENST00000611107 GPN1Q9HCN4 374 aaPredicted RBP6.58□□□□□ -1.36
SNCA-212ENST00000611107 RANGRFQ9HD47 186 aaPredicted RBP6.58□□□□□ -1.36
SNCA-212ENST00000611107 C21orf62Q9NYP8 219 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 THYN1Q9P016 225 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 MRPL36Q9P0J6 103 aaKnown RBP6.58□□□□□ -1.36
SNCA-212ENST00000611107 CACFD1Q9UGQ2 172 aa6.58□□□□□ -1.36
SNCA-212ENST00000611107 ALG5Q9Y673 324 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms