RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 RASL11BQ9BPW5 248 aa17.12■□□□□ 0.33
USP6NL-204ENST00000606752 NAV3Q8IVL0 2385 aa17.12■□□□□ 0.33
USP6NL-204ENST00000606752 SVEP1Q4LDE5 3571 aa17.12■□□□□ 0.33
USP6NL-204ENST00000606752 FBP1P09467 338 aa17.12■□□□□ 0.33
USP6NL-204ENST00000606752 BPIFB3P59826 476 aa17.12■□□□□ 0.33
USP6NL-204ENST00000606752 COMMD1Q8N668 190 aa17.12■□□□□ 0.33
USP6NL-204ENST00000606752 ARPC1AQ92747 370 aa17.12■□□□□ 0.33
USP6NL-204ENST00000606752 GGTLC1Q9BX51 225 aa17.12■□□□□ 0.33
USP6NL-204ENST00000606752 FNDC4Q9H6D8 234 aaPredicted RBP17.12■□□□□ 0.33
USP6NL-204ENST00000606752 CORTO00230 105 aa17.11■□□□□ 0.33
USP6NL-204ENST00000606752 AGPAT2O15120 278 aa17.11■□□□□ 0.33
USP6NL-204ENST00000606752 HLA-DRB1P01911 266 aa17.11■□□□□ 0.33
USP6NL-204ENST00000606752 MFAP2P55001 183 aa17.11■□□□□ 0.33
USP6NL-204ENST00000606752 SFT2D1Q8WV19 159 aa17.11■□□□□ 0.33
USP6NL-204ENST00000606752 SLC35E1Q96K37 410 aa17.11■□□□□ 0.33
USP6NL-204ENST00000606752 SSX3Q99909 188 aa17.11■□□□□ 0.33
USP6NL-204ENST00000606752 CTRB1P17538 263 aa17.1■□□□□ 0.33
USP6NL-204ENST00000606752 RAB2AP61019 212 aa17.1■□□□□ 0.33
USP6NL-204ENST00000606752 CTRB2Q6GPI1 263 aa17.1■□□□□ 0.33
USP6NL-204ENST00000606752 ETFRF1Q6IPR1 90 aa17.1■□□□□ 0.33
USP6NL-204ENST00000606752 RPP25LQ8N5L8 163 aaKnown RBP17.1■□□□□ 0.33
USP6NL-204ENST00000606752 OR2T6Q8NHC8 308 aa17.1■□□□□ 0.33
USP6NL-204ENST00000606752 FAM103A1Q9BTL3 118 aaKnown RBP17.1■□□□□ 0.33
USP6NL-204ENST00000606752 KCNIP2Q9NS61 270 aa17.1■□□□□ 0.33
USP6NL-204ENST00000606752 SOX21Q9Y651 276 aaPredicted RBP17.1■□□□□ 0.33
USP6NL-204ENST00000606752 IGHV7-81A0A0B4J1V7 117 aa17.1■□□□□ 0.33
USP6NL-204ENST00000606752 ACOT6Q3I5F7 207 aaPredicted RBP17.1■□□□□ 0.33
USP6NL-204ENST00000606752 CYB5R2Q6BCY4 276 aa17.1■□□□□ 0.33
USP6NL-204ENST00000606752 SPSB3Q6PJ21 355 aa17.1■□□□□ 0.33
USP6NL-204ENST00000606752 LFNGQ8NES3 379 aa17.1■□□□□ 0.33
USP6NL-204ENST00000606752 MISP3Q96FF7 219 aa17.1■□□□□ 0.33
USP6NL-204ENST00000606752 RBM14Q96PK6 669 aaKnown RBP17.1■□□□□ 0.33
USP6NL-204ENST00000606752 WNT10AQ9GZT5 417 aa17.1■□□□□ 0.33
USP6NL-204ENST00000606752 PRRC2AP48634 2157 aaKnown RBP17.09■□□□□ 0.33
USP6NL-204ENST00000606752 TRAV1-1A0A0B4J248 108 aa17.09■□□□□ 0.33
USP6NL-204ENST00000606752 BTBD17A6NE02 478 aa17.09■□□□□ 0.33
USP6NL-204ENST00000606752 HBE1P02100 147 aa17.09■□□□□ 0.33
USP6NL-204ENST00000606752 M6PRP20645 277 aa17.09■□□□□ 0.33
USP6NL-204ENST00000606752 NDPQ00604 133 aa17.09■□□□□ 0.33
USP6NL-204ENST00000606752 ZNF726P1Q15940 193 aa17.09■□□□□ 0.33
USP6NL-204ENST00000606752 TOR2AQ5JU69 321 aa17.09■□□□□ 0.33
USP6NL-204ENST00000606752 C19orf35Q6ZS72 473 aa17.09■□□□□ 0.33
USP6NL-204ENST00000606752 WFDC11Q8NEX6 87 aa17.09■□□□□ 0.33
USP6NL-204ENST00000606752 OR10G4Q8NGN3 311 aa17.09■□□□□ 0.33
USP6NL-204ENST00000606752 OR10G9Q8NGN4 311 aa17.09■□□□□ 0.33
USP6NL-204ENST00000606752 OR10G7Q8NGN6 311 aa17.09■□□□□ 0.33
USP6NL-204ENST00000606752 MBD3L1Q8WWY6 194 aa17.09■□□□□ 0.33
USP6NL-204ENST00000606752 RCC1LQ96I51 464 aaKnown RBP17.09■□□□□ 0.33
USP6NL-204ENST00000606752 PXMP4Q9Y6I8 212 aa17.09■□□□□ 0.33
USP6NL-204ENST00000606752 IGKV1OR2-108A0A075B7D4 117 aa17.08■□□□□ 0.33
USP6NL-204ENST00000606752 RPL29P47914 159 aaKnown RBP17.08■□□□□ 0.33
USP6NL-204ENST00000606752 MIC13Q5XKP0 118 aa17.08■□□□□ 0.33
USP6NL-204ENST00000606752 OR1L6Q8NGR2 347 aa17.08■□□□□ 0.33
USP6NL-204ENST00000606752 SLC25A33Q9BSK2 321 aa17.08■□□□□ 0.33
USP6NL-204ENST00000606752 CR1P17927 2039 aa17.08■□□□□ 0.32
USP6NL-204ENST00000606752 NBPF19A0A087WUL8 3843 aa17.08■□□□□ 0.32
USP6NL-204ENST00000606752 ABCA1O95477 2261 aa17.08■□□□□ 0.32
USP6NL-204ENST00000606752 A0A1B0GV50 99 aa17.07■□□□□ 0.32
USP6NL-204ENST00000606752 CRYGCP07315 174 aa17.07■□□□□ 0.32
USP6NL-204ENST00000606752 DEFA4P12838 97 aa17.07■□□□□ 0.32
USP6NL-204ENST00000606752 ACY3Q96HD9 319 aa17.07■□□□□ 0.32
USP6NL-204ENST00000606752 DMRT1Q9Y5R6 373 aa17.07■□□□□ 0.32
USP6NL-204ENST00000606752 TSPAN9O75954 239 aa17.07■□□□□ 0.32
USP6NL-204ENST00000606752 C5orf56Q8N8D9 126 aa17.07■□□□□ 0.32
USP6NL-204ENST00000606752 SLC39A9Q9NUM3 307 aa17.07■□□□□ 0.32
USP6NL-204ENST00000606752 SLC45A2Q9UMX9 530 aa17.07■□□□□ 0.32
USP6NL-204ENST00000606752 MOB4Q9Y3A3 225 aa17.07■□□□□ 0.32
USP6NL-204ENST00000606752 CREBBPQ92793 2442 aa17.07■□□□□ 0.32
USP6NL-204ENST00000606752 NPIPB5A8MRT5 1133 aa17.06■□□□□ 0.32
USP6NL-204ENST00000606752 KRBOX1C9JBD0 128 aa17.06■□□□□ 0.32
USP6NL-204ENST00000606752 CYB5BO43169 146 aa17.06■□□□□ 0.32
USP6NL-204ENST00000606752 EGR2P11161 476 aaPredicted RBP17.06■□□□□ 0.32
USP6NL-204ENST00000606752 B2MP61769 119 aa17.06■□□□□ 0.32
USP6NL-204ENST00000606752 CCL20P78556 96 aa17.06■□□□□ 0.32
USP6NL-204ENST00000606752 SRSF3P84103 164 aaKnown RBP17.06■□□□□ 0.32
USP6NL-204ENST00000606752 ASPHD1Q5U4P2 390 aa17.06■□□□□ 0.32
USP6NL-204ENST00000606752 TMEM219Q86XT9 240 aa17.06■□□□□ 0.32
USP6NL-204ENST00000606752 TTC9CQ8N5M4 171 aa17.06■□□□□ 0.32
USP6NL-204ENST00000606752 BPIFCQ8NFQ6 507 aa17.06■□□□□ 0.32
USP6NL-204ENST00000606752 NPIPB3Q92617 1050 aa17.06■□□□□ 0.32
USP6NL-204ENST00000606752 FAM210AQ96ND0 272 aa17.06■□□□□ 0.32
USP6NL-204ENST00000606752 FOXC2Q99958 501 aa17.06■□□□□ 0.32
USP6NL-204ENST00000606752 ACTR3CQ9C0K3 210 aaPredicted RBP17.06■□□□□ 0.32
USP6NL-204ENST00000606752 CSPG4Q6UVK1 2322 aa17.06■□□□□ 0.32
USP6NL-204ENST00000606752 GCN1Q92616 2671 aaKnown RBP17.06■□□□□ 0.32
USP6NL-204ENST00000606752 YIF1AO95070 293 aa17.05■□□□□ 0.32
USP6NL-204ENST00000606752 PRR20EP86478 221 aa17.05■□□□□ 0.32
USP6NL-204ENST00000606752 PRR20CP86479 221 aa17.05■□□□□ 0.32
USP6NL-204ENST00000606752 PRR20DP86480 221 aa17.05■□□□□ 0.32
USP6NL-204ENST00000606752 PRR20BP86481 221 aa17.05■□□□□ 0.32
USP6NL-204ENST00000606752 PRR20AP86496 221 aa17.05■□□□□ 0.32
USP6NL-204ENST00000606752 LCN15Q6UWW0 184 aa17.05■□□□□ 0.32
USP6NL-204ENST00000606752 SSX7Q7RTT5 188 aa17.05■□□□□ 0.32
USP6NL-204ENST00000606752 STPG3Q8N7X2 389 aa17.05■□□□□ 0.32
USP6NL-204ENST00000606752 NANPQ8TBE9 248 aa17.05■□□□□ 0.32
USP6NL-204ENST00000606752 HSPB9Q9BQS6 159 aa17.05■□□□□ 0.32
USP6NL-204ENST00000606752 H3BUX3 64 aa17.05■□□□□ 0.32
USP6NL-204ENST00000606752 MT-CO2P00403 227 aa17.05■□□□□ 0.32
USP6NL-204ENST00000606752 IGHV3-48P01763 117 aa17.05■□□□□ 0.32
USP6NL-204ENST00000606752 OR10J1P30954 320 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms