RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 MARCH1Q8TCQ1 289 aa15.78■□□□□ 0.12
PPFIA3-209ENST00000602783 RAB2BQ8WUD1 216 aa15.78■□□□□ 0.12
PPFIA3-209ENST00000602783 SPAG8Q99932 426 aaPredicted RBP15.78■□□□□ 0.12
PPFIA3-209ENST00000602783 CCDC59Q9P031 241 aaKnown RBP15.78■□□□□ 0.12
PPFIA3-209ENST00000602783 UBQLN2Q9UHD9 624 aa15.78■□□□□ 0.12
PPFIA3-209ENST00000602783 ZNF207O43670 478 aaKnown RBP15.77■□□□□ 0.12
PPFIA3-209ENST00000602783 SSBP1Q04837 148 aaKnown RBP15.77■□□□□ 0.12
PPFIA3-209ENST00000602783 TRIM16LQ309B1 348 aa15.77■□□□□ 0.12
PPFIA3-209ENST00000602783 SP6Q3SY56 376 aa15.77■□□□□ 0.12
PPFIA3-209ENST00000602783 SMIM4Q8WVI0 70 aa15.77■□□□□ 0.12
PPFIA3-209ENST00000602783 ZNF414Q96IQ9 312 aa15.77■□□□□ 0.12
PPFIA3-209ENST00000602783 TSPAN4O14817 238 aa15.76■□□□□ 0.11
PPFIA3-209ENST00000602783 MT-CO2P00403 227 aa15.76■□□□□ 0.11
PPFIA3-209ENST00000602783 CTSDP07339 412 aaPredicted RBP15.76■□□□□ 0.11
PPFIA3-209ENST00000602783 CTSGP08311 255 aa15.76■□□□□ 0.11
PPFIA3-209ENST00000602783 ERHP84090 104 aaKnown RBP15.76■□□□□ 0.11
PPFIA3-209ENST00000602783 LAMTOR1Q6IAA8 161 aa15.76■□□□□ 0.11
PPFIA3-209ENST00000602783 SLC35G3Q8N808 338 aa15.76■□□□□ 0.11
PPFIA3-209ENST00000602783 DYNC2LI1Q8TCX1 351 aa15.76■□□□□ 0.11
PPFIA3-209ENST00000602783 PINX1Q96BK5 328 aaKnown RBP15.76■□□□□ 0.11
PPFIA3-209ENST00000602783 A0A0B4J293 547 aa15.75■□□□□ 0.11
PPFIA3-209ENST00000602783 NUPL2O15504 423 aaKnown RBP15.75■□□□□ 0.11
PPFIA3-209ENST00000602783 ST8SIA3O43173 380 aa15.75■□□□□ 0.11
PPFIA3-209ENST00000602783 ATG12O94817 140 aa15.75■□□□□ 0.11
PPFIA3-209ENST00000602783 IGHV3-48P01763 117 aa15.75■□□□□ 0.11
PPFIA3-209ENST00000602783 UCP1P25874 307 aa15.75■□□□□ 0.11
PPFIA3-209ENST00000602783 FCGR2BP31994 310 aaPredicted RBP15.75■□□□□ 0.11
PPFIA3-209ENST00000602783 MFAP4P55083 255 aa15.75■□□□□ 0.11
PPFIA3-209ENST00000602783 RELQ04864 619 aaPredicted RBP15.75■□□□□ 0.11
PPFIA3-209ENST00000602783 IL18Q14116 193 aa15.75■□□□□ 0.11
PPFIA3-209ENST00000602783 MEF2DQ14814 521 aa15.75■□□□□ 0.11
PPFIA3-209ENST00000602783 DIRAS2Q96HU8 199 aa15.75■□□□□ 0.11
PPFIA3-209ENST00000602783 BCL7BQ9BQE9 202 aa15.75■□□□□ 0.11
PPFIA3-209ENST00000602783 A0A0G2JRQ6 117 aa15.74■□□□□ 0.11
PPFIA3-209ENST00000602783 C15orf62A8K5M9 175 aa15.74■□□□□ 0.11
PPFIA3-209ENST00000602783 K7EMT4 169 aa15.74■□□□□ 0.11
PPFIA3-209ENST00000602783 APOC4P55056 127 aa15.74■□□□□ 0.11
PPFIA3-209ENST00000602783 TMBIM6P55061 237 aa15.74■□□□□ 0.11
PPFIA3-209ENST00000602783 TXN2Q99757 166 aa15.74■□□□□ 0.11
PPFIA3-209ENST00000602783 C14orf166Q9Y224 244 aaKnown RBP15.74■□□□□ 0.11
PPFIA3-209ENST00000602783 ALMS1Q8TCU4 4167 aa15.73■□□□□ 0.11
PPFIA3-209ENST00000602783 SPRY2O43597 315 aa15.73■□□□□ 0.11
PPFIA3-209ENST00000602783 IFNA17P01571 189 aa15.73■□□□□ 0.11
PPFIA3-209ENST00000602783 Q6ZWC4 215 aa15.73■□□□□ 0.11
PPFIA3-209ENST00000602783 OR4C16Q8NGL9 310 aa15.73■□□□□ 0.11
PPFIA3-209ENST00000602783 RNASE11Q8TAA1 199 aaKnown RBP15.73■□□□□ 0.11
PPFIA3-209ENST00000602783 PDCD10Q9BUL8 212 aa15.73■□□□□ 0.11
PPFIA3-209ENST00000602783 C6orf62Q9GZU0 229 aaPredicted RBP15.73■□□□□ 0.11
PPFIA3-209ENST00000602783 A0A0J9YWU9 116 aa15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 DISC1C4P0D8 188 aa15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 INS-IGF2F8WCM5 200 aa15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 CTDSPLO15194 276 aa15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 GNG7O60262 68 aa15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 NOL3O60936 208 aaKnown RBP15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 B3GALNT1O75752 331 aa15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 OR5AC1P0C628 307 aa15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 AKAIN1P0CW23 69 aa15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 HOXA1P49639 335 aaPredicted RBP15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 PMS2P11Q13670 270 aa15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 ODF3L2Q3SX64 289 aa15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 WFDC3Q8IUB2 231 aa15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 RRNAD1Q96FB5 475 aaKnown RBP15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 RTBDNQ9BSG5 229 aaPredicted RBP15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 NXF2Q9GZY0 626 aaKnown RBP15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 TMEM222Q9H0R3 208 aa15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 TP53TG1Q9Y2A0 90 aa15.72■□□□□ 0.11
PPFIA3-209ENST00000602783 CXorf65A6NEN9 183 aa15.71■□□□□ 0.11
PPFIA3-209ENST00000602783 UBE2CO00762 179 aa15.71■□□□□ 0.11
PPFIA3-209ENST00000602783 YIF1AO95070 293 aa15.71■□□□□ 0.11
PPFIA3-209ENST00000602783 BMI1P35226 326 aa15.71■□□□□ 0.11
PPFIA3-209ENST00000602783 SNCAP37840 140 aa15.71■□□□□ 0.11
PPFIA3-209ENST00000602783 DEFB135Q30KP9 77 aa15.71■□□□□ 0.11
PPFIA3-209ENST00000602783 NAA60Q9H7X0 242 aa15.71■□□□□ 0.11
PPFIA3-209ENST00000602783 RABL2AQ9UBK7 228 aaPredicted RBP15.71■□□□□ 0.11
PPFIA3-209ENST00000602783 SMPXQ9UHP9 88 aa15.71■□□□□ 0.11
PPFIA3-209ENST00000602783 RABL2BQ9UNT1 228 aa15.71■□□□□ 0.11
PPFIA3-209ENST00000602783 IGHV3-49A0A0A0MS15 119 aa15.7■□□□□ 0.1
PPFIA3-209ENST00000602783 IGHV7-4-1A0A0J9YVY3 117 aa15.7■□□□□ 0.1
PPFIA3-209ENST00000602783 TEX13DA0A0J9YY54 714 aaPredicted RBP15.7■□□□□ 0.1
PPFIA3-209ENST00000602783 OR4C46A6NHA9 309 aa15.7■□□□□ 0.1
PPFIA3-209ENST00000602783 H3BMQ9 156 aa15.7■□□□□ 0.1
PPFIA3-209ENST00000602783 RNASE2P10153 161 aaKnown RBP15.7■□□□□ 0.1
PPFIA3-209ENST00000602783 RPL35AP18077 110 aaKnown RBP15.7■□□□□ 0.1
PPFIA3-209ENST00000602783 ETV6P41212 452 aa15.7■□□□□ 0.1
PPFIA3-209ENST00000602783 EWSR1Q01844 656 aaKnown RBP eCLIP15.7■□□□□ 0.1
PPFIA3-209ENST00000602783 TNFRSF9Q07011 255 aa15.7■□□□□ 0.1
PPFIA3-209ENST00000602783 SURF2Q15527 256 aaPredicted RBP15.7■□□□□ 0.1
PPFIA3-209ENST00000602783 LYG2Q86SG7 212 aa15.7■□□□□ 0.1
PPFIA3-209ENST00000602783 STPG3Q8N7X2 389 aa15.7■□□□□ 0.1
PPFIA3-209ENST00000602783 LHFPL5Q8TAF8 219 aa15.7■□□□□ 0.1
PPFIA3-209ENST00000602783 OR10C1Q96KK4 312 aa15.7■□□□□ 0.1
PPFIA3-209ENST00000602783 CDS2O95674 445 aa15.69■□□□□ 0.1
PPFIA3-209ENST00000602783 RPL5P46777 297 aaKnown RBP15.69■□□□□ 0.1
PPFIA3-209ENST00000602783 TMEM116Q8NCL8 245 aa15.69■□□□□ 0.1
PPFIA3-209ENST00000602783 RNF2Q99496 336 aa15.69■□□□□ 0.1
PPFIA3-209ENST00000602783 RHPN1-AS1Q9BWJ2 59 aa15.69■□□□□ 0.1
PPFIA3-209ENST00000602783 SLIRPQ9GZT3 109 aaKnown RBP15.69■□□□□ 0.1
PPFIA3-209ENST00000602783 ENY2Q9NPA8 101 aa15.69■□□□□ 0.1
PPFIA3-209ENST00000602783 KIR2DL5BA0A0G2JN68 375 aa15.68■□□□□ 0.1
PPFIA3-209ENST00000602783 KIR2DL5BA0A0G2JPC4 375 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms