RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ABCA11PQ4W5N1 156 aa7.29□□□□□ -1.24
COMMD3-215ENST00000602574 TMEM196Q5HYL7 178 aa7.29□□□□□ -1.24
COMMD3-215ENST00000602574 TMEM86BQ8N661 226 aa7.29□□□□□ -1.24
COMMD3-215ENST00000602574 KLF16Q9BXK1 252 aaPredicted RBP7.29□□□□□ -1.24
COMMD3-215ENST00000602574 TMEM59Q9BXS4 323 aa7.29□□□□□ -1.24
COMMD3-215ENST00000602574 PBOV1Q9GZY1 135 aa7.29□□□□□ -1.24
COMMD3-215ENST00000602574 KIAA1549LQ6ZVL6 1849 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 LOC102723996A0A087X1L8 192 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 IZUMO1RA6ND01 250 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 METTL12A8MUP2 240 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 IGHG1P01857 330 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 CECR9P0C854 216 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 NPPBP16860 134 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 MALLQ13021 153 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 RRN3P1Q2M238 152 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 Q5XG85 94 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 LYSMD4Q5XG99 296 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 SUMF1Q8NBK3 374 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 C11orf52Q96A22 123 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 MLST8Q9BVC4 326 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 C1QTNF5Q9BXJ0 243 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 SPRY4Q9C004 299 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 GTF3C1Q12789 2109 aa7.28□□□□□ -1.24
COMMD3-215ENST00000602574 TRAV4A0A0B4J268 109 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 A0A0B4J2E0 115 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 CCL15-CCL14A0A0B4J2E2 113 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 A0A0U1RRA0 63 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 A0A1B0GX12 115 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 SMIM27A0A1W2PRY6 76 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 ATP5LO75964 103 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 NKX2-2O95096 273 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 C1orf105O95561 183 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 PPYP01298 95 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 HLA-DRB4P13762 266 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 HLA-DOBP13765 273 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 SMCPP49901 116 aaPredicted RBP7.27□□□□□ -1.24
COMMD3-215ENST00000602574 MZT1Q08AG7 82 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 EIF3IQ13347 325 aaKnown RBP7.27□□□□□ -1.24
COMMD3-215ENST00000602574 C1orf61Q13536 156 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 GUSBP1Q15486 140 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 C9orf153Q5TBE3 101 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 TXNDC8Q6A555 127 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 PQLC2Q6ZP29 291 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 OR13H1Q8NG92 308 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 SCNM1Q9BWG6 230 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 ULBP3Q9BZM4 244 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 FAM60AQ9NP50 221 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 METRNQ9UJH8 293 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 HLA-DRB4X5D2U9 266 aa7.27□□□□□ -1.24
COMMD3-215ENST00000602574 TRBV20OR9-2A0A075B6H5 130 aa7.27□□□□□ -1.25
COMMD3-215ENST00000602574 A0A1W2PRX2 142 aa7.27□□□□□ -1.25
COMMD3-215ENST00000602574 FAM90A5PA8MXJ8 464 aa7.27□□□□□ -1.25
COMMD3-215ENST00000602574 C2CD4DB7Z1M9 353 aa7.27□□□□□ -1.25
COMMD3-215ENST00000602574 NDUFS7O75251 213 aa7.27□□□□□ -1.25
COMMD3-215ENST00000602574 NDUFB4O95168 129 aa7.27□□□□□ -1.25
COMMD3-215ENST00000602574 KLRB1Q12918 225 aa7.27□□□□□ -1.25
COMMD3-215ENST00000602574 LYRM7Q5U5X0 104 aa7.27□□□□□ -1.25
COMMD3-215ENST00000602574 MORN3Q6PF18 240 aaPredicted RBP7.27□□□□□ -1.25
COMMD3-215ENST00000602574 HSD11B1LQ7Z5J1 315 aa7.27□□□□□ -1.25
COMMD3-215ENST00000602574 MOB3BQ86TA1 216 aa7.27□□□□□ -1.25
COMMD3-215ENST00000602574 TRPT1Q86TN4 253 aaKnown RBP7.27□□□□□ -1.25
COMMD3-215ENST00000602574 GATD1Q8NB37 220 aa7.27□□□□□ -1.25
COMMD3-215ENST00000602574 DLX4Q92988 240 aaPredicted RBP7.27□□□□□ -1.25
COMMD3-215ENST00000602574 KIAA1549Q9HCM3 1950 aa7.27□□□□□ -1.25
COMMD3-215ENST00000602574 DOCK3Q8IZD9 2030 aa7.27□□□□□ -1.25
COMMD3-215ENST00000602574 A0A0A6YYD4 124 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 A0A1B0GTH9 108 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 A0A1B0GVT2 93 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 ARFRP1Q13795 201 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 SLC48A1Q6P1K1 146 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.26□□□□□ -1.25
COMMD3-215ENST00000602574 TAF15Q92804 592 aaKnown RBP eCLIP7.26□□□□□ -1.25
COMMD3-215ENST00000602574 LINC00477Q96M19 166 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 C1orf43Q9BWL3 253 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 OR10A2Q9H208 303 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 ZNF331Q9NQX6 463 aaPredicted RBP7.26□□□□□ -1.25
COMMD3-215ENST00000602574 FZR1Q9UM11 496 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 EML5Q05BV3 1969 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 PLPP1O14494 284 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 IGHMP01871 453 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 DSCR4P56555 118 aaPredicted RBP7.26□□□□□ -1.25
COMMD3-215ENST00000602574 TIRAPP58753 221 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 MYOZ3Q8TDC0 251 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 URB1-AS1Q96HZ7 61 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 C20orf173Q96LM9 149 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 GLIPR2Q9H4G4 154 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 TMEM74BQ9NUR3 256 aa7.26□□□□□ -1.25
COMMD3-215ENST00000602574 FOXA2Q9Y261 457 aaPredicted RBP7.26□□□□□ -1.25
COMMD3-215ENST00000602574 CHCHD2Q9Y6H1 151 aaPredicted RBP7.26□□□□□ -1.25
COMMD3-215ENST00000602574 TRBV7-7A0A0K0K1E9 115 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 SHISA9B4DS77 424 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 IGKV1D-33P01593 117 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 IGKV1-33P01594 117 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 FXYD2P54710 66 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 TMEM50BP56557 158 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 HERV-K104P61576 105 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 ZNF718Q3SXZ3 478 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 C10orf126Q8N4M7 172 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 STPG3Q8N7X2 389 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 SAP25Q8TEE9 199 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms