RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 ACTL10Q5JWF8 245 aa11.41□□□□□ -0.58
SSBP4-211ENST00000601614 AADACL3Q5VUY0 350 aa11.41□□□□□ -0.58
SSBP4-211ENST00000601614 TXN2Q99757 166 aa11.41□□□□□ -0.58
SSBP4-211ENST00000601614 GINS3Q9BRX5 216 aa11.41□□□□□ -0.58
SSBP4-211ENST00000601614 DMBT1Q9UGM3 2413 aaPredicted RBP11.4□□□□□ -0.58
SSBP4-211ENST00000601614 PDCD5O14737 125 aa11.4□□□□□ -0.58
SSBP4-211ENST00000601614 STXBP6Q8NFX7 210 aa11.4□□□□□ -0.58
SSBP4-211ENST00000601614 DCANP1Q8TF63 244 aa11.4□□□□□ -0.58
SSBP4-211ENST00000601614 GRAMD2BQ96HH9 432 aa11.4□□□□□ -0.58
SSBP4-211ENST00000601614 MGLLQ99685 303 aa11.4□□□□□ -0.58
SSBP4-211ENST00000601614 ACOT13Q9NPJ3 140 aa11.4□□□□□ -0.58
SSBP4-211ENST00000601614 C8orf4Q9NR00 106 aa11.4□□□□□ -0.58
SSBP4-211ENST00000601614 PUS1Q9Y606 427 aaKnown RBP eCLIP11.4□□□□□ -0.58
SSBP4-211ENST00000601614 A0A1B0GU03 582 aa11.39□□□□□ -0.59
SSBP4-211ENST00000601614 GNG7O60262 68 aa11.39□□□□□ -0.59
SSBP4-211ENST00000601614 KRASP01116 189 aa11.39□□□□□ -0.59
SSBP4-211ENST00000601614 FCER2P06734 321 aa11.39□□□□□ -0.59
SSBP4-211ENST00000601614 RAB3BP20337 219 aa11.39□□□□□ -0.59
SSBP4-211ENST00000601614 NPY1RP25929 384 aa11.39□□□□□ -0.59
SSBP4-211ENST00000601614 G6PCP35575 357 aa11.39□□□□□ -0.59
SSBP4-211ENST00000601614 ERVK-16P61578 105 aa11.39□□□□□ -0.59
SSBP4-211ENST00000601614 TMEM17Q86X19 198 aa11.39□□□□□ -0.59
SSBP4-211ENST00000601614 BEST4Q8NFU0 473 aa11.39□□□□□ -0.59
SSBP4-211ENST00000601614 FCAMRQ8WWV6 532 aa11.39□□□□□ -0.59
SSBP4-211ENST00000601614 ARPC4P59998 168 aa11.38□□□□□ -0.59
SSBP4-211ENST00000601614 RCN1Q15293 331 aa11.38□□□□□ -0.59
SSBP4-211ENST00000601614 RNF212Q495C1 297 aa11.38□□□□□ -0.59
SSBP4-211ENST00000601614 PINX1Q96BK5 328 aaKnown RBP11.38□□□□□ -0.59
SSBP4-211ENST00000601614 TMEM56Q96MV1 263 aa11.38□□□□□ -0.59
SSBP4-211ENST00000601614 DUSP21Q9H596 190 aa11.38□□□□□ -0.59
SSBP4-211ENST00000601614 XCL2Q9UBD3 114 aa11.38□□□□□ -0.59
SSBP4-211ENST00000601614 GNRHRP30968 328 aa11.37□□□□□ -0.59
SSBP4-211ENST00000601614 LPAR6P43657 344 aa11.37□□□□□ -0.59
SSBP4-211ENST00000601614 SCN3BQ9NY72 215 aa11.37□□□□□ -0.59
SSBP4-211ENST00000601614 SNAPC5O75971 98 aa11.36□□□□□ -0.59
SSBP4-211ENST00000601614 RLN1P04808 185 aa11.36□□□□□ -0.59
SSBP4-211ENST00000601614 MYL9P24844 172 aa11.36□□□□□ -0.59
SSBP4-211ENST00000601614 F2RP25116 425 aa11.36□□□□□ -0.59
SSBP4-211ENST00000601614 EMP1P54849 157 aa11.36□□□□□ -0.59
SSBP4-211ENST00000601614 ZNF600Q6ZNG1 722 aa11.36□□□□□ -0.59
SSBP4-211ENST00000601614 CADM3Q8N126 398 aa11.36□□□□□ -0.59
SSBP4-211ENST00000601614 ZNF114Q8NC26 417 aa11.36□□□□□ -0.59
SSBP4-211ENST00000601614 FAM210BQ96KR6 192 aa11.36□□□□□ -0.59
SSBP4-211ENST00000601614 RAB40CQ96S21 281 aa11.36□□□□□ -0.59
SSBP4-211ENST00000601614 PRNDQ9UKY0 176 aa11.36□□□□□ -0.59
SSBP4-211ENST00000601614 CASQ2O14958 399 aaPredicted RBP11.35□□□□□ -0.59
SSBP4-211ENST00000601614 PGLYRP1O75594 196 aaPredicted RBP11.35□□□□□ -0.59
SSBP4-211ENST00000601614 SPART-AS1P0CW21 52 aa11.35□□□□□ -0.59
SSBP4-211ENST00000601614 P2RY1P47900 373 aa11.35□□□□□ -0.59
SSBP4-211ENST00000601614 PPP5CP53041 499 aa11.35□□□□□ -0.59
SSBP4-211ENST00000601614 OGFRL1Q5TC84 451 aaPredicted RBP11.35□□□□□ -0.59
SSBP4-211ENST00000601614 ZNF367Q7RTV3 350 aa11.35□□□□□ -0.59
SSBP4-211ENST00000601614 HOGA1Q86XE5 327 aa11.35□□□□□ -0.59
SSBP4-211ENST00000601614 RGS10O43665 173 aa11.34□□□□□ -0.59
SSBP4-211ENST00000601614 PSMG4Q5JS54 123 aa11.34□□□□□ -0.59
SSBP4-211ENST00000601614 C22orf42Q6IC83 251 aa11.34□□□□□ -0.59
SSBP4-211ENST00000601614 ZNF705AQ6ZN79 300 aaPredicted RBP11.34□□□□□ -0.59
SSBP4-211ENST00000601614 LGALS14Q8TCE9 139 aa11.34□□□□□ -0.59
SSBP4-211ENST00000601614 MOB3AQ96BX8 217 aa11.34□□□□□ -0.59
SSBP4-211ENST00000601614 CCDC90BQ9GZT6 254 aa11.34□□□□□ -0.59
SSBP4-211ENST00000601614 TMEM231Q9H6L2 316 aa11.34□□□□□ -0.59
SSBP4-211ENST00000601614 MRPL36Q9P0J6 103 aaKnown RBP11.34□□□□□ -0.59
SSBP4-211ENST00000601614 DKK2Q9UBU2 259 aa11.34□□□□□ -0.59
SSBP4-211ENST00000601614 ZNF705FA8MVS1 300 aaPredicted RBP11.33□□□□□ -0.6
SSBP4-211ENST00000601614 TMEM50AO95807 157 aa11.33□□□□□ -0.6
SSBP4-211ENST00000601614 ZNF705DP0CH99 300 aaPredicted RBP11.33□□□□□ -0.6
SSBP4-211ENST00000601614 ZNF705BP0CI00 300 aaPredicted RBP11.33□□□□□ -0.6
SSBP4-211ENST00000601614 HTN3P15516 51 aa11.33□□□□□ -0.6
SSBP4-211ENST00000601614 NPPCP23582 126 aa11.33□□□□□ -0.6
SSBP4-211ENST00000601614 CRYBB3P26998 211 aa11.33□□□□□ -0.6
SSBP4-211ENST00000601614 NEU1Q99519 415 aa11.33□□□□□ -0.6
SSBP4-211ENST00000601614 FKBP11Q9NYL4 201 aa11.33□□□□□ -0.6
SSBP4-211ENST00000601614 TPRKBQ9Y3C4 175 aa11.33□□□□□ -0.6
SSBP4-211ENST00000601614 TRDV1A0A1B0GX56 115 aa11.32□□□□□ -0.6
SSBP4-211ENST00000601614 A0A1W2PS18 150 aa11.32□□□□□ -0.6
SSBP4-211ENST00000601614 PRCDQ00LT1 54 aa11.32□□□□□ -0.6
SSBP4-211ENST00000601614 FAM222AQ5U5X8 452 aa11.32□□□□□ -0.6
SSBP4-211ENST00000601614 TMEM88Q6PEY1 159 aa11.32□□□□□ -0.6
SSBP4-211ENST00000601614 TPRA1Q86W33 373 aa11.32□□□□□ -0.6
SSBP4-211ENST00000601614 C6orf223Q8N319 242 aa11.32□□□□□ -0.6
SSBP4-211ENST00000601614 NIPSNAP3BQ9BS92 247 aa11.32□□□□□ -0.6
SSBP4-211ENST00000601614 C1QTNF4Q9BXJ3 329 aa11.32□□□□□ -0.6
SSBP4-211ENST00000601614 NDUFB11Q9NX14 153 aa11.32□□□□□ -0.6
SSBP4-211ENST00000601614 TRAV18A0A075B6X5 111 aa11.31□□□□□ -0.6
SSBP4-211ENST00000601614 HELTA6NFD8 242 aa11.31□□□□□ -0.6
SSBP4-211ENST00000601614 NOTOA8MTQ0 251 aa11.31□□□□□ -0.6
SSBP4-211ENST00000601614 H3BMM0 161 aa11.31□□□□□ -0.6
SSBP4-211ENST00000601614 SCGNO76038 276 aa11.31□□□□□ -0.6
SSBP4-211ENST00000601614 FGF9P31371 208 aaPredicted RBP11.31□□□□□ -0.6
SSBP4-211ENST00000601614 NPBWR1P48145 328 aa11.31□□□□□ -0.6
SSBP4-211ENST00000601614 DHRS2Q13268 280 aa11.31□□□□□ -0.6
SSBP4-211ENST00000601614 SPINK9Q5DT21 86 aa11.31□□□□□ -0.6
SSBP4-211ENST00000601614 PRSS48Q7RTY5 328 aa11.31□□□□□ -0.6
SSBP4-211ENST00000601614 SPATA12Q7Z6I5 190 aa11.31□□□□□ -0.6
SSBP4-211ENST00000601614 OR5AP2Q8NGF4 316 aa11.31□□□□□ -0.6
SSBP4-211ENST00000601614 SLC25A38Q96DW6 304 aa11.31□□□□□ -0.6
SSBP4-211ENST00000601614 METTL26Q96S19 204 aa11.31□□□□□ -0.6
SSBP4-211ENST00000601614 YTHDF1Q9BYJ9 559 aaKnown RBP11.31□□□□□ -0.6
SSBP4-211ENST00000601614 RHBDL2Q9NX52 303 aa11.31□□□□□ -0.6
SSBP4-211ENST00000601614 DAPK2Q9UIK4 370 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms