RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 SNCAP37840 140 aa15.31■□□□□ 0.04
SSBP4-210ENST00000601444 UBE2MP61081 183 aaKnown RBP15.31■□□□□ 0.04
SSBP4-210ENST00000601444 DHRS2Q13268 280 aa15.31■□□□□ 0.04
SSBP4-210ENST00000601444 SMCO1Q147U7 214 aa15.31■□□□□ 0.04
SSBP4-210ENST00000601444 PDLIM3Q53GG5 364 aaPredicted RBP15.31■□□□□ 0.04
SSBP4-210ENST00000601444 C20orf85Q9H1P6 137 aa15.31■□□□□ 0.04
SSBP4-210ENST00000601444 ENY2Q9NPA8 101 aa15.31■□□□□ 0.04
SSBP4-210ENST00000601444 TRAV6A0A075B6T7 132 aa15.3■□□□□ 0.04
SSBP4-210ENST00000601444 WI2-2373I1.2A0A1W2PRP0 233 aa15.3■□□□□ 0.04
SSBP4-210ENST00000601444 OR2T8A6NH00 312 aa15.3■□□□□ 0.04
SSBP4-210ENST00000601444 UPK1BO75841 260 aa15.3■□□□□ 0.04
SSBP4-210ENST00000601444 TCRBP04435 133 aa15.3■□□□□ 0.04
SSBP4-210ENST00000601444 HOXB5P09067 269 aa15.3■□□□□ 0.04
SSBP4-210ENST00000601444 INSL3P51460 131 aa15.3■□□□□ 0.04
SSBP4-210ENST00000601444 FAM209BQ5JX69 171 aa15.3■□□□□ 0.04
SSBP4-210ENST00000601444 PINX1Q96BK5 328 aaKnown RBP15.3■□□□□ 0.04
SSBP4-210ENST00000601444 OR4C12Q96R67 309 aa15.3■□□□□ 0.04
SSBP4-210ENST00000601444 C21orf62Q9NYP8 219 aa15.3■□□□□ 0.04
SSBP4-210ENST00000601444 IGHV3-35A0A0C4DH35 117 aa15.29■□□□□ 0.04
SSBP4-210ENST00000601444 A0A1B0GU03 582 aa15.29■□□□□ 0.04
SSBP4-210ENST00000601444 DUXBA0A1W2PPF3 345 aa15.29■□□□□ 0.04
SSBP4-210ENST00000601444 CEBPZOSA8MTT3 80 aa15.29■□□□□ 0.04
SSBP4-210ENST00000601444 MT-CO2P00403 227 aa15.29■□□□□ 0.04
SSBP4-210ENST00000601444 CSN3P07498 182 aa15.29■□□□□ 0.04
SSBP4-210ENST00000601444 EDN2P20800 178 aa15.29■□□□□ 0.04
SSBP4-210ENST00000601444 TATDN3Q17R31 274 aa15.29■□□□□ 0.04
SSBP4-210ENST00000601444 C4orf46Q504U0 113 aa15.29■□□□□ 0.04
SSBP4-210ENST00000601444 PVRIGQ6DKI7 326 aa15.29■□□□□ 0.04
SSBP4-210ENST00000601444 LYG2Q86SG7 212 aa15.29■□□□□ 0.04
SSBP4-210ENST00000601444 UBAC2Q8NBM4 344 aa15.29■□□□□ 0.04
SSBP4-210ENST00000601444 OR52B4Q8NGK2 314 aa15.29■□□□□ 0.04
SSBP4-210ENST00000601444 ELOVL1Q9BW60 279 aa15.29■□□□□ 0.04
SSBP4-210ENST00000601444 HEYLQ9NQ87 328 aaPredicted RBP15.29■□□□□ 0.04
SSBP4-210ENST00000601444 K7EIL1 84 aa15.28■□□□□ 0.04
SSBP4-210ENST00000601444 PITX3O75364 302 aa15.28■□□□□ 0.04
SSBP4-210ENST00000601444 ADAP1O75689 374 aa15.28■□□□□ 0.04
SSBP4-210ENST00000601444 TNFRSF9Q07011 255 aa15.28■□□□□ 0.04
SSBP4-210ENST00000601444 ASAH1Q13510 395 aa15.28■□□□□ 0.04
SSBP4-210ENST00000601444 MLANAQ16655 118 aa15.28■□□□□ 0.04
SSBP4-210ENST00000601444 BSXQ3C1V8 233 aa15.28■□□□□ 0.04
SSBP4-210ENST00000601444 GGNBP1Q5YKI7 109 aa15.28■□□□□ 0.04
SSBP4-210ENST00000601444 PLET1Q6UQ28 207 aa15.28■□□□□ 0.04
SSBP4-210ENST00000601444 ADAMTSL5Q6ZMM2 481 aa15.28■□□□□ 0.04
SSBP4-210ENST00000601444 GPHB5Q86YW7 130 aa15.28■□□□□ 0.04
SSBP4-210ENST00000601444 OR1S1Q8NH92 325 aa15.28■□□□□ 0.04
SSBP4-210ENST00000601444 CHRDL1Q9BU40 450 aa15.28■□□□□ 0.04
SSBP4-210ENST00000601444 RBKSQ9H477 322 aa15.28■□□□□ 0.04
SSBP4-210ENST00000601444 NUDT15Q9NV35 164 aa15.28■□□□□ 0.04
SSBP4-210ENST00000601444 HSPB7Q9UBY9 170 aa15.28■□□□□ 0.04
SSBP4-210ENST00000601444 MPTX1A8MV57 137 aa15.27■□□□□ 0.04
SSBP4-210ENST00000601444 TGOLN2O43493 480 aa15.27■□□□□ 0.04
SSBP4-210ENST00000601444 Q56UQ5 140 aa15.27■□□□□ 0.04
SSBP4-210ENST00000601444 REC114Q7Z4M0 266 aa15.27■□□□□ 0.04
SSBP4-210ENST00000601444 PRR25Q96S07 402 aa15.27■□□□□ 0.04
SSBP4-210ENST00000601444 TMED3Q9Y3Q3 217 aa15.27■□□□□ 0.04
SSBP4-210ENST00000601444 FAM240BA0A1B0GVZ2 78 aa15.26■□□□□ 0.03
SSBP4-210ENST00000601444 ADMP35318 185 aa15.26■□□□□ 0.03
SSBP4-210ENST00000601444 SUB1P53999 127 aaKnown RBP eCLIP15.26■□□□□ 0.031e-6■□□□□ 8.5
SSBP4-210ENST00000601444 UNQ9165/PRO28630Q6UXU0 137 aa15.26■□□□□ 0.03
SSBP4-210ENST00000601444 MRAPQ8TCY5 172 aa15.26■□□□□ 0.03
SSBP4-210ENST00000601444 TMEM170AQ8WVE7 144 aa15.26■□□□□ 0.03
SSBP4-210ENST00000601444 PRKDCP78527 4128 aaKnown RBP15.26■□□□□ 0.03
SSBP4-210ENST00000601444 PIGBOS1A0A0B4J2F0 54 aa15.25■□□□□ 0.03
SSBP4-210ENST00000601444 ZNF320A2RRD8 509 aa15.25■□□□□ 0.03
SSBP4-210ENST00000601444 LGALS9O00182 355 aa15.25■□□□□ 0.03
SSBP4-210ENST00000601444 IGLV1-51P01701 117 aa15.25■□□□□ 0.03
SSBP4-210ENST00000601444 SPNP16150 400 aa15.25■□□□□ 0.03
SSBP4-210ENST00000601444 MZT2BQ6NZ67 158 aa15.25■□□□□ 0.03
SSBP4-210ENST00000601444 COQ8AQ8NI60 647 aa15.25■□□□□ 0.03
SSBP4-210ENST00000601444 BSCL2Q96G97 398 aaPredicted RBP15.25■□□□□ 0.03
SSBP4-210ENST00000601444 ZNF414Q96IQ9 312 aa15.25■□□□□ 0.03
SSBP4-210ENST00000601444 FNDC4Q9H6D8 234 aaPredicted RBP15.25■□□□□ 0.03
SSBP4-210ENST00000601444 PEMTQ9UBM1 199 aa15.25■□□□□ 0.03
SSBP4-210ENST00000601444 CTSGP08311 255 aa15.24■□□□□ 0.03
SSBP4-210ENST00000601444 H2AFB2P0C5Z0 115 aa15.24■□□□□ 0.03
SSBP4-210ENST00000601444 SLC25A6P12236 298 aa15.24■□□□□ 0.03
SSBP4-210ENST00000601444 HTR2BP41595 481 aa15.24■□□□□ 0.03
SSBP4-210ENST00000601444 MFAP4P55083 255 aa15.24■□□□□ 0.03
SSBP4-210ENST00000601444 FAM106AQ4KMX7 169 aa15.24■□□□□ 0.03
SSBP4-210ENST00000601444 SLC24A4Q8NFF2 622 aa15.24■□□□□ 0.03
SSBP4-210ENST00000601444 DTD1Q8TEA8 209 aa15.24■□□□□ 0.03
SSBP4-210ENST00000601444 CACNG8Q8WXS5 425 aa15.24■□□□□ 0.03
SSBP4-210ENST00000601444 SEC22CQ9BRL7 303 aa15.24■□□□□ 0.03
SSBP4-210ENST00000601444 HIPK2Q9H2X6 1198 aa15.24■□□□□ 0.03
SSBP4-210ENST00000601444 MRPL36Q9P0J6 103 aaKnown RBP15.24■□□□□ 0.03
SSBP4-210ENST00000601444 ZNF256Q9Y2P7 627 aaPredicted RBP15.24■□□□□ 0.03
SSBP4-210ENST00000601444 SELENOKQ9Y6D0 94 aa15.24■□□□□ 0.03
SSBP4-210ENST00000601444 C2orf70A6NJV1 201 aa15.23■□□□□ 0.03
SSBP4-210ENST00000601444 TM4SF20Q53R12 229 aa15.23■□□□□ 0.03
SSBP4-210ENST00000601444 C2orf83Q53S99 150 aa15.23■□□□□ 0.03
SSBP4-210ENST00000601444 MITD1Q8WV92 249 aa15.23■□□□□ 0.03
SSBP4-210ENST00000601444 ATP6V0BQ99437 205 aa15.23■□□□□ 0.03
SSBP4-210ENST00000601444 ZNF436Q9C0F3 470 aaPredicted RBP15.23■□□□□ 0.03
SSBP4-210ENST00000601444 ZMAT5Q9UDW3 170 aaKnown RBP15.23■□□□□ 0.03
SSBP4-210ENST00000601444 CACFD1Q9UGQ2 172 aa15.23■□□□□ 0.03
SSBP4-210ENST00000601444 IGHV3OR16-8A0A075B7F1 116 aa15.22■□□□□ 0.03
SSBP4-210ENST00000601444 TMEM213A2RRL7 107 aa15.22■□□□□ 0.03
SSBP4-210ENST00000601444 LY86O95711 162 aa15.22■□□□□ 0.03
SSBP4-210ENST00000601444 FOLR2P14207 255 aa15.22■□□□□ 0.03
SSBP4-210ENST00000601444 FCGR2BP31994 310 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms