RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 RBBP9O75884 186 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 HBZP02008 142 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 IGKV1-16P04430 117 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 SCTP09683 121 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 DBTP11182 482 aaKnown RBP2.9□□□□□ -1.95
VRK3-222ENST00000601324 CD40LGP29965 261 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 MAGEA2P43356 314 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 KRTAP10-1P60331 282 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 RHOGP84095 191 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 ZNF322Q6U7Q0 402 aaPredicted RBP2.9□□□□□ -1.95
VRK3-222ENST00000601324 TMEM17Q86X19 198 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 FAM223AQ8IWN6 122 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 CEND1Q8N111 149 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 C14orf178Q8N769 122 aaPredicted RBP2.9□□□□□ -1.95
VRK3-222ENST00000601324 OR1L6Q8NGR2 347 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 OR4A5Q8NH83 315 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 GRPEL2Q8TAA5 225 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 CD300LFQ8TDQ1 290 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 FRZBQ92765 325 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 PHYHIPLQ96FC7 376 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 PYURFQ96I23 114 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 CLCC1Q96S66 551 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 PPDPFQ9H3Y8 114 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 SAR1AQ9NR31 198 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 SLC2A9Q9NRM0 540 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 OR1A1Q9P1Q5 309 aa2.9□□□□□ -1.95
VRK3-222ENST00000601324 METTL1Q9UBP6 276 aaKnown RBP2.9□□□□□ -1.95
VRK3-222ENST00000601324 OR5H14A6NHG9 310 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 YPEL1O60688 119 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 GGCTO75223 188 aaKnown RBP2.89□□□□□ -1.95
VRK3-222ENST00000601324 GPX5O75715 221 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 SC5DO75845 299 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 SERPINA3P01011 423 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 IFNA10P01566 189 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 PRH1P02810 166 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 SMR3BP02814 79 aaPredicted RBP2.89□□□□□ -1.95
VRK3-222ENST00000601324 ISG15P05161 165 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 MRPL3P09001 348 aaKnown RBP2.89□□□□□ -1.95
VRK3-222ENST00000601324 RCC1P18754 421 aaPredicted RBP2.89□□□□□ -1.95
VRK3-222ENST00000601324 PPP1CCP36873 323 aaKnown RBP2.89□□□□□ -1.95
VRK3-222ENST00000601324 KRTAP10-4P60372 401 aaPredicted RBP2.89□□□□□ -1.95
VRK3-222ENST00000601324 CXCR4P61073 352 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 RPL39P5Q59GN2 51 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 ZNF691Q5VV52 312 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 GLYATQ6IB77 296 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 MORN3Q6PF18 240 aaPredicted RBP2.89□□□□□ -1.95
VRK3-222ENST00000601324 Q6ZRN7 208 aaPredicted RBP2.89□□□□□ -1.95
VRK3-222ENST00000601324 ZNF767PQ75MW2 155 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 ARPINQ7Z6K5 226 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 APRG1Q8IVJ8 170 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 LINC01561Q8N1V8 128 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 OR51A4Q8NGJ6 313 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 OR5B3Q8NH48 314 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 MARC2Q969Z3 335 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 FGGYQ96C11 551 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 FAM210BQ96KR6 192 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 YPEL2Q96QA6 119 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 ZNF355PQ9NSJ1 428 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 GID8Q9NWU2 228 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 IL36GQ9NZH8 169 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 GNG12Q9UBI6 72 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 JPT1Q9UK76 154 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 IKZF2Q9UKS7 526 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 TMEM14AQ9Y6G1 99 aa2.89□□□□□ -1.95
VRK3-222ENST00000601324 LOC100131303A0A0U1RQF7 123 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 A0A1B0GW64 132 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 TNFRSF11BO00300 401 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 GABRPO00591 440 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 GEMIN2O14893 280 aaKnown RBP2.88□□□□□ -1.95
VRK3-222ENST00000601324 CCNB2O95067 398 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 FABP3P05413 133 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 MIFP14174 115 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 SERPINA2P20848 420 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 GALP22466 123 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 PSMB6P28072 239 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 FUSP35637 526 aaKnown RBP eCLIP2.88□□□□□ -1.95
VRK3-222ENST00000601324 RBM11P57052 281 aaKnown RBP2.88□□□□□ -1.95
VRK3-222ENST00000601324 MAGOHP61326 146 aaKnown RBP2.88□□□□□ -1.95
VRK3-222ENST00000601324 ATP5G2Q06055 141 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 RIPK1Q13546 671 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 LAGE3Q14657 143 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 GINS1Q14691 196 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 KISS1Q15726 138 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 ZSCAN26Q16670 478 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 SYT6Q5T7P8 510 aaPredicted RBP2.88□□□□□ -1.95
VRK3-222ENST00000601324 AADACL4Q5VUY2 407 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 SLC38A6Q8IZM9 456 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 TTC9CQ8N5M4 171 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 NECAP1Q8NC96 275 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 OR10H4Q8NGA5 316 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 OR13C9Q8NGT0 318 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 OR10K1Q8NGX5 313 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 C16orf74Q96GX8 76 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 ZNF184Q99676 751 aaPredicted RBP2.88□□□□□ -1.95
VRK3-222ENST00000601324 HOPXQ9BPY8 73 aaPredicted RBP2.88□□□□□ -1.95
VRK3-222ENST00000601324 KCTD14Q9BQ13 255 aaPredicted RBP2.88□□□□□ -1.95
VRK3-222ENST00000601324 ZNF436Q9C0F3 470 aaPredicted RBP2.88□□□□□ -1.95
VRK3-222ENST00000601324 PAK1IP1Q9NWT1 392 aaPredicted RBP2.88□□□□□ -1.95
VRK3-222ENST00000601324 CLN6Q9NWW5 311 aa2.88□□□□□ -1.95
VRK3-222ENST00000601324 ANAPC11Q9NYG5 84 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms