RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	MARC2	Q969Z3	335 aa		11.66	□□□□□ -0.54
PLD3-223	ENST00000600948	TMEM230	Q96A57	120 aa		11.66	□□□□□ -0.54
PLD3-223	ENST00000600948	WDR89	Q96FK6	387 aa	Predicted RBP	11.66	□□□□□ -0.54
PLD3-223	ENST00000600948	ZNF414	Q96IQ9	312 aa		11.66	□□□□□ -0.54
PLD3-223	ENST00000600948	MCUB	Q9NWR8	336 aa		11.66	□□□□□ -0.54
PLD3-223	ENST00000600948	UFC1	Q9Y3C8	167 aa		11.66	□□□□□ -0.54
PLD3-223	ENST00000600948	NDUFA4	O00483	81 aa		11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	IFNA17	P01571	189 aa		11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	CTSG	P08311	255 aa		11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	CD7	P09564	240 aa		11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	FCGR2B	P31994	310 aa	Predicted RBP	11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	CD81	P60033	236 aa		11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	KLF9	Q13886	244 aa	Predicted RBP	11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	AARD	Q4LEZ3	155 aa		11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	PYDC2	Q56P42	97 aa		11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	ZNF57	Q68EA5	555 aa	Predicted RBP	11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	BTNL8	Q6UX41	500 aa		11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	CCDC190	Q86UF4	302 aa		11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	SELENOH	Q8IZQ5	122 aa	Known RBP	11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	UBAC2	Q8NBM4	344 aa		11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	RCHY1	Q96PM5	261 aa		11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	NEURL2	Q9BR09	285 aa		11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	MRPL27	Q9P0M9	148 aa	Known RBP	11.65	□□□□□ -0.54
PLD3-223	ENST00000600948	MT-CO2	P00403	227 aa		11.64	□□□□□ -0.55
PLD3-223	ENST00000600948	S100A5	P33763	92 aa		11.64	□□□□□ -0.55
PLD3-223	ENST00000600948	ETV6	P41212	452 aa		11.64	□□□□□ -0.55
PLD3-223	ENST00000600948	MFAP4	P55083	255 aa		11.64	□□□□□ -0.55
PLD3-223	ENST00000600948	GUCA2B	Q16661	112 aa		11.64	□□□□□ -0.55
PLD3-223	ENST00000600948	TMEM268	Q5VZI3	342 aa		11.64	□□□□□ -0.55
PLD3-223	ENST00000600948	PVRIG	Q6DKI7	326 aa		11.64	□□□□□ -0.55
PLD3-223	ENST00000600948	GALNT14	Q96FL9	552 aa		11.64	□□□□□ -0.55
PLD3-223	ENST00000600948	TXN2	Q99757	166 aa		11.64	□□□□□ -0.55
PLD3-223	ENST00000600948	TM2D3	Q9BRN9	247 aa		11.64	□□□□□ -0.55
PLD3-223	ENST00000600948	PDCD10	Q9BUL8	212 aa		11.64	□□□□□ -0.55
PLD3-223	ENST00000600948	GAR1	Q9NY12	217 aa	Known RBP	11.64	□□□□□ -0.55
PLD3-223	ENST00000600948	TMEM56-RWDD3	S4R434	201 aa		11.64	□□□□□ -0.55
PLD3-223	ENST00000600948	IGHV3-48	P01763	117 aa		11.63	□□□□□ -0.55
PLD3-223	ENST00000600948	RNASE2	P10153	161 aa	Known RBP	11.63	□□□□□ -0.55
PLD3-223	ENST00000600948	FAU	P35544	74 aa	Known RBP	11.63	□□□□□ -0.55
PLD3-223	ENST00000600948	SNCA	P37840	140 aa		11.63	□□□□□ -0.55
PLD3-223	ENST00000600948	HOXA1	P49639	335 aa	Predicted RBP	11.63	□□□□□ -0.55
PLD3-223	ENST00000600948	AP3S2	P59780	193 aa		11.63	□□□□□ -0.55
PLD3-223	ENST00000600948	TMEM187	Q14656	261 aa		11.63	□□□□□ -0.55
PLD3-223	ENST00000600948	PINX1	Q96BK5	328 aa	Known RBP	11.63	□□□□□ -0.55
PLD3-223	ENST00000600948	GPR146	Q96CH1	333 aa		11.63	□□□□□ -0.55
PLD3-223	ENST00000600948	SCGB3A2	Q96PL1	93 aa		11.63	□□□□□ -0.55
PLD3-223	ENST00000600948	WFDC10A	Q9H1F0	79 aa		11.63	□□□□□ -0.55
PLD3-223	ENST00000600948	TUBA4B	Q9H853	241 aa		11.63	□□□□□ -0.55
PLD3-223	ENST00000600948	ZMAT4	Q9H898	229 aa		11.63	□□□□□ -0.55
PLD3-223	ENST00000600948	DAZ1	Q9NQZ3	744 aa	Known RBP	11.63	□□□□□ -0.55
PLD3-223	ENST00000600948	NUPL2	O15504	423 aa	Known RBP	11.62	□□□□□ -0.55
PLD3-223	ENST00000600948	SCAF4	O95104	1147 aa	Known RBP	11.62	□□□□□ -0.55
PLD3-223	ENST00000600948	SPCS3	P61009	180 aa		11.62	□□□□□ -0.55
PLD3-223	ENST00000600948	SUPT4H1	P63272	117 aa	Known RBP	11.62	□□□□□ -0.55
PLD3-223	ENST00000600948	TOMM5	Q8N4H5	51 aa		11.62	□□□□□ -0.55
PLD3-223	ENST00000600948	OR52E5	Q8NH55	327 aa		11.62	□□□□□ -0.55
PLD3-223	ENST00000600948	IL22RA2	Q969J5	263 aa		11.62	□□□□□ -0.55
PLD3-223	ENST00000600948	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.62	□□□□□ -0.55
PLD3-223	ENST00000600948	PRR13	Q9NZ81	148 aa		11.62	□□□□□ -0.55
PLD3-223	ENST00000600948	CACNG5	Q9UF02	275 aa		11.62	□□□□□ -0.55
PLD3-223	ENST00000600948	KCNIP3	Q9Y2W7	256 aa		11.62	□□□□□ -0.55
PLD3-223	ENST00000600948	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.62	□□□□□ -0.55
PLD3-223	ENST00000600948	IGHV3OR16-8	A0A075B7F1	116 aa		11.61	□□□□□ -0.55
PLD3-223	ENST00000600948	TRAV25	A0A0B4J276	109 aa		11.61	□□□□□ -0.55
PLD3-223	ENST00000600948		K7EMT4	169 aa		11.61	□□□□□ -0.55
PLD3-223	ENST00000600948	REL	Q04864	619 aa	Predicted RBP	11.61	□□□□□ -0.55
PLD3-223	ENST00000600948	HAGH	Q16775	308 aa		11.61	□□□□□ -0.55
PLD3-223	ENST00000600948	BSX	Q3C1V8	233 aa		11.61	□□□□□ -0.55
PLD3-223	ENST00000600948	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.61	□□□□□ -0.55
PLD3-223	ENST00000600948	DEFB125	Q8N687	156 aa		11.61	□□□□□ -0.55
PLD3-223	ENST00000600948	C20orf24	Q9BUV8	137 aa		11.61	□□□□□ -0.55
PLD3-223	ENST00000600948	ENY2	Q9NPA8	101 aa		11.61	□□□□□ -0.55
PLD3-223	ENST00000600948	C15orf62	A8K5M9	175 aa		11.6	□□□□□ -0.55
PLD3-223	ENST00000600948	OR11H12	B2RN74	326 aa		11.6	□□□□□ -0.55
PLD3-223	ENST00000600948	ZNF207	O43670	478 aa	Known RBP	11.6	□□□□□ -0.55
PLD3-223	ENST00000600948	GNG7	O60262	68 aa		11.6	□□□□□ -0.55
PLD3-223	ENST00000600948	AKR1C4	P17516	323 aa		11.6	□□□□□ -0.55
PLD3-223	ENST00000600948	SUB1	P53999	127 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
PLD3-223	ENST00000600948	DEDD2	Q8WXF8	326 aa		11.6	□□□□□ -0.55
PLD3-223	ENST00000600948	SRR	Q9GZT4	340 aa		11.6	□□□□□ -0.55
PLD3-223	ENST00000600948	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.6	□□□□□ -0.55
PLD3-223	ENST00000600948	CORT	O00230	105 aa		11.59	□□□□□ -0.55
PLD3-223	ENST00000600948	NPBWR1	P48145	328 aa		11.59	□□□□□ -0.55
PLD3-223	ENST00000600948	NMS	Q5H8A3	153 aa		11.59	□□□□□ -0.55
PLD3-223	ENST00000600948	SPANXN2	Q5MJ10	180 aa		11.59	□□□□□ -0.55
PLD3-223	ENST00000600948	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.59	□□□□□ -0.55
PLD3-223	ENST00000600948	SLC16A13	Q7RTY0	426 aa		11.59	□□□□□ -0.55
PLD3-223	ENST00000600948	DUSP18	Q8NEJ0	188 aa		11.59	□□□□□ -0.55
PLD3-223	ENST00000600948	OR52B4	Q8NGK2	314 aa		11.59	□□□□□ -0.55
PLD3-223	ENST00000600948	OR10C1	Q96KK4	312 aa		11.59	□□□□□ -0.55
PLD3-223	ENST00000600948	SRD5A3	Q9H8P0	318 aa		11.59	□□□□□ -0.55
PLD3-223	ENST00000600948	NBEAL2	Q6ZNJ1	2754 aa		11.59	□□□□□ -0.55
PLD3-223	ENST00000600948		A0A0B4J2A0	478 aa		11.58	□□□□□ -0.56
PLD3-223	ENST00000600948	RBMY1B	A6NDE4	496 aa	Known RBP	11.58	□□□□□ -0.56
PLD3-223	ENST00000600948	RBMY1E	A6NEQ0	496 aa	Known RBP	11.58	□□□□□ -0.56
PLD3-223	ENST00000600948	RBMY1D	P0C7P1	496 aa	Known RBP	11.58	□□□□□ -0.56
PLD3-223	ENST00000600948	SULT1A3	P0DMM9	295 aa		11.58	□□□□□ -0.56
PLD3-223	ENST00000600948	SULT1A4	P0DMN0	295 aa		11.58	□□□□□ -0.56
PLD3-223	ENST00000600948	ANKRD55	Q3KP44	614 aa		11.58	□□□□□ -0.56
PLD3-223	ENST00000600948	LYZL2	Q7Z4W2	148 aa		11.58	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms