RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 C8orf88P0DMB2 117 aa12.67□□□□□ -0.38
NOTCH3-205ENST00000600841 MFAP4P55083 255 aa12.67□□□□□ -0.38
NOTCH3-205ENST00000600841 BTNL8Q6UX41 500 aa12.67□□□□□ -0.38
NOTCH3-205ENST00000600841 TMEM61Q8N0U2 210 aa12.67□□□□□ -0.38
NOTCH3-205ENST00000600841 TM2D3Q9BRN9 247 aa12.67□□□□□ -0.38
NOTCH3-205ENST00000600841 GPR132Q9UNW8 380 aa12.67□□□□□ -0.38
NOTCH3-205ENST00000600841 KMT2CQ8NEZ4 4911 aaKnown RBP12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 DNAH7Q8WXX0 4024 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 CRYM-AS1A6NIL9 109 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 NDUFA4O00483 81 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 NUPL2O15504 423 aaKnown RBP12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 CDS2O95674 445 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 MT-CO2P00403 227 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 CD7P09564 240 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 S100A5P33763 92 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 ADMP35318 185 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 SNCAP37840 140 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 DHODHQ02127 395 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 SLC16A13Q7RTY0 426 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 FAM219AQ8IW50 185 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 GLYATL2Q8WU03 294 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 PINX1Q96BK5 328 aaKnown RBP12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 SCGB3A2Q96PL1 93 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 TXN2Q99757 166 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 C20orf24Q9BUV8 137 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 DAZ1Q9NQZ3 744 aaKnown RBP12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 MCUBQ9NWR8 336 aa12.66□□□□□ -0.38
NOTCH3-205ENST00000600841 TRAV25A0A0B4J276 109 aa12.65□□□□□ -0.38
NOTCH3-205ENST00000600841 INS-IGF2F8WCM5 200 aa12.65□□□□□ -0.38
NOTCH3-205ENST00000600841 SCAF4O95104 1147 aaKnown RBP12.65□□□□□ -0.38
NOTCH3-205ENST00000600841 CTSGP08311 255 aa12.65□□□□□ -0.38
NOTCH3-205ENST00000600841 FCGR2BP31994 310 aaPredicted RBP12.65□□□□□ -0.38
NOTCH3-205ENST00000600841 HOXA1P49639 335 aaPredicted RBP12.65□□□□□ -0.38
NOTCH3-205ENST00000600841 RELQ04864 619 aaPredicted RBP12.65□□□□□ -0.38
NOTCH3-205ENST00000600841 HAGHQ16775 308 aa12.65□□□□□ -0.38
NOTCH3-205ENST00000600841 RBPMS2Q6ZRY4 209 aaKnown RBP12.65□□□□□ -0.38
NOTCH3-205ENST00000600841 RBPMSQ93062 196 aaKnown RBP12.65□□□□□ -0.38
NOTCH3-205ENST00000600841 ENY2Q9NPA8 101 aa12.65□□□□□ -0.38
NOTCH3-205ENST00000600841 NBEAL2Q6ZNJ1 2754 aa12.64□□□□□ -0.39
NOTCH3-205ENST00000600841 A0A0G2JRQ6 117 aa12.64□□□□□ -0.39
NOTCH3-205ENST00000600841 OR11H12B2RN74 326 aa12.64□□□□□ -0.39
NOTCH3-205ENST00000600841 IGHV3-48P01763 117 aa12.64□□□□□ -0.39
NOTCH3-205ENST00000600841 ETV6P41212 452 aa12.64□□□□□ -0.39
NOTCH3-205ENST00000600841 SUB1P53999 127 aaKnown RBP eCLIP12.64□□□□□ -0.39
NOTCH3-205ENST00000600841 ANKRD55Q3KP44 614 aa12.64□□□□□ -0.39
NOTCH3-205ENST00000600841 PYDC2Q56P42 97 aa12.64□□□□□ -0.39
NOTCH3-205ENST00000600841 SELENOHQ8IZQ5 122 aaKnown RBP12.64□□□□□ -0.39
NOTCH3-205ENST00000600841 DEFB125Q8N687 156 aa12.64□□□□□ -0.39
NOTCH3-205ENST00000600841 OR52B4Q8NGK2 314 aa12.64□□□□□ -0.39
NOTCH3-205ENST00000600841 LHFPL5Q8TAF8 219 aa12.64□□□□□ -0.39
NOTCH3-205ENST00000600841 SPATA25Q9BR10 227 aa12.64□□□□□ -0.39
NOTCH3-205ENST00000600841 KCNIP3Q9Y2W7 256 aa12.64□□□□□ -0.39
NOTCH3-205ENST00000600841 K7EMT4 169 aa12.63□□□□□ -0.39
NOTCH3-205ENST00000600841 GNG7O60262 68 aa12.63□□□□□ -0.39
NOTCH3-205ENST00000600841 FAUP35544 74 aaKnown RBP12.63□□□□□ -0.39
NOTCH3-205ENST00000600841 SPCS3P61009 180 aa12.63□□□□□ -0.39
NOTCH3-205ENST00000600841 TMEM268Q5VZI3 342 aa12.63□□□□□ -0.39
NOTCH3-205ENST00000600841 Q6ZRM9 215 aa12.63□□□□□ -0.39
NOTCH3-205ENST00000600841 WFDC10AQ9H1F0 79 aa12.63□□□□□ -0.39
NOTCH3-205ENST00000600841 SRD5A3Q9H8P0 318 aa12.63□□□□□ -0.39
NOTCH3-205ENST00000600841 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.63□□□□□ -0.39
NOTCH3-205ENST00000600841 IGHV3OR16-8A0A075B7F1 116 aa12.62□□□□□ -0.39
NOTCH3-205ENST00000600841 C15orf62A8K5M9 175 aa12.62□□□□□ -0.39
NOTCH3-205ENST00000600841 CORTO00230 105 aa12.62□□□□□ -0.39
NOTCH3-205ENST00000600841 ZNF207O43670 478 aaKnown RBP12.62□□□□□ -0.39
NOTCH3-205ENST00000600841 YIF1AO95070 293 aa12.62□□□□□ -0.39
NOTCH3-205ENST00000600841 AP3S2P59780 193 aa12.62□□□□□ -0.39
NOTCH3-205ENST00000600841 AARDQ4LEZ3 155 aa12.62□□□□□ -0.39
NOTCH3-205ENST00000600841 DUSP18Q8NEJ0 188 aa12.62□□□□□ -0.39
NOTCH3-205ENST00000600841 CACNG5Q9UF02 275 aa12.62□□□□□ -0.39
NOTCH3-205ENST00000600841 TMEM56-RWDD3S4R434 201 aa12.62□□□□□ -0.39
NOTCH3-205ENST00000600841 V9GYH0 126 aa12.62□□□□□ -0.39
NOTCH3-205ENST00000600841 C3orf84H3BNL1 204 aa12.61□□□□□ -0.39
NOTCH3-205ENST00000600841 RNASE2P10153 161 aaKnown RBP12.61□□□□□ -0.39
NOTCH3-205ENST00000600841 NPBWR1P48145 328 aa12.61□□□□□ -0.39
NOTCH3-205ENST00000600841 KLF9Q13886 244 aaPredicted RBP12.61□□□□□ -0.39
NOTCH3-205ENST00000600841 PVRIGQ6DKI7 326 aa12.61□□□□□ -0.39
NOTCH3-205ENST00000600841 LAMTOR1Q6IAA8 161 aa12.61□□□□□ -0.39
NOTCH3-205ENST00000600841 LINC00322Q6ZN03 302 aaPredicted RBP12.61□□□□□ -0.39
NOTCH3-205ENST00000600841 TOMM5Q8N4H5 51 aa12.61□□□□□ -0.39
NOTCH3-205ENST00000600841 OR52E5Q8NH55 327 aa12.61□□□□□ -0.39
NOTCH3-205ENST00000600841 IL22RA2Q969J5 263 aa12.61□□□□□ -0.39
NOTCH3-205ENST00000600841 TRIM63Q969Q1 353 aa12.61□□□□□ -0.39
NOTCH3-205ENST00000600841 TMEM230Q96A57 120 aa12.61□□□□□ -0.39
NOTCH3-205ENST00000600841 GALNT14Q96FL9 552 aa12.61□□□□□ -0.39
NOTCH3-205ENST00000600841 RBMY1BA6NDE4 496 aaKnown RBP12.6□□□□□ -0.39
NOTCH3-205ENST00000600841 RBMY1EA6NEQ0 496 aaKnown RBP12.6□□□□□ -0.39
NOTCH3-205ENST00000600841 RBMY1DP0C7P1 496 aaKnown RBP12.6□□□□□ -0.39
NOTCH3-205ENST00000600841 AKR1C4P17516 323 aa12.6□□□□□ -0.39
NOTCH3-205ENST00000600841 TMEM187Q14656 261 aa12.6□□□□□ -0.39
NOTCH3-205ENST00000600841 GPR146Q96CH1 333 aa12.6□□□□□ -0.39
NOTCH3-205ENST00000600841 CITED4Q96RK1 184 aa12.6□□□□□ -0.39
NOTCH3-205ENST00000600841 SPAG8Q99932 426 aaPredicted RBP12.6□□□□□ -0.39
NOTCH3-205ENST00000600841 TSPAN4O14817 238 aa12.59□□□□□ -0.39
NOTCH3-205ENST00000600841 ANXA3P12429 323 aa12.59□□□□□ -0.39
NOTCH3-205ENST00000600841 OPRK1P41145 380 aa12.59□□□□□ -0.39
NOTCH3-205ENST00000600841 HTR2BP41595 481 aa12.59□□□□□ -0.39
NOTCH3-205ENST00000600841 ZNF79Q15937 498 aa12.59□□□□□ -0.39
NOTCH3-205ENST00000600841 CCDC190Q86UF4 302 aa12.59□□□□□ -0.39
NOTCH3-205ENST00000600841 MUC7Q8TAX7 377 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms