RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 C1QL4Q86Z23 238 aa10.02□□□□□ -0.81
SRRM1-223ENST00000600523 DLX4Q92988 240 aaPredicted RBP10.02□□□□□ -0.81
SRRM1-223ENST00000600523 PINX1Q96BK5 328 aaKnown RBP10.02□□□□□ -0.81
SRRM1-223ENST00000600523 ATP6V0BQ99437 205 aa10.02□□□□□ -0.81
SRRM1-223ENST00000600523 GPN1Q9HCN4 374 aaPredicted RBP10.02□□□□□ -0.81
SRRM1-223ENST00000600523 C21orf62Q9NYP8 219 aa10.02□□□□□ -0.81
SRRM1-223ENST00000600523 RPS10-NUDT3A0A1W2PQS6 291 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 WRBO00258 174 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 SAP30O75446 220 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 NXPH3O95157 252 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 LY86O95711 162 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 IGHV3-23P01764 117 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 CLEC3BP05452 202 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 GPR183P32249 361 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 ATP5IP56385 69 aaPredicted RBP10.01□□□□□ -0.81
SRRM1-223ENST00000600523 SYNJ2BPP57105 145 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 RPP30P78346 268 aaKnown RBP10.01□□□□□ -0.81
SRRM1-223ENST00000600523 DCTN2Q13561 401 aaKnown RBP10.01□□□□□ -0.81
SRRM1-223ENST00000600523 SPSB3Q6PJ21 355 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 REC114Q7Z4M0 266 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 UBAC2Q8NBM4 344 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 OR9G4Q8NGQ1 327 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 DTD1Q8TEA8 209 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 BSCL2Q96G97 398 aaPredicted RBP10.01□□□□□ -0.81
SRRM1-223ENST00000600523 CIB3Q96Q77 187 aaPredicted RBP10.01□□□□□ -0.81
SRRM1-223ENST00000600523 TXN2Q99757 166 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 HSPB7Q9UBY9 170 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 TBC1D24Q9ULP9 559 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 S4R3C0 116 aa10.01□□□□□ -0.81
SRRM1-223ENST00000600523 MFSD2BA6NFX1 497 aa10□□□□□ -0.81
SRRM1-223ENST00000600523 NUPL2O15504 423 aaKnown RBP10□□□□□ -0.81
SRRM1-223ENST00000600523 IFNA10P01566 189 aa10□□□□□ -0.81
SRRM1-223ENST00000600523 OPRK1P41145 380 aa10□□□□□ -0.81
SRRM1-223ENST00000600523 NPBWR1P48145 328 aa10□□□□□ -0.81
SRRM1-223ENST00000600523 MFAP4P55083 255 aa10□□□□□ -0.81
SRRM1-223ENST00000600523 KLF5Q13887 457 aaPredicted RBP10□□□□□ -0.81
SRRM1-223ENST00000600523 GGNBP1Q5YKI7 109 aa10□□□□□ -0.81
SRRM1-223ENST00000600523 UXS1Q8NBZ7 420 aa10□□□□□ -0.81
SRRM1-223ENST00000600523 DUSP18Q8NEJ0 188 aa10□□□□□ -0.81
SRRM1-223ENST00000600523 SLC24A4Q8NFF2 622 aa10□□□□□ -0.81
SRRM1-223ENST00000600523 ZNF502Q8TBZ5 544 aa10□□□□□ -0.81
SRRM1-223ENST00000600523 SCARB1Q8WTV0 552 aa10□□□□□ -0.81
SRRM1-223ENST00000600523 MITD1Q8WV92 249 aa10□□□□□ -0.81
SRRM1-223ENST00000600523 U3KQ87 197 aa10□□□□□ -0.81
SRRM1-223ENST00000600523 ZNF320A2RRD8 509 aa9.99□□□□□ -0.81
SRRM1-223ENST00000600523 PPP5D1E7EU14 171 aa9.99□□□□□ -0.81
SRRM1-223ENST00000600523 BMPR1BO00238 502 aa9.99□□□□□ -0.81
SRRM1-223ENST00000600523 GNG7O60262 68 aa9.99□□□□□ -0.81
SRRM1-223ENST00000600523 MT-CO2P00403 227 aa9.99□□□□□ -0.81
SRRM1-223ENST00000600523 TRBV12-3P01733 135 aa9.99□□□□□ -0.81
SRRM1-223ENST00000600523 RAB11AP62491 216 aa9.99□□□□□ -0.81
SRRM1-223ENST00000600523 DEFA6Q01524 100 aa9.99□□□□□ -0.81
SRRM1-223ENST00000600523 BEAN1Q3B7T3 259 aa9.99□□□□□ -0.81
SRRM1-223ENST00000600523 KPRPQ5T749 579 aaPredicted RBP9.99□□□□□ -0.81
SRRM1-223ENST00000600523 ETFRF1Q6IPR1 90 aa9.99□□□□□ -0.81
SRRM1-223ENST00000600523 ACSM6Q6P461 480 aa9.99□□□□□ -0.81
SRRM1-223ENST00000600523 GPHB5Q86YW7 130 aa9.99□□□□□ -0.81
SRRM1-223ENST00000600523 RNASEH2CQ8TDP1 164 aaKnown RBP9.99□□□□□ -0.81
SRRM1-223ENST00000600523 ZNF431Q8TF32 576 aaPredicted RBP9.99□□□□□ -0.81
SRRM1-223ENST00000600523 CCDC140Q96MF4 163 aa9.99□□□□□ -0.81
SRRM1-223ENST00000600523 PALMDQ9NP74 551 aa9.99□□□□□ -0.81
SRRM1-223ENST00000600523 DMRT1Q9Y5R6 373 aa9.99□□□□□ -0.81
SRRM1-223ENST00000600523 IGHV3-21A0A0B4J1V1 117 aa9.98□□□□□ -0.81
SRRM1-223ENST00000600523 OR2T8A6NH00 312 aa9.98□□□□□ -0.81
SRRM1-223ENST00000600523 K7EIM0 57 aa9.98□□□□□ -0.81
SRRM1-223ENST00000600523 TGOLN2O43493 480 aa9.98□□□□□ -0.81
SRRM1-223ENST00000600523 PRAF2O60831 178 aa9.98□□□□□ -0.81
SRRM1-223ENST00000600523 OR2C1O95371 312 aa9.98□□□□□ -0.81
SRRM1-223ENST00000600523 RNASE2P10153 161 aaKnown RBP9.98□□□□□ -0.81
SRRM1-223ENST00000600523 NPY1RP25929 384 aa9.98□□□□□ -0.81
SRRM1-223ENST00000600523 MFAP2P55001 183 aa9.98□□□□□ -0.81
SRRM1-223ENST00000600523 RELQ04864 619 aaPredicted RBP9.98□□□□□ -0.81
SRRM1-223ENST00000600523 C2orf83Q53S99 150 aa9.98□□□□□ -0.81
SRRM1-223ENST00000600523 C12orf45Q8N5I9 185 aaPredicted RBP9.98□□□□□ -0.81
SRRM1-223ENST00000600523 RBKSQ9H477 322 aa9.98□□□□□ -0.81
SRRM1-223ENST00000600523 FBN3Q75N90 2809 aa9.97□□□□□ -0.81
SRRM1-223ENST00000600523 TRRAPQ9Y4A5 3859 aa9.97□□□□□ -0.81
SRRM1-223ENST00000600523 I3L2K1 104 aa9.97□□□□□ -0.81
SRRM1-223ENST00000600523 LGALS9O00182 355 aa9.97□□□□□ -0.81
SRRM1-223ENST00000600523 SYNGR2O43760 224 aa9.97□□□□□ -0.81
SRRM1-223ENST00000600523 PITX3O75364 302 aa9.97□□□□□ -0.81
SRRM1-223ENST00000600523 ADAP1O75689 374 aa9.97□□□□□ -0.81
SRRM1-223ENST00000600523 IFNA4P05014 189 aa9.97□□□□□ -0.81
SRRM1-223ENST00000600523 IL5P05113 134 aa9.97□□□□□ -0.81
SRRM1-223ENST00000600523 NKX2-1P43699 371 aaPredicted RBP9.97□□□□□ -0.81
SRRM1-223ENST00000600523 IAH1Q2TAA2 248 aaPredicted RBP9.97□□□□□ -0.81
SRRM1-223ENST00000600523 NRARPQ7Z6K4 114 aa9.97□□□□□ -0.81
SRRM1-223ENST00000600523 OR52B4Q8NGK2 314 aa9.97□□□□□ -0.81
SRRM1-223ENST00000600523 ZC4H2Q9NQZ6 224 aa9.97□□□□□ -0.81
SRRM1-223ENST00000600523 PAIP2BQ9ULR5 123 aaKnown RBP9.97□□□□□ -0.81
SRRM1-223ENST00000600523 UFC1Q9Y3C8 167 aa9.97□□□□□ -0.81
SRRM1-223ENST00000600523 PKD1L1Q8TDX9 2849 aa9.97□□□□□ -0.81
SRRM1-223ENST00000600523 VWFP04275 2813 aa9.97□□□□□ -0.81
SRRM1-223ENST00000600523 TRAV30A0A087WSZ9 112 aa9.96□□□□□ -0.82
SRRM1-223ENST00000600523 C5orf51A6NDU8 294 aa9.96□□□□□ -0.82
SRRM1-223ENST00000600523 FAM25EA8MYX2 175 aa9.96□□□□□ -0.82
SRRM1-223ENST00000600523 INMT-MINDY4F8WBC2 141 aa9.96□□□□□ -0.82
SRRM1-223ENST00000600523 WIPF1O43516 503 aa9.96□□□□□ -0.82
SRRM1-223ENST00000600523 SLC25A4P12235 298 aa9.96□□□□□ -0.82
SRRM1-223ENST00000600523 FCGR2BP31994 310 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms