RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 DCUN1D4Q92564 292 aa10.54□□□□□ -0.72
VRK3-219ENST00000600137 PDCD10Q9BUL8 212 aa10.54□□□□□ -0.72
VRK3-219ENST00000600137 PALMDQ9NP74 551 aa10.54□□□□□ -0.72
VRK3-219ENST00000600137 IGHV3-21A0A0B4J1V1 117 aa10.53□□□□□ -0.72
VRK3-219ENST00000600137 FAM90A26D6RGX4 464 aa10.53□□□□□ -0.72
VRK3-219ENST00000600137 OR8U8P0C7N1 319 aa10.53□□□□□ -0.72
VRK3-219ENST00000600137 IGLL1P15814 213 aa10.53□□□□□ -0.72
VRK3-219ENST00000600137 HOXD3P31249 432 aaPredicted RBP10.53□□□□□ -0.72
VRK3-219ENST00000600137 IL15RAQ13261 267 aa10.53□□□□□ -0.72
VRK3-219ENST00000600137 MLANAQ16655 118 aa10.53□□□□□ -0.72
VRK3-219ENST00000600137 OXLD1Q5BKU9 147 aa10.53□□□□□ -0.72
VRK3-219ENST00000600137 SAMD5Q5TGI4 173 aa10.53□□□□□ -0.72
VRK3-219ENST00000600137 PLET1Q6UQ28 207 aa10.53□□□□□ -0.72
VRK3-219ENST00000600137 OR1S1Q8NH92 325 aa10.53□□□□□ -0.72
VRK3-219ENST00000600137 DPF1Q92782 380 aa10.53□□□□□ -0.72
VRK3-219ENST00000600137 FNDC4Q9H6D8 234 aaPredicted RBP10.53□□□□□ -0.72
VRK3-219ENST00000600137 TRBV7-1A0A0A6YYK4 115 aa10.52□□□□□ -0.73
VRK3-219ENST00000600137 CEBPZOSA8MTT3 80 aa10.52□□□□□ -0.73
VRK3-219ENST00000600137 SNRPGP15A8MWD9 76 aa10.52□□□□□ -0.73
VRK3-219ENST00000600137 PPP5D1E7EU14 171 aa10.52□□□□□ -0.73
VRK3-219ENST00000600137 G3V4G9 280 aa10.52□□□□□ -0.73
VRK3-219ENST00000600137 MT-CO2P00403 227 aa10.52□□□□□ -0.73
VRK3-219ENST00000600137 CLEC3BP05452 202 aa10.52□□□□□ -0.73
VRK3-219ENST00000600137 CD33P20138 364 aa10.52□□□□□ -0.73
VRK3-219ENST00000600137 SNCAP37840 140 aa10.52□□□□□ -0.73
VRK3-219ENST00000600137 HOXA1P49639 335 aaPredicted RBP10.52□□□□□ -0.73
VRK3-219ENST00000600137 C2orf83Q53S99 150 aa10.52□□□□□ -0.73
VRK3-219ENST00000600137 CLEC19AQ6UXS0 136 aa10.52□□□□□ -0.73
VRK3-219ENST00000600137 DTD1Q8TEA8 209 aa10.52□□□□□ -0.73
VRK3-219ENST00000600137 EEF1AKMT3Q96AZ1 226 aa10.52□□□□□ -0.73
VRK3-219ENST00000600137 CXorf58Q96LI9 332 aa10.52□□□□□ -0.73
VRK3-219ENST00000600137 HEYLQ9NQ87 328 aaPredicted RBP10.52□□□□□ -0.73
VRK3-219ENST00000600137 THYN1Q9P016 225 aa10.52□□□□□ -0.73
VRK3-219ENST00000600137 MRPL36Q9P0J6 103 aaKnown RBP10.52□□□□□ -0.73
VRK3-219ENST00000600137 CACFD1Q9UGQ2 172 aa10.52□□□□□ -0.73
VRK3-219ENST00000600137 CCSO14618 274 aa10.51□□□□□ -0.73
VRK3-219ENST00000600137 WIPF1O43516 503 aa10.51□□□□□ -0.73
VRK3-219ENST00000600137 TMEM50AO95807 157 aa10.51□□□□□ -0.73
VRK3-219ENST00000600137 PTTG1O95997 202 aa10.51□□□□□ -0.73
VRK3-219ENST00000600137 FCGR2BP31994 310 aaPredicted RBP10.51□□□□□ -0.73
VRK3-219ENST00000600137 ADMP35318 185 aa10.51□□□□□ -0.73
VRK3-219ENST00000600137 HTR2BP41595 481 aa10.51□□□□□ -0.73
VRK3-219ENST00000600137 IL34Q6ZMJ4 242 aa10.51□□□□□ -0.73
VRK3-219ENST00000600137 ZBTB8BQ8NAP8 495 aaPredicted RBP10.51□□□□□ -0.73
VRK3-219ENST00000600137 ATP6V0BQ99437 205 aa10.51□□□□□ -0.73
VRK3-219ENST00000600137 MAGT1Q9H0U3 335 aa10.51□□□□□ -0.73
VRK3-219ENST00000600137 OVOL1O14753 267 aa10.5□□□□□ -0.73
VRK3-219ENST00000600137 CYB5BO43169 146 aa10.5□□□□□ -0.73
VRK3-219ENST00000600137 SYNGR2O43760 224 aa10.5□□□□□ -0.73
VRK3-219ENST00000600137 PRAF2O60831 178 aa10.5□□□□□ -0.73
VRK3-219ENST00000600137 OR2C1O95371 312 aa10.5□□□□□ -0.73
VRK3-219ENST00000600137 IFNA21P01568 189 aa10.5□□□□□ -0.73
VRK3-219ENST00000600137 IGHV3-48P01763 117 aa10.5□□□□□ -0.73
VRK3-219ENST00000600137 CTSGP08311 255 aa10.5□□□□□ -0.73
VRK3-219ENST00000600137 ZP3P21754 424 aa10.5□□□□□ -0.73
VRK3-219ENST00000600137 PAX9P55771 341 aa10.5□□□□□ -0.73
VRK3-219ENST00000600137 IAH1Q2TAA2 248 aaPredicted RBP10.5□□□□□ -0.73
VRK3-219ENST00000600137 KPRPQ5T749 579 aaPredicted RBP10.5□□□□□ -0.73
VRK3-219ENST00000600137 MISP3Q96FF7 219 aa10.5□□□□□ -0.73
VRK3-219ENST00000600137 RCC1LQ96I51 464 aaKnown RBP10.5□□□□□ -0.73
VRK3-219ENST00000600137 CHRDL1Q9BU40 450 aa10.5□□□□□ -0.73
VRK3-219ENST00000600137 ENY2Q9NPA8 101 aa10.5□□□□□ -0.73
VRK3-219ENST00000600137 C21orf62Q9NYP8 219 aa10.5□□□□□ -0.73
VRK3-219ENST00000600137 U3KQ87 197 aa10.5□□□□□ -0.73
VRK3-219ENST00000600137 C7orf66A4D0T2 115 aa10.49□□□□□ -0.73
VRK3-219ENST00000600137 C15orf62A8K5M9 175 aa10.49□□□□□ -0.73
VRK3-219ENST00000600137 IAPPP10997 89 aa10.49□□□□□ -0.73
VRK3-219ENST00000600137 GPR183P32249 361 aa10.49□□□□□ -0.73
VRK3-219ENST00000600137 SUB1P53999 127 aaKnown RBP eCLIP10.49□□□□□ -0.73
VRK3-219ENST00000600137 POLR2GP62487 172 aaKnown RBP eCLIP10.49□□□□□ -0.73
VRK3-219ENST00000600137 DCTN2Q13561 401 aaKnown RBP10.49□□□□□ -0.73
VRK3-219ENST00000600137 BEAN1Q3B7T3 259 aa10.49□□□□□ -0.73
VRK3-219ENST00000600137 FAM209BQ5JX69 171 aa10.49□□□□□ -0.73
VRK3-219ENST00000600137 ACSM6Q6P461 480 aa10.49□□□□□ -0.73
VRK3-219ENST00000600137 ADAMTSL5Q6ZMM2 481 aa10.49□□□□□ -0.73
VRK3-219ENST00000600137 GPHB5Q86YW7 130 aa10.49□□□□□ -0.73
VRK3-219ENST00000600137 UXS1Q8NBZ7 420 aa10.49□□□□□ -0.73
VRK3-219ENST00000600137 SLC24A4Q8NFF2 622 aa10.49□□□□□ -0.73
VRK3-219ENST00000600137 HIPK2Q9H2X6 1198 aa10.49□□□□□ -0.73
VRK3-219ENST00000600137 C11orf1Q9H5F2 150 aa10.49□□□□□ -0.73
VRK3-219ENST00000600137 TGOLN2O43493 480 aa10.48□□□□□ -0.73
VRK3-219ENST00000600137 GGCTO75223 188 aaKnown RBP10.48□□□□□ -0.73
VRK3-219ENST00000600137 MBPP02686 304 aaPredicted RBP10.48□□□□□ -0.73
VRK3-219ENST00000600137 NPY1RP25929 384 aa10.48□□□□□ -0.73
VRK3-219ENST00000600137 ARL3P36405 182 aa10.48□□□□□ -0.73
VRK3-219ENST00000600137 NKX2-1P43699 371 aaPredicted RBP10.48□□□□□ -0.73
VRK3-219ENST00000600137 ATP5IP56385 69 aaPredicted RBP10.48□□□□□ -0.73
VRK3-219ENST00000600137 SYNJ2BPP57105 145 aa10.48□□□□□ -0.73
VRK3-219ENST00000600137 C1QL4Q86Z23 238 aa10.48□□□□□ -0.73
VRK3-219ENST00000600137 PINX1Q96BK5 328 aaKnown RBP10.48□□□□□ -0.73
VRK3-219ENST00000600137 WDR89Q96FK6 387 aaPredicted RBP10.48□□□□□ -0.73
VRK3-219ENST00000600137 C2orf50Q96LR7 162 aa10.48□□□□□ -0.73
VRK3-219ENST00000600137 OR4C12Q96R67 309 aa10.48□□□□□ -0.73
VRK3-219ENST00000600137 TXN2Q99757 166 aa10.48□□□□□ -0.73
VRK3-219ENST00000600137 GPN1Q9HCN4 374 aaPredicted RBP10.48□□□□□ -0.73
VRK3-219ENST00000600137 ZC4H2Q9NQZ6 224 aa10.48□□□□□ -0.73
VRK3-219ENST00000600137 RCL1Q9Y2P8 373 aaKnown RBP10.48□□□□□ -0.73
VRK3-219ENST00000600137 OR2T8A6NH00 312 aa10.47□□□□□ -0.73
VRK3-219ENST00000600137 PRSS46E5RG02 174 aa10.47□□□□□ -0.73
VRK3-219ENST00000600137 WRBO00258 174 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms