RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-231ENST00000599082 NIPSNAP1Q9BPW8 284 aa1.7□□□□□ -2.14
SOX2-OT-231ENST00000599082 REG4Q9BYZ8 158 aa1.7□□□□□ -2.14
SOX2-OT-231ENST00000599082 C11orf68Q9H3H3 251 aaKnown RBP1.7□□□□□ -2.14
SOX2-OT-231ENST00000599082 MTUS2Q5JR59 1369 aa1.7□□□□□ -2.14
SOX2-OT-231ENST00000599082 SHBGP04278 402 aa1.69□□□□□ -2.14
SOX2-OT-231ENST00000599082 BPIFA4PQ86YQ2 179 aa1.69□□□□□ -2.14
SOX2-OT-231ENST00000599082 MRPL27Q9P0M9 148 aaKnown RBP1.69□□□□□ -2.14
SOX2-OT-231ENST00000599082 VPS29Q9UBQ0 182 aa1.69□□□□□ -2.14
SOX2-OT-231ENST00000599082 CKLFQ9UBR5 152 aa1.69□□□□□ -2.14
SOX2-OT-231ENST00000599082 EXPH5Q8NEV8 1989 aa1.68□□□□□ -2.14
SOX2-OT-231ENST00000599082 ROS1P08922 2347 aa1.68□□□□□ -2.14
SOX2-OT-231ENST00000599082 TOPBP1Q92547 1522 aa1.68□□□□□ -2.14
SOX2-OT-231ENST00000599082 SMIM23A6NLE4 172 aa1.68□□□□□ -2.14
SOX2-OT-231ENST00000599082 HCRTO43612 131 aa1.68□□□□□ -2.14
SOX2-OT-231ENST00000599082 RNASE3P12724 160 aaKnown RBP1.68□□□□□ -2.14
SOX2-OT-231ENST00000599082 IL9P15248 144 aa1.68□□□□□ -2.14
SOX2-OT-231ENST00000599082 RPS20P60866 119 aaKnown RBP1.68□□□□□ -2.14
SOX2-OT-231ENST00000599082 ANKRD29Q8N6D5 301 aa1.68□□□□□ -2.14
SOX2-OT-231ENST00000599082 COMMD5Q9GZQ3 224 aa1.68□□□□□ -2.14
SOX2-OT-231ENST00000599082 HECW2Q9P2P5 1572 aa1.68□□□□□ -2.14
SOX2-OT-231ENST00000599082 DPRXA6NFQ7 191 aa1.67□□□□□ -2.14
SOX2-OT-231ENST00000599082 SERPINA6P08185 405 aa1.67□□□□□ -2.14
SOX2-OT-231ENST00000599082 HTR1AP08908 422 aa1.67□□□□□ -2.14
SOX2-OT-231ENST00000599082 LPCAT3Q6P1A2 487 aa1.67□□□□□ -2.14
SOX2-OT-231ENST00000599082 ZNF826PQ6ZT77 177 aa1.67□□□□□ -2.14
SOX2-OT-231ENST00000599082 OR8J2Q8NGG1 315 aa1.67□□□□□ -2.14
SOX2-OT-231ENST00000599082 TERB2Q8NHR7 220 aa1.67□□□□□ -2.14
SOX2-OT-231ENST00000599082 H1FXQ92522 213 aaKnown RBP1.67□□□□□ -2.14
SOX2-OT-231ENST00000599082 TOMM6Q96B49 74 aa1.67□□□□□ -2.14
SOX2-OT-231ENST00000599082 TSPAN32Q96QS1 320 aa1.67□□□□□ -2.14
SOX2-OT-231ENST00000599082 SERPINI1Q99574 410 aa1.67□□□□□ -2.14
SOX2-OT-231ENST00000599082 NUP155O75694 1391 aa1.67□□□□□ -2.14
SOX2-OT-231ENST00000599082 CACNA1BQ00975 2339 aa1.67□□□□□ -2.14
SOX2-OT-231ENST00000599082 HECW1Q76N89 1606 aa1.66□□□□□ -2.14
SOX2-OT-231ENST00000599082 IGKV1D-42A0A075B6H8 117 aa1.66□□□□□ -2.14
SOX2-OT-231ENST00000599082 EXOC1LA0A1B0GW35 172 aa1.66□□□□□ -2.14
SOX2-OT-231ENST00000599082 CLDN24A6NM45 220 aa1.66□□□□□ -2.14
SOX2-OT-231ENST00000599082 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.66□□□□□ -2.14
SOX2-OT-231ENST00000599082 Q6ZQT0 140 aa1.66□□□□□ -2.14
SOX2-OT-231ENST00000599082 CLVS1Q8IUQ0 354 aaPredicted RBP1.66□□□□□ -2.14
SOX2-OT-231ENST00000599082 CLDN22Q8N7P3 220 aa1.66□□□□□ -2.14
SOX2-OT-231ENST00000599082 ZNF565Q8N9K5 539 aa1.66□□□□□ -2.14
SOX2-OT-231ENST00000599082 TMEM56-RWDD3S4R434 201 aa1.66□□□□□ -2.14
SOX2-OT-231ENST00000599082 COL4A5P29400 1685 aa1.66□□□□□ -2.14
SOX2-OT-231ENST00000599082 TRAV14DV4A0A0A6YYC5 116 aa1.65□□□□□ -2.15
SOX2-OT-231ENST00000599082 PQLC2LA1A4F0 135 aa1.65□□□□□ -2.15
SOX2-OT-231ENST00000599082 OR5F1O95221 314 aa1.65□□□□□ -2.15
SOX2-OT-231ENST00000599082 CTSDP07339 412 aaPredicted RBP1.65□□□□□ -2.15
SOX2-OT-231ENST00000599082 CRYGAP11844 174 aa1.65□□□□□ -2.15
SOX2-OT-231ENST00000599082 FKBP2P26885 142 aaKnown RBP1.65□□□□□ -2.15
SOX2-OT-231ENST00000599082 DEFA1P59665 94 aa1.65□□□□□ -2.15
SOX2-OT-231ENST00000599082 SPOPLQ6IQ16 392 aa1.65□□□□□ -2.15
SOX2-OT-231ENST00000599082 MIR17HGQ75NE6 70 aa1.65□□□□□ -2.15
SOX2-OT-231ENST00000599082 DEFB128Q7Z7B8 93 aa1.65□□□□□ -2.15
SOX2-OT-231ENST00000599082 DCUN1D1Q96GG9 259 aa1.65□□□□□ -2.15
SOX2-OT-231ENST00000599082 CCDC42Q96M95 316 aa1.65□□□□□ -2.15
SOX2-OT-231ENST00000599082 TRAV9-1A0A075B6T8 112 aa1.64□□□□□ -2.15
SOX2-OT-231ENST00000599082 OR4C46A6NHA9 309 aa1.64□□□□□ -2.15
SOX2-OT-231ENST00000599082 LYPLA2O95372 231 aa1.64□□□□□ -2.15
SOX2-OT-231ENST00000599082 PLCXD2Q0VAA5 305 aa1.64□□□□□ -2.15
SOX2-OT-231ENST00000599082 ITGB3BPQ13352 177 aaPredicted RBP1.64□□□□□ -2.15
SOX2-OT-231ENST00000599082 C12orf29Q8N999 325 aa1.64□□□□□ -2.15
SOX2-OT-231ENST00000599082 AQP3Q92482 292 aa1.64□□□□□ -2.15
SOX2-OT-231ENST00000599082 C8orf76Q96K31 380 aa1.64□□□□□ -2.15
SOX2-OT-231ENST00000599082 GINS4Q9BRT9 223 aa1.64□□□□□ -2.15
SOX2-OT-231ENST00000599082 ULBP3Q9BZM4 244 aa1.64□□□□□ -2.15
SOX2-OT-231ENST00000599082 OR5AC2Q9NZP5 309 aa1.64□□□□□ -2.15
SOX2-OT-231ENST00000599082 ZNF106Q9H2Y7 1883 aaKnown RBP1.64□□□□□ -2.15
SOX2-OT-231ENST00000599082 TRAV26-2A0A0B4J265 109 aa1.63□□□□□ -2.15
SOX2-OT-231ENST00000599082 FUOMA2VDF0 154 aa1.63□□□□□ -2.15
SOX2-OT-231ENST00000599082 BUB1B-PAK6H3BSN5 160 aa1.63□□□□□ -2.15
SOX2-OT-231ENST00000599082 IFNA10P01566 189 aa1.63□□□□□ -2.15
SOX2-OT-231ENST00000599082 TTRP02766 147 aa1.63□□□□□ -2.15
SOX2-OT-231ENST00000599082 TRAPPC5Q8IUR0 188 aa1.63□□□□□ -2.15
SOX2-OT-231ENST00000599082 OR4D11Q8NGI4 311 aa1.63□□□□□ -2.15
SOX2-OT-231ENST00000599082 DNAJC9Q8WXX5 260 aa1.63□□□□□ -2.15
SOX2-OT-231ENST00000599082 PLXND1Q9Y4D7 1925 aa1.63□□□□□ -2.15
SOX2-OT-231ENST00000599082 EML6Q6ZMW3 1958 aa1.63□□□□□ -2.15
SOX2-OT-231ENST00000599082 NCOA6Q14686 2063 aaPredicted RBP1.62□□□□□ -2.15
SOX2-OT-231ENST00000599082 KPNA3O00505 521 aaPredicted RBP1.62□□□□□ -2.15
SOX2-OT-231ENST00000599082 CRYZL1O95825 349 aa1.62□□□□□ -2.15
SOX2-OT-231ENST00000599082 RPS17P08708 135 aaKnown RBP1.62□□□□□ -2.15
SOX2-OT-231ENST00000599082 SPI1P17947 270 aa1.62□□□□□ -2.15
SOX2-OT-231ENST00000599082 OMPP47874 163 aa1.62□□□□□ -2.15
SOX2-OT-231ENST00000599082 CTAG1AP78358 180 aa1.62□□□□□ -2.15
SOX2-OT-231ENST00000599082 LINC00471Q8N535 108 aa1.62□□□□□ -2.15
SOX2-OT-231ENST00000599082 SLC50A1Q9BRV3 221 aa1.62□□□□□ -2.15
SOX2-OT-231ENST00000599082 TMEM147Q9BVK8 224 aa1.62□□□□□ -2.15
SOX2-OT-231ENST00000599082 TRABDQ9H4I3 376 aa1.62□□□□□ -2.15
SOX2-OT-231ENST00000599082 FAM236DA0A1B0GTK5 79 aa1.61□□□□□ -2.15
SOX2-OT-231ENST00000599082 FAM236CP0DP71 79 aa1.61□□□□□ -2.15
SOX2-OT-231ENST00000599082 DPPA3Q6W0C5 159 aa1.61□□□□□ -2.15
SOX2-OT-231ENST00000599082 OR5A1Q8NGJ0 315 aa1.61□□□□□ -2.15
SOX2-OT-231ENST00000599082 C20orf27Q9GZN8 174 aa1.61□□□□□ -2.15
SOX2-OT-231ENST00000599082 SLC39A9Q9NUM3 307 aa1.61□□□□□ -2.15
SOX2-OT-231ENST00000599082 PLB1Q6P1J6 1458 aa1.61□□□□□ -2.15
SOX2-OT-231ENST00000599082 ECM29Q5VYK3 1845 aa1.61□□□□□ -2.15
SOX2-OT-231ENST00000599082 RIC1Q4ADV7 1423 aa1.6□□□□□ -2.15
SOX2-OT-231ENST00000599082 A0A0D9SG52 128 aa1.6□□□□□ -2.15
SOX2-OT-231ENST00000599082 FADS1O60427 444 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms