RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 EDN2P20800 178 aa10.85□□□□□ -0.67
SHKBP1-217ENST00000598558 HOXA1P49639 335 aaPredicted RBP10.85□□□□□ -0.67
SHKBP1-217ENST00000598558 ERHP84090 104 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-217ENST00000598558 C4orf46Q504U0 113 aa10.85□□□□□ -0.67
SHKBP1-217ENST00000598558 ACSM6Q6P461 480 aa10.85□□□□□ -0.67
SHKBP1-217ENST00000598558 ADAMTSL5Q6ZMM2 481 aa10.85□□□□□ -0.67
SHKBP1-217ENST00000598558 VN1R17PQ8TDU5 208 aa10.85□□□□□ -0.67
SHKBP1-217ENST00000598558 RBKSQ9H477 322 aa10.85□□□□□ -0.67
SHKBP1-217ENST00000598558 HSPB7Q9UBY9 170 aa10.85□□□□□ -0.67
SHKBP1-217ENST00000598558 TRBV7-1A0A0A6YYK4 115 aa10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 DUXBA0A1W2PPF3 345 aa10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 DUS4LO95620 317 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 MT-CO2P00403 227 aa10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 H2AFB2P0C5Z0 115 aa10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 ZP3P21754 424 aa10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 GPR183P32249 361 aa10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 TNFRSF9Q07011 255 aa10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 EGFEM1PQ0D2K5 195 aa10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 NRARPQ7Z6K4 114 aa10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 HAPLN4Q86UW8 402 aa10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 MISP3Q96FF7 219 aa10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 CXorf58Q96LI9 332 aa10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 CHRDL1Q9BU40 450 aa10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 PDCD10Q9BUL8 212 aa10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 MCRIP2Q9BUT9 160 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 FNDC4Q9H6D8 234 aaPredicted RBP10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 MRPL36Q9P0J6 103 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-217ENST00000598558 IGHV3-35A0A0C4DH35 117 aa10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 CEBPZOSA8MTT3 80 aa10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 GGCTO75223 188 aaKnown RBP10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 CSN3P07498 182 aa10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 SPNP16150 400 aa10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 ADMP35318 185 aa10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 ARL3P36405 182 aa10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 RPEL1Q2QD12 228 aa10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 C9orf66Q5T8R8 295 aa10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 MZT2BQ6NZ67 158 aa10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 OR1L6Q8NGR2 347 aa10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 OR1S1Q8NH92 325 aa10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 MITD1Q8WV92 249 aa10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 HEYLQ9NQ87 328 aaPredicted RBP10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 C21orf62Q9NYP8 219 aa10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 THYN1Q9P016 225 aa10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 TMED3Q9Y3Q3 217 aa10.83□□□□□ -0.68
SHKBP1-217ENST00000598558 OR2T8A6NH00 312 aa10.82□□□□□ -0.68
SHKBP1-217ENST00000598558 SLC25A6P12236 298 aa10.82□□□□□ -0.68
SHKBP1-217ENST00000598558 SNCAP37840 140 aa10.82□□□□□ -0.68
SHKBP1-217ENST00000598558 UNQ9165/PRO28630Q6UXU0 137 aa10.82□□□□□ -0.68
SHKBP1-217ENST00000598558 DUSP18Q8NEJ0 188 aa10.82□□□□□ -0.68
SHKBP1-217ENST00000598558 OR9G4Q8NGQ1 327 aa10.82□□□□□ -0.68
SHKBP1-217ENST00000598558 PINX1Q96BK5 328 aaKnown RBP10.82□□□□□ -0.68
SHKBP1-217ENST00000598558 OR10C1Q96KK4 312 aa10.82□□□□□ -0.68
SHKBP1-217ENST00000598558 ENY2Q9NPA8 101 aa10.82□□□□□ -0.68
SHKBP1-217ENST00000598558 AURKAIP1Q9NWT8 199 aaPredicted RBP10.82□□□□□ -0.68
SHKBP1-217ENST00000598558 WI2-2373I1.2A0A1W2PRP0 233 aa10.81□□□□□ -0.68
SHKBP1-217ENST00000598558 TGOLN2O43493 480 aa10.81□□□□□ -0.68
SHKBP1-217ENST00000598558 SAP30O75446 220 aa10.81□□□□□ -0.68
SHKBP1-217ENST00000598558 CTSGP08311 255 aa10.81□□□□□ -0.68
SHKBP1-217ENST00000598558 GPHB5Q86YW7 130 aa10.81□□□□□ -0.68
SHKBP1-217ENST00000598558 COQ8AQ8NI60 647 aa10.81□□□□□ -0.68
SHKBP1-217ENST00000598558 DTD1Q8TEA8 209 aa10.81□□□□□ -0.68
SHKBP1-217ENST00000598558 ZNF431Q8TF32 576 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-217ENST00000598558 MAGT1Q9H0U3 335 aa10.81□□□□□ -0.68
SHKBP1-217ENST00000598558 CCSO14618 274 aa10.8□□□□□ -0.68
SHKBP1-217ENST00000598558 CYB5BO43169 146 aa10.8□□□□□ -0.68
SHKBP1-217ENST00000598558 IAPPP10997 89 aa10.8□□□□□ -0.68
SHKBP1-217ENST00000598558 C2orf83Q53S99 150 aa10.8□□□□□ -0.68
SHKBP1-217ENST00000598558 FAM209BQ5JX69 171 aa10.8□□□□□ -0.68
SHKBP1-217ENST00000598558 UBAC2Q8NBM4 344 aa10.8□□□□□ -0.68
SHKBP1-217ENST00000598558 OR4D5Q8NGN0 318 aa10.8□□□□□ -0.68
SHKBP1-217ENST00000598558 SELENOKQ9Y6D0 94 aa10.8□□□□□ -0.68
SHKBP1-217ENST00000598558 K7EIL1 84 aa10.79□□□□□ -0.68
SHKBP1-217ENST00000598558 IL5P05113 134 aa10.79□□□□□ -0.68
SHKBP1-217ENST00000598558 FCGR2BP31994 310 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-217ENST00000598558 HTR2BP41595 481 aa10.79□□□□□ -0.68
SHKBP1-217ENST00000598558 MFAP4P55083 255 aa10.79□□□□□ -0.68
SHKBP1-217ENST00000598558 ID3Q02535 119 aa10.79□□□□□ -0.68
SHKBP1-217ENST00000598558 Q56UQ5 140 aa10.79□□□□□ -0.68
SHKBP1-217ENST00000598558 PLET1Q6UQ28 207 aa10.79□□□□□ -0.68
SHKBP1-217ENST00000598558 SLC24A4Q8NFF2 622 aa10.79□□□□□ -0.68
SHKBP1-217ENST00000598558 ENKURQ8TC29 256 aa10.79□□□□□ -0.68
SHKBP1-217ENST00000598558 ZNF436Q9C0F3 470 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-217ENST00000598558 IGHV3OR16-8A0A075B7F1 116 aa10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 TMEM213A2RRL7 107 aa10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 IZUMO1RA6ND01 250 aa10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 C15orf62A8K5M9 175 aa10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 LGALS9O00182 355 aa10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 TMEM50AO95807 157 aa10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 IGLV1-51P01701 117 aa10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 NPY1RP25929 384 aa10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 INSL3P51460 131 aa10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 SUB1P53999 127 aaKnown RBP eCLIP10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 POLR2GP62487 172 aaKnown RBP eCLIP10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 TATDN3Q17R31 274 aa10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 TM4SF20Q53R12 229 aa10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 REC114Q7Z4M0 266 aa10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 C12orf45Q8N5I9 185 aaPredicted RBP10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 UXS1Q8NBZ7 420 aa10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 CACNG8Q8WXS5 425 aa10.78□□□□□ -0.68
SHKBP1-217ENST00000598558 BSCL2Q96G97 398 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms