RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 VAMP8Q9BV40 100 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 JPT1Q9UK76 154 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 SLC45A2Q9UMX9 530 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 PPIAL4AQ9Y536 164 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 KBTBD11-OT1A0A1B0GTJ5 212 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 ZNF891A8MT65 544 aaPredicted RBP10.2□□□□□ -0.78
USHBP1-207ENST00000597928 SRRM5B3KS81 715 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 TCAPO15273 167 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 HSBP1O75506 76 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 TAS2R45P59539 299 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 RELBQ01201 579 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 BSPH1Q075Z2 132 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 C1orf229Q6ZS94 237 aaPredicted RBP10.2□□□□□ -0.78
USHBP1-207ENST00000597928 Q8TCH9 128 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 AGMATQ9BSE5 352 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 IGKV3-15P01624 115 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 IGHV1-46P01743 117 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 TNFRSF1AP19438 455 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 USF1P22415 310 aaPredicted RBP10.2□□□□□ -0.78
USHBP1-207ENST00000597928 TPPP2P59282 170 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 PRR30Q53SZ7 412 aaPredicted RBP10.2□□□□□ -0.78
USHBP1-207ENST00000597928 C22orf15Q8WYQ4 148 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 IFI27L2Q9H2X8 130 aa10.2□□□□□ -0.78
USHBP1-207ENST00000597928 TRAV1-1A0A0B4J248 108 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 C16orf97H3BN30 126 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 CD40P25942 277 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 TFPI2P48307 235 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 Q56UQ5 140 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 LRRC10Q5BKY1 277 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 LYPD2Q6UXB3 125 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 ST6GALNAC6Q969X2 333 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 ABHD17AQ96GS6 310 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 IDI2-AS1Q9NZ38 188 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 NAGKQ9UJ70 344 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 TRBV24-1A0A075B6N3 115 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 TRBV6-6A0A0A6YYG2 114 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 C19orf67A6NJJ6 358 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 SRRM4A7MD48 611 aaKnown RBP10.19□□□□□ -0.78
USHBP1-207ENST00000597928 MCRIP2Q9BUT9 160 aaKnown RBP10.19□□□□□ -0.78
USHBP1-207ENST00000597928 SPRY4Q9C004 299 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 LPAR2Q9HBW0 351 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 A0A1B0GW64 132 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 TNFSF13O75888 250 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 IGHV3-23P01764 117 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 FAM87AP0C7U9 286 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 HOXB1P14653 301 aaPredicted RBP10.19□□□□□ -0.78
USHBP1-207ENST00000597928 GLRXP35754 106 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 RPL8P62917 257 aaKnown RBP10.19□□□□□ -0.78
USHBP1-207ENST00000597928 CENPEQ02224 2701 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 IBA57Q5T440 356 aaKnown RBP10.19□□□□□ -0.78
USHBP1-207ENST00000597928 SLC25A15Q9Y619 301 aa10.19□□□□□ -0.78
USHBP1-207ENST00000597928 PPIAL4EA0A075B759 164 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 SERTM2A0A1B0GWG4 89 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 PGPA6NDG6 321 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 PPIAL4DF5H284 164 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 ZNF883P0CG24 379 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 PPIAL4FP0DN26 164 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 PMCHL1Q16048 86 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 C1orf185Q5T7R7 199 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 PRDM13Q9H4Q3 707 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 ZNF586Q9NXT0 402 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 TLN2Q9Y4G6 2542 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 TRBV20OR9-2A0A075B6H5 130 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 NCBP2LA6PVI3 153 aaKnown RBP10.18□□□□□ -0.78
USHBP1-207ENST00000597928 M0QZ24 198 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 GATCO43716 136 aaKnown RBP10.18□□□□□ -0.78
USHBP1-207ENST00000597928 RAB4AP20338 218 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 ZNF714Q96N38 554 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 KCNIP2Q9NS61 270 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 IL19Q9UHD0 177 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 ARL2-SNX15V9GYD0 113 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 IGHV3OR16-13A0A075B7E8 117 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 IGHV3-74A0A0B4J1X5 117 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 SSBP2P81877 361 aaPredicted RBP10.18□□□□□ -0.78
USHBP1-207ENST00000597928 SRSF7Q16629 238 aaKnown RBP eCLIP10.18□□□□□ -0.78
USHBP1-207ENST00000597928 TDRG1Q3Y452 100 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 C10orf113Q5VZT2 155 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 RAB9BQ9NP90 201 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 ASCL3Q9NQ33 180 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 PRNDQ9UKY0 176 aa10.18□□□□□ -0.78
USHBP1-207ENST00000597928 C15orf65H3BRN8 121 aa10.17□□□□□ -0.78
USHBP1-207ENST00000597928 TEX38Q6PEX7 206 aa10.17□□□□□ -0.78
USHBP1-207ENST00000597928 PAXXQ9BUH6 204 aa10.17□□□□□ -0.78
USHBP1-207ENST00000597928 KDF1Q8NAX2 398 aaPredicted RBP10.17□□□□□ -0.78
USHBP1-207ENST00000597928 OR1L4Q8NGR5 311 aa10.17□□□□□ -0.78
USHBP1-207ENST00000597928 PMCHL2Q9BQD1 86 aa10.17□□□□□ -0.78
USHBP1-207ENST00000597928 TIMM9Q9Y5J7 89 aa10.17□□□□□ -0.78
USHBP1-207ENST00000597928 C15orf61A6NNL5 157 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 EREGO14944 169 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 OR1L8Q8NGR8 309 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 FAM222BQ8WU58 562 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 TMEM170AQ8WVE7 144 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 TPSG1Q9NRR2 321 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 INSIG2Q9Y5U4 225 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 SMG1Q96Q15 3661 aaKnown RBP10.16□□□□□ -0.78
USHBP1-207ENST00000597928 DIRC3C9JPN6 131 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 ARF6P62330 175 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 LCN12Q6JVE5 192 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 CORO2AQ92828 525 aa10.16□□□□□ -0.78
USHBP1-207ENST00000597928 GAL3ST2Q9H3Q3 398 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms