RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 VN1R17PQ8TDU5 208 aa11.1□□□□□ -0.63
VRK3-213ENST00000597215 MISP3Q96FF7 219 aa11.1□□□□□ -0.63
VRK3-213ENST00000597215 DUX3Q96PT4 197 aa11.1□□□□□ -0.63
VRK3-213ENST00000597215 CIB3Q96Q77 187 aaPredicted RBP11.1□□□□□ -0.63
VRK3-213ENST00000597215 GSKIPQ9P0R6 139 aa11.1□□□□□ -0.63
VRK3-213ENST00000597215 TRRAPQ9Y4A5 3859 aa11.1□□□□□ -0.63
VRK3-213ENST00000597215 TRBV7-1A0A0A6YYK4 115 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 C7orf66A4D0T2 115 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 ANKRD34BA5PLL1 514 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 MFSD2BA6NFX1 497 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 LINC01619G3V211 115 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 WRBO00258 174 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 SSNA1O43805 119 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 LY86O95711 162 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 OR8U8P0C7N1 319 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 NPY1RP25929 384 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 ID3Q02535 119 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 FHL3Q13643 280 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 OXA1LQ15070 435 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 C2orf83Q53S99 150 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 C2orf50Q96LR7 162 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 MAGT1Q9H0U3 335 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 RANGRFQ9HD47 186 aaPredicted RBP11.09□□□□□ -0.63
VRK3-213ENST00000597215 PEF1Q9UBV8 284 aaKnown RBP11.09□□□□□ -0.63
VRK3-213ENST00000597215 ALG5Q9Y673 324 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 U3KQ87 197 aa11.09□□□□□ -0.63
VRK3-213ENST00000597215 IGHV4OR15-8A0A075B7B6 117 aa11.08□□□□□ -0.64
VRK3-213ENST00000597215 A0A087WW49 117 aa11.08□□□□□ -0.64
VRK3-213ENST00000597215 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.08□□□□□ -0.64
VRK3-213ENST00000597215 K7EIM0 57 aa11.08□□□□□ -0.64
VRK3-213ENST00000597215 GOSR2O14653 212 aa11.08□□□□□ -0.64
VRK3-213ENST00000597215 SCGB1D2O95969 90 aa11.08□□□□□ -0.64
VRK3-213ENST00000597215 IFNA10P01566 189 aa11.08□□□□□ -0.64
VRK3-213ENST00000597215 IAPPP10997 89 aa11.08□□□□□ -0.64
VRK3-213ENST00000597215 ATP5IP56385 69 aaPredicted RBP11.08□□□□□ -0.64
VRK3-213ENST00000597215 PVRIGQ6DKI7 326 aa11.08□□□□□ -0.64
VRK3-213ENST00000597215 C11orf87Q6NUJ2 197 aa11.08□□□□□ -0.64
VRK3-213ENST00000597215 TREML4Q6UXN2 200 aa11.08□□□□□ -0.64
VRK3-213ENST00000597215 PINX1Q96BK5 328 aaKnown RBP11.08□□□□□ -0.64
VRK3-213ENST00000597215 CCDC140Q96MF4 163 aa11.08□□□□□ -0.64
VRK3-213ENST00000597215 S4R3C0 116 aa11.08□□□□□ -0.64
VRK3-213ENST00000597215 I3L2K1 104 aa11.07□□□□□ -0.64
VRK3-213ENST00000597215 MT-CO2P00403 227 aa11.07□□□□□ -0.64
VRK3-213ENST00000597215 IGHV3-23P01764 117 aa11.07□□□□□ -0.64
VRK3-213ENST00000597215 ZP3P21754 424 aa11.07□□□□□ -0.64
VRK3-213ENST00000597215 POLR2GP62487 172 aaKnown RBP eCLIP11.07□□□□□ -0.64
VRK3-213ENST00000597215 LINC00482Q8N8I6 264 aa11.07□□□□□ -0.64
VRK3-213ENST00000597215 ZNF502Q8TBZ5 544 aa11.07□□□□□ -0.64
VRK3-213ENST00000597215 RNASEH2CQ8TDP1 164 aaKnown RBP11.07□□□□□ -0.64
VRK3-213ENST00000597215 SCARB1Q8WTV0 552 aa11.07□□□□□ -0.64
VRK3-213ENST00000597215 ATP6V0BQ99437 205 aa11.07□□□□□ -0.64
VRK3-213ENST00000597215 C21orf62Q9NYP8 219 aa11.07□□□□□ -0.64
VRK3-213ENST00000597215 IGHV3-21A0A0B4J1V1 117 aa11.06□□□□□ -0.64
VRK3-213ENST00000597215 RPS10-NUDT3A0A1W2PQS6 291 aa11.06□□□□□ -0.64
VRK3-213ENST00000597215 SSSCA1O60232 199 aa11.06□□□□□ -0.64
VRK3-213ENST00000597215 TRBV12-3P01733 135 aa11.06□□□□□ -0.64
VRK3-213ENST00000597215 MBPP02686 304 aaPredicted RBP11.06□□□□□ -0.64
VRK3-213ENST00000597215 CD33P20138 364 aa11.06□□□□□ -0.64
VRK3-213ENST00000597215 OPRK1P41145 380 aa11.06□□□□□ -0.64
VRK3-213ENST00000597215 RPP30P78346 268 aaKnown RBP11.06□□□□□ -0.64
VRK3-213ENST00000597215 CLEC19AQ6UXS0 136 aa11.06□□□□□ -0.64
VRK3-213ENST00000597215 VWFP04275 2813 aa11.06□□□□□ -0.64
VRK3-213ENST00000597215 BMPR1BO00238 502 aa11.05□□□□□ -0.64
VRK3-213ENST00000597215 HOXD3P31249 432 aaPredicted RBP11.05□□□□□ -0.64
VRK3-213ENST00000597215 GPR183P32249 361 aa11.05□□□□□ -0.64
VRK3-213ENST00000597215 ARL3P36405 182 aa11.05□□□□□ -0.64
VRK3-213ENST00000597215 SLURP1P55000 103 aa11.05□□□□□ -0.64
VRK3-213ENST00000597215 MFAP4P55083 255 aa11.05□□□□□ -0.64
VRK3-213ENST00000597215 RAB11AP62491 216 aa11.05□□□□□ -0.64
VRK3-213ENST00000597215 RPEL1Q2QD12 228 aa11.05□□□□□ -0.64
VRK3-213ENST00000597215 TMEM170AQ8WVE7 144 aa11.05□□□□□ -0.64
VRK3-213ENST00000597215 RAB40CQ96S21 281 aa11.05□□□□□ -0.64
VRK3-213ENST00000597215 TXN2Q99757 166 aa11.05□□□□□ -0.64
VRK3-213ENST00000597215 GAR1Q9NY12 217 aaKnown RBP11.05□□□□□ -0.64
VRK3-213ENST00000597215 MGAT4CQ9UBM8 478 aa11.05□□□□□ -0.64
VRK3-213ENST00000597215 C15orf62A8K5M9 175 aa11.04□□□□□ -0.64
VRK3-213ENST00000597215 PPP5D1E7EU14 171 aa11.04□□□□□ -0.64
VRK3-213ENST00000597215 K7EPK0 472 aa11.04□□□□□ -0.64
VRK3-213ENST00000597215 GGCTO75223 188 aaKnown RBP11.04□□□□□ -0.64
VRK3-213ENST00000597215 SIX6O95475 246 aa11.04□□□□□ -0.64
VRK3-213ENST00000597215 IFNA4P05014 189 aa11.04□□□□□ -0.64
VRK3-213ENST00000597215 CLEC3BP05452 202 aa11.04□□□□□ -0.64
VRK3-213ENST00000597215 FCGR2BP31994 310 aaPredicted RBP11.04□□□□□ -0.64
VRK3-213ENST00000597215 CYCSP99999 105 aaKnown RBP11.04□□□□□ -0.64
VRK3-213ENST00000597215 Q56UQ5 140 aa11.04□□□□□ -0.64
VRK3-213ENST00000597215 SPANXN5Q5MJ07 72 aa11.04□□□□□ -0.64
VRK3-213ENST00000597215 ETFRF1Q6IPR1 90 aa11.04□□□□□ -0.64
VRK3-213ENST00000597215 ACSM6Q6P461 480 aa11.04□□□□□ -0.64
VRK3-213ENST00000597215 UBAC2Q8NBM4 344 aa11.04□□□□□ -0.64
VRK3-213ENST00000597215 WFDC9Q8NEX5 89 aa11.04□□□□□ -0.64
VRK3-213ENST00000597215 BSCL2Q96G97 398 aaPredicted RBP11.04□□□□□ -0.64
VRK3-213ENST00000597215 SMIM8Q96KF7 97 aa11.04□□□□□ -0.64
VRK3-213ENST00000597215 NMES1Q9C002 83 aa11.04□□□□□ -0.64
VRK3-213ENST00000597215 PAIP2BQ9ULR5 123 aaKnown RBP11.04□□□□□ -0.64
VRK3-213ENST00000597215 RCL1Q9Y2P8 373 aaKnown RBP11.04□□□□□ -0.64
VRK3-213ENST00000597215 STRAPQ9Y3F4 350 aaKnown RBP11.04□□□□□ -0.64
VRK3-213ENST00000597215 LSM5Q9Y4Y9 91 aaKnown RBP11.04□□□□□ -0.64
VRK3-213ENST00000597215 OR2T8A6NH00 312 aa11.03□□□□□ -0.64
VRK3-213ENST00000597215 H3BP45 60 aa11.03□□□□□ -0.64
VRK3-213ENST00000597215 L7N2F9 121 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms