RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 STPG3Q8N7X2 389 aa12.6□□□□□ -0.39
CCDC9-202ENST00000595659 OR4D10Q8NGI6 311 aa12.6□□□□□ -0.39
CCDC9-202ENST00000595659 TP53RKQ96S44 253 aa12.6□□□□□ -0.39
CCDC9-202ENST00000595659 NXF2Q9GZY0 626 aaKnown RBP12.6□□□□□ -0.39
CCDC9-202ENST00000595659 EXTL2Q9UBQ6 330 aa12.6□□□□□ -0.39
CCDC9-202ENST00000595659 BIRC6Q9NR09 4857 aa12.6□□□□□ -0.39
CCDC9-202ENST00000595659 ALMS1Q8TCU4 4167 aa12.59□□□□□ -0.39
CCDC9-202ENST00000595659 TRAV14DV4A0A0A6YYC5 116 aa12.59□□□□□ -0.39
CCDC9-202ENST00000595659 A0A0B4J293 547 aa12.59□□□□□ -0.39
CCDC9-202ENST00000595659 IGHV3-66A0A0C4DH42 116 aa12.59□□□□□ -0.39
CCDC9-202ENST00000595659 GNG7O60262 68 aa12.59□□□□□ -0.39
CCDC9-202ENST00000595659 BMI1P35226 326 aa12.59□□□□□ -0.39
CCDC9-202ENST00000595659 PPP5CP53041 499 aa12.59□□□□□ -0.39
CCDC9-202ENST00000595659 LHFPL1Q86WI0 220 aa12.59□□□□□ -0.39
CCDC9-202ENST00000595659 WFDC3Q8IUB2 231 aa12.59□□□□□ -0.39
CCDC9-202ENST00000595659 ZNF114Q8NC26 417 aa12.59□□□□□ -0.39
CCDC9-202ENST00000595659 ABHD1Q96SE0 405 aa12.59□□□□□ -0.39
CCDC9-202ENST00000595659 TXN2Q99757 166 aa12.59□□□□□ -0.39
CCDC9-202ENST00000595659 UBE2CO00762 179 aa12.58□□□□□ -0.4
CCDC9-202ENST00000595659 ST8SIA3O43173 380 aa12.58□□□□□ -0.4
CCDC9-202ENST00000595659 IFNA17P01571 189 aa12.58□□□□□ -0.4
CCDC9-202ENST00000595659 APOHP02749 345 aaPredicted RBP12.58□□□□□ -0.4
CCDC9-202ENST00000595659 FCGR2BP31994 310 aaPredicted RBP12.58□□□□□ -0.4
CCDC9-202ENST00000595659 AKR1C2P52895 323 aa12.58□□□□□ -0.4
CCDC9-202ENST00000595659 RND3P61587 244 aa12.58□□□□□ -0.4
CCDC9-202ENST00000595659 CTF1Q16619 201 aa12.58□□□□□ -0.4
CCDC9-202ENST00000595659 GPR107Q5VW38 600 aa12.58□□□□□ -0.4
CCDC9-202ENST00000595659 TOMM20LQ6UXN7 152 aa12.58□□□□□ -0.4
CCDC9-202ENST00000595659 OR10C1Q96KK4 312 aa12.58□□□□□ -0.4
CCDC9-202ENST00000595659 TP53TG1Q9Y2A0 90 aa12.58□□□□□ -0.4
CCDC9-202ENST00000595659 C3orf85A0A1B0GTC6 90 aa12.57□□□□□ -0.4
CCDC9-202ENST00000595659 SMIM18P0DKX4 95 aa12.57□□□□□ -0.4
CCDC9-202ENST00000595659 ZNF182P17025 639 aaPredicted RBP12.57□□□□□ -0.4
CCDC9-202ENST00000595659 SNCAP37840 140 aa12.57□□□□□ -0.4
CCDC9-202ENST00000595659 ETV6P41212 452 aa12.57□□□□□ -0.4
CCDC9-202ENST00000595659 TRIM16LQ309B1 348 aa12.57□□□□□ -0.4
CCDC9-202ENST00000595659 SCGB2B2Q4G0G5 96 aa12.57□□□□□ -0.4
CCDC9-202ENST00000595659 TCF24Q7RTU0 167 aa12.57□□□□□ -0.4
CCDC9-202ENST00000595659 LILRB2Q8N423 598 aa12.57□□□□□ -0.4
CCDC9-202ENST00000595659 SLC35G3Q8N808 338 aa12.57□□□□□ -0.4
CCDC9-202ENST00000595659 ST8SIA2Q92186 375 aa12.57□□□□□ -0.4
CCDC9-202ENST00000595659 AP3S1Q92572 193 aa12.57□□□□□ -0.4
CCDC9-202ENST00000595659 RNF183Q96D59 192 aa12.57□□□□□ -0.4
CCDC9-202ENST00000595659 GALNT14Q96FL9 552 aa12.57□□□□□ -0.4
CCDC9-202ENST00000595659 MAP6D1Q9H9H5 199 aa12.57□□□□□ -0.4
CCDC9-202ENST00000595659 MTFP1Q9UDX5 166 aa12.57□□□□□ -0.4
CCDC9-202ENST00000595659 KIR2DL5BA0A0G2JN68 375 aa12.56□□□□□ -0.4
CCDC9-202ENST00000595659 KIR2DL5BA0A0G2JPC4 375 aa12.56□□□□□ -0.4
CCDC9-202ENST00000595659 GABARAPO95166 117 aa12.56□□□□□ -0.4
CCDC9-202ENST00000595659 P0C879 139 aa12.56□□□□□ -0.4
CCDC9-202ENST00000595659 TNFRSF9Q07011 255 aa12.56□□□□□ -0.4
CCDC9-202ENST00000595659 FAM90A2PQ658T7 463 aa12.56□□□□□ -0.4
CCDC9-202ENST00000595659 KIR2DL5AQ8N109 375 aa12.56□□□□□ -0.4
CCDC9-202ENST00000595659 DUSP18Q8NEJ0 188 aa12.56□□□□□ -0.4
CCDC9-202ENST00000595659 OR13C8Q8NGS7 320 aa12.56□□□□□ -0.4
CCDC9-202ENST00000595659 KIR2DL5BQ8NHK3 375 aa12.56□□□□□ -0.4
CCDC9-202ENST00000595659 ZNF486Q96H40 463 aaPredicted RBP12.56□□□□□ -0.4
CCDC9-202ENST00000595659 COPZ2Q9P299 210 aa12.56□□□□□ -0.4
CCDC9-202ENST00000595659 PUS1Q9Y606 427 aaKnown RBP eCLIP12.56□□□□□ -0.4
CCDC9-202ENST00000595659 A0A0G2JRQ6 117 aa12.55□□□□□ -0.4
CCDC9-202ENST00000595659 LY6G6CO95867 125 aa12.55□□□□□ -0.4
CCDC9-202ENST00000595659 NPBWR1P48145 328 aa12.55□□□□□ -0.4
CCDC9-202ENST00000595659 HOXA1P49639 335 aaPredicted RBP12.55□□□□□ -0.4
CCDC9-202ENST00000595659 MLANAQ16655 118 aa12.55□□□□□ -0.4
CCDC9-202ENST00000595659 FAAP20Q6NZ36 180 aa12.55□□□□□ -0.4
CCDC9-202ENST00000595659 ARRDC1Q8N5I2 433 aa12.55□□□□□ -0.4
CCDC9-202ENST00000595659 RNASE11Q8TAA1 199 aaKnown RBP12.55□□□□□ -0.4
CCDC9-202ENST00000595659 MARCH1Q8TCQ1 289 aa12.55□□□□□ -0.4
CCDC9-202ENST00000595659 LINC00476Q8WZB0 136 aa12.55□□□□□ -0.4
CCDC9-202ENST00000595659 MIXL1Q9H2W2 232 aa12.55□□□□□ -0.4
CCDC9-202ENST00000595659 MRPL36Q9P0J6 103 aaKnown RBP12.55□□□□□ -0.4
CCDC9-202ENST00000595659 A0A1B0GU03 582 aa12.54□□□□□ -0.4
CCDC9-202ENST00000595659 DFFBO76075 338 aa12.54□□□□□ -0.4
CCDC9-202ENST00000595659 RAB3DO95716 219 aa12.54□□□□□ -0.4
CCDC9-202ENST00000595659 TMEM50AO95807 157 aa12.54□□□□□ -0.4
CCDC9-202ENST00000595659 RNASE2P10153 161 aaKnown RBP12.54□□□□□ -0.4
CCDC9-202ENST00000595659 RPL11P62913 178 aaKnown RBP12.54□□□□□ -0.4
CCDC9-202ENST00000595659 CEMP1Q6PRD7 247 aaPredicted RBP12.54□□□□□ -0.4
CCDC9-202ENST00000595659 TMEM229BQ8NBD8 167 aa12.54□□□□□ -0.4
CCDC9-202ENST00000595659 TERB2Q8NHR7 220 aa12.54□□□□□ -0.4
CCDC9-202ENST00000595659 ZFAND1Q8TCF1 268 aa12.54□□□□□ -0.4
CCDC9-202ENST00000595659 GINS3Q9BRX5 216 aa12.54□□□□□ -0.4
CCDC9-202ENST00000595659 PDCD10Q9BUL8 212 aa12.54□□□□□ -0.4
CCDC9-202ENST00000595659 C6orf62Q9GZU0 229 aaPredicted RBP12.54□□□□□ -0.4
CCDC9-202ENST00000595659 CSTL1Q9H114 145 aa12.54□□□□□ -0.4
CCDC9-202ENST00000595659 MPTX1A8MV57 137 aa12.53□□□□□ -0.4
CCDC9-202ENST00000595659 RGS5O15539 181 aa12.53□□□□□ -0.4
CCDC9-202ENST00000595659 PAFAH1B2P68402 229 aa12.53□□□□□ -0.4
CCDC9-202ENST00000595659 LEMD1Q68G75 181 aa12.53□□□□□ -0.4
CCDC9-202ENST00000595659 STEAP1BQ6NZ63 245 aa12.53□□□□□ -0.4
CCDC9-202ENST00000595659 ZNF600Q6ZNG1 722 aa12.53□□□□□ -0.4
CCDC9-202ENST00000595659 Q6ZRM9 215 aa12.53□□□□□ -0.4
CCDC9-202ENST00000595659 CCDC71LQ8N9Z2 235 aa12.53□□□□□ -0.4
CCDC9-202ENST00000595659 RRNAD1Q96FB5 475 aaKnown RBP12.53□□□□□ -0.4
CCDC9-202ENST00000595659 MS4A6AQ9H2W1 248 aa12.53□□□□□ -0.4
CCDC9-202ENST00000595659 ZFAND3Q9H8U3 227 aa12.53□□□□□ -0.4
CCDC9-202ENST00000595659 NUPR2A6NF83 97 aa12.52□□□□□ -0.41
CCDC9-202ENST00000595659 DNASE2O00115 360 aaPredicted RBP12.52□□□□□ -0.41
CCDC9-202ENST00000595659 CTDSP2O14595 271 aa12.52□□□□□ -0.41
CCDC9-202ENST00000595659 ATG12O94817 140 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms