RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 CITED4Q96RK1 184 aa12.02□□□□□ -0.49
IRF3-210ENST00000595240 NXF2Q9GZY0 626 aaKnown RBP12.02□□□□□ -0.49
IRF3-210ENST00000595240 C5orf66Q9H5L9 145 aa12.02□□□□□ -0.49
IRF3-210ENST00000595240 C14orf166Q9Y224 244 aaKnown RBP12.02□□□□□ -0.49
IRF3-210ENST00000595240 CEPT1Q9Y6K0 416 aa12.02□□□□□ -0.49
IRF3-210ENST00000595240 A0A0G2JRQ6 117 aa12.01□□□□□ -0.49
IRF3-210ENST00000595240 ANKRD20A5PA0PJZ0 165 aa12.01□□□□□ -0.49
IRF3-210ENST00000595240 RBMY1BA6NDE4 496 aaKnown RBP12.01□□□□□ -0.49
IRF3-210ENST00000595240 RBMY1EA6NEQ0 496 aaKnown RBP12.01□□□□□ -0.49
IRF3-210ENST00000595240 SCAF4O95104 1147 aaKnown RBP12.01□□□□□ -0.49
IRF3-210ENST00000595240 CDS2O95674 445 aa12.01□□□□□ -0.49
IRF3-210ENST00000595240 MT-CO2P00403 227 aa12.01□□□□□ -0.49
IRF3-210ENST00000595240 OR5AC1P0C628 307 aa12.01□□□□□ -0.49
IRF3-210ENST00000595240 RBMY1DP0C7P1 496 aaKnown RBP12.01□□□□□ -0.49
IRF3-210ENST00000595240 TNFSF8P32971 234 aa12.01□□□□□ -0.49
IRF3-210ENST00000595240 MFAP4P55083 255 aa12.01□□□□□ -0.49
IRF3-210ENST00000595240 SPINK9Q5DT21 86 aa12.01□□□□□ -0.49
IRF3-210ENST00000595240 MCFD2Q8NI22 146 aa12.01□□□□□ -0.49
IRF3-210ENST00000595240 TXN2Q99757 166 aa12.01□□□□□ -0.49
IRF3-210ENST00000595240 PRRT1Q99946 306 aa12.01□□□□□ -0.49
IRF3-210ENST00000595240 TMEM222Q9H0R3 208 aa12.01□□□□□ -0.49
IRF3-210ENST00000595240 NAA60Q9H7X0 242 aa12.01□□□□□ -0.49
IRF3-210ENST00000595240 SRD5A3Q9H8P0 318 aa12.01□□□□□ -0.49
IRF3-210ENST00000595240 K7EMT4 169 aa12□□□□□ -0.49
IRF3-210ENST00000595240 NUPL2O15504 423 aaKnown RBP12□□□□□ -0.49
IRF3-210ENST00000595240 IFNA17P01571 189 aa12□□□□□ -0.49
IRF3-210ENST00000595240 ANKRD55Q3KP44 614 aa12□□□□□ -0.49
IRF3-210ENST00000595240 AARDQ4LEZ3 155 aa12□□□□□ -0.49
IRF3-210ENST00000595240 PVRIGQ6DKI7 326 aa12□□□□□ -0.49
IRF3-210ENST00000595240 RBPMS2Q6ZRY4 209 aaKnown RBP12□□□□□ -0.49
IRF3-210ENST00000595240 SLC35G3Q8N808 338 aa12□□□□□ -0.49
IRF3-210ENST00000595240 OR51S1Q8NGJ8 323 aa12□□□□□ -0.49
IRF3-210ENST00000595240 OR52B4Q8NGK2 314 aa12□□□□□ -0.49
IRF3-210ENST00000595240 GLYATL2Q8WU03 294 aa12□□□□□ -0.49
IRF3-210ENST00000595240 RRNAD1Q96FB5 475 aaKnown RBP12□□□□□ -0.49
IRF3-210ENST00000595240 C20orf24Q9BUV8 137 aa12□□□□□ -0.49
IRF3-210ENST00000595240 EDA2RQ9HAV5 297 aa12□□□□□ -0.49
IRF3-210ENST00000595240 GPR132Q9UNW8 380 aa12□□□□□ -0.49
IRF3-210ENST00000595240 IGHV3OR16-8A0A075B7F1 116 aa11.99□□□□□ -0.49
IRF3-210ENST00000595240 TEX13DA0A0J9YY54 714 aaPredicted RBP11.99□□□□□ -0.49
IRF3-210ENST00000595240 FABP12A6NFH5 140 aa11.99□□□□□ -0.49
IRF3-210ENST00000595240 CRYM-AS1A6NIL9 109 aa11.99□□□□□ -0.49
IRF3-210ENST00000595240 C15orf62A8K5M9 175 aa11.99□□□□□ -0.49
IRF3-210ENST00000595240 IGHV3-48P01763 117 aa11.99□□□□□ -0.49
IRF3-210ENST00000595240 SNCAP37840 140 aa11.99□□□□□ -0.49
IRF3-210ENST00000595240 RELQ04864 619 aaPredicted RBP11.99□□□□□ -0.49
IRF3-210ENST00000595240 Q6ZRM9 215 aa11.99□□□□□ -0.49
IRF3-210ENST00000595240 FAM219AQ8IW50 185 aa11.99□□□□□ -0.49
IRF3-210ENST00000595240 LHFPL5Q8TAF8 219 aa11.99□□□□□ -0.49
IRF3-210ENST00000595240 PDCD10Q9BUL8 212 aa11.99□□□□□ -0.49
IRF3-210ENST00000595240 HIPK2Q9H2X6 1198 aa11.99□□□□□ -0.49
IRF3-210ENST00000595240 TSPAN4O14817 238 aa11.98□□□□□ -0.49
IRF3-210ENST00000595240 ETV6P41212 452 aa11.98□□□□□ -0.49
IRF3-210ENST00000595240 DHODHQ02127 395 aa11.98□□□□□ -0.49
IRF3-210ENST00000595240 SELENOHQ8IZQ5 122 aaKnown RBP11.98□□□□□ -0.49
IRF3-210ENST00000595240 RNASE11Q8TAA1 199 aaKnown RBP11.98□□□□□ -0.49
IRF3-210ENST00000595240 RBPMSQ93062 196 aaKnown RBP11.98□□□□□ -0.49
IRF3-210ENST00000595240 PINX1Q96BK5 328 aaKnown RBP11.98□□□□□ -0.49
IRF3-210ENST00000595240 OR10C1Q96KK4 312 aa11.98□□□□□ -0.49
IRF3-210ENST00000595240 SPAG8Q99932 426 aaPredicted RBP11.98□□□□□ -0.49
IRF3-210ENST00000595240 RYR3Q15413 4870 aa11.98□□□□□ -0.49
IRF3-210ENST00000595240 ZNF207O43670 478 aaKnown RBP11.97□□□□□ -0.49
IRF3-210ENST00000595240 RNASE2P10153 161 aaKnown RBP11.97□□□□□ -0.49
IRF3-210ENST00000595240 HOXA1P49639 335 aaPredicted RBP11.97□□□□□ -0.49
IRF3-210ENST00000595240 CASC10Q5T4H9 136 aa11.97□□□□□ -0.49
IRF3-210ENST00000595240 RETNQ9HD89 108 aa11.97□□□□□ -0.49
IRF3-210ENST00000595240 SCP2D1Q9UJQ7 156 aa11.97□□□□□ -0.49
IRF3-210ENST00000595240 TMEM56-RWDD3S4R434 201 aa11.97□□□□□ -0.49
IRF3-210ENST00000595240 CORTO00230 105 aa11.96□□□□□ -0.49
IRF3-210ENST00000595240 GNG7O60262 68 aa11.96□□□□□ -0.49
IRF3-210ENST00000595240 LYL1P12980 280 aa11.96□□□□□ -0.49
IRF3-210ENST00000595240 SUB1P53999 127 aaKnown RBP eCLIP11.96□□□□□ -0.49
IRF3-210ENST00000595240 SPCS3P61009 180 aa11.96□□□□□ -0.49
IRF3-210ENST00000595240 BSXQ3C1V8 233 aa11.96□□□□□ -0.49
IRF3-210ENST00000595240 TMEM268Q5VZI3 342 aa11.96□□□□□ -0.49
IRF3-210ENST00000595240 OR52E5Q8NH55 327 aa11.96□□□□□ -0.49
IRF3-210ENST00000595240 TMEM230Q96A57 120 aa11.96□□□□□ -0.49
IRF3-210ENST00000595240 GALNT14Q96FL9 552 aa11.96□□□□□ -0.49
IRF3-210ENST00000595240 ENY2Q9NPA8 101 aa11.96□□□□□ -0.49
IRF3-210ENST00000595240 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.96□□□□□ -0.49
IRF3-210ENST00000595240 MCUBQ9NWR8 336 aa11.96□□□□□ -0.49
IRF3-210ENST00000595240 SMPXQ9UHP9 88 aa11.96□□□□□ -0.49
IRF3-210ENST00000595240 IGHV7-4-1A0A0J9YVY3 117 aa11.95□□□□□ -0.5
IRF3-210ENST00000595240 YIF1AO95070 293 aa11.95□□□□□ -0.5
IRF3-210ENST00000595240 NPBWR1P48145 328 aa11.95□□□□□ -0.5
IRF3-210ENST00000595240 LAMTOR1Q6IAA8 161 aa11.95□□□□□ -0.5
IRF3-210ENST00000595240 DUSP18Q8NEJ0 188 aa11.95□□□□□ -0.5
IRF3-210ENST00000595240 TRIM63Q969Q1 353 aa11.95□□□□□ -0.5
IRF3-210ENST00000595240 GPR146Q96CH1 333 aa11.95□□□□□ -0.5
IRF3-210ENST00000595240 SCGB3A2Q96PL1 93 aa11.95□□□□□ -0.5
IRF3-210ENST00000595240 RBM38Q9H0Z9 239 aaKnown RBP11.95□□□□□ -0.5
IRF3-210ENST00000595240 CACNG5Q9UF02 275 aa11.95□□□□□ -0.5
IRF3-210ENST00000595240 V9GYH0 126 aa11.95□□□□□ -0.5
IRF3-210ENST00000595240 CHEK1O14757 476 aa11.94□□□□□ -0.5
IRF3-210ENST00000595240 KLF9Q13886 244 aaPredicted RBP11.94□□□□□ -0.5
IRF3-210ENST00000595240 TMEM187Q14656 261 aa11.94□□□□□ -0.5
IRF3-210ENST00000595240 TMEM116Q8NCL8 245 aa11.94□□□□□ -0.5
IRF3-210ENST00000595240 IL22RA2Q969J5 263 aa11.94□□□□□ -0.5
IRF3-210ENST00000595240 RNF2Q99496 336 aa11.94□□□□□ -0.5
IRF3-210ENST00000595240 RHPN1-AS1Q9BWJ2 59 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms