RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 ZNF114Q8NC26 417 aa12.65□□□□□ -0.38
PNKP-204ENST00000594661 OR1L1Q8NH94 360 aa12.65□□□□□ -0.38
PNKP-204ENST00000594661 TMEM186Q96B77 213 aa12.65□□□□□ -0.38
PNKP-204ENST00000594661 OR4C12Q96R67 309 aa12.65□□□□□ -0.38
PNKP-204ENST00000594661 GNB1LQ9BYB4 327 aa12.65□□□□□ -0.38
PNKP-204ENST00000594661 C12orf77C9JDV5 145 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 IGHV1-46P01743 117 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 SELENOVP59797 346 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 PSG9Q00887 426 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 ST6GALNAC3Q8NDV1 305 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 GALMQ96C23 342 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 POLEQ07864 2286 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 ICE1Q9Y2F5 2266 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 IGHV3OR15-7A0A075B7D8 119 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 OOEPA6NGQ2 149 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 PMCHP20382 165 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 CFHR2P36980 270 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 LGALS4P56470 323 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 ZNF90Q03938 601 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 MPV17L2Q567V2 206 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 Q5PR19 223 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 BVES-AS1Q5T3Y7 98 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 DRAM1Q8N682 238 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 OR10G8Q8NGN5 311 aa12.64□□□□□ -0.39
PNKP-204ENST00000594661 LIN7CQ9NUP9 197 aaKnown RBP12.64□□□□□ -0.39
PNKP-204ENST00000594661 ITPR1Q14643 2758 aa12.63□□□□□ -0.39
PNKP-204ENST00000594661 IGKV1D-17A0A075B6S4 117 aa12.63□□□□□ -0.39
PNKP-204ENST00000594661 HMGB3O15347 200 aaKnown RBP12.63□□□□□ -0.39
PNKP-204ENST00000594661 IGKV1-39P01597 117 aa12.63□□□□□ -0.39
PNKP-204ENST00000594661 HBZP02008 142 aa12.63□□□□□ -0.39
PNKP-204ENST00000594661 IGKV1D-39P04432 117 aa12.63□□□□□ -0.39
PNKP-204ENST00000594661 IGLL1P15814 213 aa12.63□□□□□ -0.39
PNKP-204ENST00000594661 PRDX2P32119 198 aa12.63□□□□□ -0.39
PNKP-204ENST00000594661 ADIPOQQ15848 244 aa12.63□□□□□ -0.39
PNKP-204ENST00000594661 IZUMO4Q1ZYL8 232 aa12.63□□□□□ -0.39
PNKP-204ENST00000594661 ATOH7Q8N100 152 aa12.63□□□□□ -0.39
PNKP-204ENST00000594661 TPRX1Q8N7U7 411 aa12.63□□□□□ -0.39
PNKP-204ENST00000594661 OR10P1Q8NGE3 313 aa12.63□□□□□ -0.39
PNKP-204ENST00000594661 GATA4P43694 442 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 TNFAIP6P98066 277 aaPredicted RBP12.62□□□□□ -0.39
PNKP-204ENST00000594661 S100A7AQ86SG5 101 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 RCHY1Q96PM5 261 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 PSENENQ9NZ42 101 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 DOCK11Q5JSL3 2073 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 SNURFLB1AK76 121 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 CCL21O00585 134 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 CD5LO43866 347 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 LHBP01229 141 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 MT-ND6P03923 174 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 PPIAL4GP0DN37 164 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 LY6DQ14210 128 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 FAM201AQ5SY85 155 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 OR10G9Q8NGN4 311 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 OR10G7Q8NGN6 311 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 NEUROG1Q92886 237 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 BORCS7Q96B45 105 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 CLEC7AQ9BXN2 247 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 PRORYQ9H606 182 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 GCM1Q9NP62 436 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 KCNIP2Q9NS61 270 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 CACNA1DQ01668 2161 aa12.62□□□□□ -0.39
PNKP-204ENST00000594661 FAM90A27PA6NNH2 459 aa12.61□□□□□ -0.39
PNKP-204ENST00000594661 SYNGR2O43760 224 aa12.61□□□□□ -0.39
PNKP-204ENST00000594661 IER3P46695 156 aa12.61□□□□□ -0.39
PNKP-204ENST00000594661 ZNF585BQ52M93 769 aa12.61□□□□□ -0.39
PNKP-204ENST00000594661 FAM53AQ6NSI3 398 aaPredicted RBP12.61□□□□□ -0.39
PNKP-204ENST00000594661 Q6ZRM9 215 aa12.61□□□□□ -0.39
PNKP-204ENST00000594661 SSX8Q7RTT4 187 aa12.61□□□□□ -0.39
PNKP-204ENST00000594661 NINJ1Q92982 152 aa12.61□□□□□ -0.39
PNKP-204ENST00000594661 LSM10Q969L4 123 aaKnown RBP12.61□□□□□ -0.39
PNKP-204ENST00000594661 OR2D2Q9H210 308 aa12.61□□□□□ -0.39
PNKP-204ENST00000594661 CACNG5Q9UF02 275 aa12.61□□□□□ -0.39
PNKP-204ENST00000594661 UBE2L5PA0A1B0GUS4 154 aa12.61□□□□□ -0.39
PNKP-204ENST00000594661 A0A1B0GV72 72 aa12.61□□□□□ -0.39
PNKP-204ENST00000594661 NDUFB4O95168 129 aa12.61□□□□□ -0.39
PNKP-204ENST00000594661 IGKV1-5P01602 117 aa12.61□□□□□ -0.39
PNKP-204ENST00000594661 FAM90A1Q86YD7 464 aa12.61□□□□□ -0.39
PNKP-204ENST00000594661 ZNF645Q8N7E2 425 aa12.61□□□□□ -0.39
PNKP-204ENST00000594661 DERL1Q9BUN8 251 aa12.61□□□□□ -0.39
PNKP-204ENST00000594661 PEF1Q9UBV8 284 aaKnown RBP12.61□□□□□ -0.39
PNKP-204ENST00000594661 TRBV20OR9-2A0A075B6H5 130 aa12.6□□□□□ -0.39
PNKP-204ENST00000594661 PGPEP1LA6NFU8 196 aa12.6□□□□□ -0.39
PNKP-204ENST00000594661 SSTR5P35346 364 aa12.6□□□□□ -0.39
PNKP-204ENST00000594661 EDDM3AQ14507 147 aa12.6□□□□□ -0.39
PNKP-204ENST00000594661 TMEM95Q3KNT9 176 aa12.6□□□□□ -0.39
PNKP-204ENST00000594661 UFSP1Q6NVU6 142 aa12.6□□□□□ -0.39
PNKP-204ENST00000594661 WDR73Q6P4I2 378 aa12.6□□□□□ -0.39
PNKP-204ENST00000594661 C12orf54Q6X4T0 127 aa12.6□□□□□ -0.39
PNKP-204ENST00000594661 OR13A1Q8NGR1 328 aa12.6□□□□□ -0.39
PNKP-204ENST00000594661 OR1B1Q8NGR6 318 aa12.6□□□□□ -0.39
PNKP-204ENST00000594661 TSKUQ8WUA8 353 aa12.6□□□□□ -0.39
PNKP-204ENST00000594661 PSG11Q9UQ72 335 aa12.6□□□□□ -0.39
PNKP-204ENST00000594661 TRAV8-6A0A0B4J262 113 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 M0R1X1 148 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 GRNP28799 593 aaKnown RBP12.59□□□□□ -0.39
PNKP-204ENST00000594661 PLA2G5P39877 138 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 GPR6P46095 362 aaPredicted RBP12.59□□□□□ -0.39
PNKP-204ENST00000594661 SLC38A11Q08AI6 406 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 TMEM249Q2WGJ8 235 aa12.59□□□□□ -0.39
PNKP-204ENST00000594661 LCN12Q6JVE5 192 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms