RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 OR4D10Q8NGI6 311 aa17.3■□□□□ 0.36
MBD3-211ENST00000592965 DYNC2LI1Q8TCX1 351 aa17.3■□□□□ 0.36
MBD3-211ENST00000592965 RAB2BQ8WUD1 216 aa17.3■□□□□ 0.36
MBD3-211ENST00000592965 NXF2Q9GZY0 626 aaKnown RBP17.3■□□□□ 0.36
MBD3-211ENST00000592965 A0A0B4J293 547 aa17.29■□□□□ 0.36
MBD3-211ENST00000592965 IGHV7-4-1A0A0J9YVY3 117 aa17.29■□□□□ 0.36
MBD3-211ENST00000592965 C3orf85A0A1B0GTC6 90 aa17.29■□□□□ 0.36
MBD3-211ENST00000592965 AKR1C2P52895 323 aa17.29■□□□□ 0.36
MBD3-211ENST00000592965 PPP5CP53041 499 aa17.29■□□□□ 0.36
MBD3-211ENST00000592965 APOC4P55056 127 aa17.29■□□□□ 0.36
MBD3-211ENST00000592965 TMBIM6P55061 237 aa17.29■□□□□ 0.36
MBD3-211ENST00000592965 TAS2R19P59542 299 aa17.29■□□□□ 0.36
MBD3-211ENST00000592965 CCDC71LQ8N9Z2 235 aa17.29■□□□□ 0.36
MBD3-211ENST00000592965 TERB2Q8NHR7 220 aa17.29■□□□□ 0.36
MBD3-211ENST00000592965 ZFAND1Q8TCF1 268 aa17.29■□□□□ 0.36
MBD3-211ENST00000592965 UBQLN2Q9UHD9 624 aa17.29■□□□□ 0.36
MBD3-211ENST00000592965 HYDINQ4G0P3 5121 aa17.28■□□□□ 0.36
MBD3-211ENST00000592965 GABARAPH6UMI1 98 aa17.28■□□□□ 0.36
MBD3-211ENST00000592965 CTDSP2O14595 271 aa17.28■□□□□ 0.36
MBD3-211ENST00000592965 CTSDP07339 412 aaPredicted RBP17.28■□□□□ 0.36
MBD3-211ENST00000592965 SSBP1Q04837 148 aaKnown RBP17.28■□□□□ 0.36
MBD3-211ENST00000592965 SLC35G3Q8N808 338 aa17.28■□□□□ 0.36
MBD3-211ENST00000592965 OR13C8Q8NGS7 320 aa17.28■□□□□ 0.36
MBD3-211ENST00000592965 COPZ2Q9P299 210 aa17.28■□□□□ 0.36
MBD3-211ENST00000592965 TP53TG1Q9Y2A0 90 aa17.28■□□□□ 0.36
MBD3-211ENST00000592965 H3BMQ9 156 aa17.27■□□□□ 0.36
MBD3-211ENST00000592965 CHEK1O14757 476 aa17.27■□□□□ 0.36
MBD3-211ENST00000592965 ST8SIA3O43173 380 aa17.27■□□□□ 0.36
MBD3-211ENST00000592965 B3GALNT1O75752 331 aa17.27■□□□□ 0.36
MBD3-211ENST00000592965 RAB3DO95716 219 aa17.27■□□□□ 0.36
MBD3-211ENST00000592965 IGHV3-48P01763 117 aa17.27■□□□□ 0.36
MBD3-211ENST00000592965 UCP1P25874 307 aa17.27■□□□□ 0.36
MBD3-211ENST00000592965 MRPS10P82664 201 aaKnown RBP17.27■□□□□ 0.36
MBD3-211ENST00000592965 SPINK9Q5DT21 86 aa17.27■□□□□ 0.36
MBD3-211ENST00000592965 STEAP1BQ6NZ63 245 aa17.27■□□□□ 0.36
MBD3-211ENST00000592965 Q6ZWC4 215 aa17.27■□□□□ 0.36
MBD3-211ENST00000592965 TMEM116Q8NCL8 245 aa17.27■□□□□ 0.36
MBD3-211ENST00000592965 PINX1Q96BK5 328 aaKnown RBP17.27■□□□□ 0.36
MBD3-211ENST00000592965 RNF2Q99496 336 aa17.27■□□□□ 0.36
MBD3-211ENST00000592965 BCL7BQ9BQE9 202 aa17.27■□□□□ 0.36
MBD3-211ENST00000592965 RHPN1-AS1Q9BWJ2 59 aa17.27■□□□□ 0.36
MBD3-211ENST00000592965 UBE2CO00762 179 aa17.26■□□□□ 0.35
MBD3-211ENST00000592965 GNG7O60262 68 aa17.26■□□□□ 0.35
MBD3-211ENST00000592965 YIF1AO95070 293 aa17.26■□□□□ 0.35
MBD3-211ENST00000592965 SNCAP37840 140 aa17.26■□□□□ 0.35
MBD3-211ENST00000592965 TRIM16LQ309B1 348 aa17.26■□□□□ 0.35
MBD3-211ENST00000592965 PVRIGQ6DKI7 326 aa17.26■□□□□ 0.35
MBD3-211ENST00000592965 WFDC3Q8IUB2 231 aa17.26■□□□□ 0.35
MBD3-211ENST00000592965 KIR2DL5BA0A0G2JN68 375 aa17.25■□□□□ 0.35
MBD3-211ENST00000592965 KIR2DL5BA0A0G2JPC4 375 aa17.25■□□□□ 0.35
MBD3-211ENST00000592965 RGS5O15539 181 aa17.25■□□□□ 0.35
MBD3-211ENST00000592965 JTBO76095 146 aa17.25■□□□□ 0.35
MBD3-211ENST00000592965 IFNA17P01571 189 aa17.25■□□□□ 0.35
MBD3-211ENST00000592965 NPBWR1P48145 328 aa17.25■□□□□ 0.35
MBD3-211ENST00000592965 SCGB2B2Q4G0G5 96 aa17.25■□□□□ 0.35
MBD3-211ENST00000592965 KIR2DL5AQ8N109 375 aa17.25■□□□□ 0.35
MBD3-211ENST00000592965 KIR2DL5BQ8NHK3 375 aa17.25■□□□□ 0.35
MBD3-211ENST00000592965 CCDC59Q9P031 241 aaKnown RBP17.25■□□□□ 0.35
MBD3-211ENST00000592965 TRAV14DV4A0A0A6YYC5 116 aa17.24■□□□□ 0.35
MBD3-211ENST00000592965 MEF2DQ14814 521 aa17.24■□□□□ 0.35
MBD3-211ENST00000592965 SP6Q3SY56 376 aa17.24■□□□□ 0.35
MBD3-211ENST00000592965 DUSP18Q8NEJ0 188 aa17.24■□□□□ 0.35
MBD3-211ENST00000592965 MARCH1Q8TCQ1 289 aa17.24■□□□□ 0.35
MBD3-211ENST00000592965 SMIM4Q8WVI0 70 aa17.24■□□□□ 0.35
MBD3-211ENST00000592965 RRNAD1Q96FB5 475 aaKnown RBP17.24■□□□□ 0.35
MBD3-211ENST00000592965 GINS3Q9BRX5 216 aa17.24■□□□□ 0.35
MBD3-211ENST00000592965 PDCD10Q9BUL8 212 aa17.24■□□□□ 0.35
MBD3-211ENST00000592965 IGHV3-49A0A0A0MS15 119 aa17.23■□□□□ 0.35
MBD3-211ENST00000592965 CORTO00230 105 aa17.23■□□□□ 0.35
MBD3-211ENST00000592965 RNASE2P10153 161 aaKnown RBP17.23■□□□□ 0.35
MBD3-211ENST00000592965 BMI1P35226 326 aa17.23■□□□□ 0.35
MBD3-211ENST00000592965 SUB1P53999 127 aaKnown RBP eCLIP17.23■□□□□ 0.35
MBD3-211ENST00000592965 TOMM20LQ6UXN7 152 aa17.23■□□□□ 0.35
MBD3-211ENST00000592965 GALNT14Q96FL9 552 aa17.23■□□□□ 0.35
MBD3-211ENST00000592965 EPPK1P58107 5090 aaKnown RBP17.23■□□□□ 0.35
MBD3-211ENST00000592965 A0A0G2JRQ6 117 aa17.22■□□□□ 0.35
MBD3-211ENST00000592965 SPRY2O43597 315 aa17.22■□□□□ 0.35
MBD3-211ENST00000592965 HOXA1P49639 335 aaPredicted RBP17.22■□□□□ 0.35
MBD3-211ENST00000592965 SURF2Q15527 256 aaPredicted RBP17.22■□□□□ 0.35
MBD3-211ENST00000592965 DEFB135Q30KP9 77 aa17.22■□□□□ 0.35
MBD3-211ENST00000592965 AARDQ4LEZ3 155 aa17.22■□□□□ 0.35
MBD3-211ENST00000592965 FAM90A2PQ658T7 463 aa17.22■□□□□ 0.35
MBD3-211ENST00000592965 STPG3Q8N7X2 389 aa17.22■□□□□ 0.35
MBD3-211ENST00000592965 SLIRPQ9GZT3 109 aaKnown RBP17.22■□□□□ 0.35
MBD3-211ENST00000592965 TMEM222Q9H0R3 208 aa17.22■□□□□ 0.35
MBD3-211ENST00000592965 RBM38Q9H0Z9 239 aaKnown RBP17.22■□□□□ 0.35
MBD3-211ENST00000592965 CD5P06127 495 aa17.21■□□□□ 0.35
MBD3-211ENST00000592965 ETV6P41212 452 aa17.21■□□□□ 0.35
MBD3-211ENST00000592965 CMC4P56277 68 aaPredicted RBP17.21■□□□□ 0.35
MBD3-211ENST00000592965 TNFRSF9Q07011 255 aa17.21■□□□□ 0.35
MBD3-211ENST00000592965 FAAP20Q6NZ36 180 aa17.21■□□□□ 0.35
MBD3-211ENST00000592965 ZNF600Q6ZNG1 722 aa17.21■□□□□ 0.35
MBD3-211ENST00000592965 FAM219AQ8IW50 185 aa17.21■□□□□ 0.35
MBD3-211ENST00000592965 RNASE11Q8TAA1 199 aaKnown RBP17.21■□□□□ 0.35
MBD3-211ENST00000592965 C6orf62Q9GZU0 229 aaPredicted RBP17.21■□□□□ 0.35
MBD3-211ENST00000592965 ZFAND3Q9H8U3 227 aa17.21■□□□□ 0.35
MBD3-211ENST00000592965 RABL2AQ9UBK7 228 aaPredicted RBP17.21■□□□□ 0.35
MBD3-211ENST00000592965 RABL2BQ9UNT1 228 aa17.21■□□□□ 0.35
MBD3-211ENST00000592965 C14orf166Q9Y224 244 aaKnown RBP17.21■□□□□ 0.35
MBD3-211ENST00000592965 CTDSPLO15194 276 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms