RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 MT-CO2P00403 227 aa14.68□□□□□ -0.06
TNFRSF11A-204ENST00000592013 IFNA17P01571 189 aa14.68□□□□□ -0.06
TNFRSF11A-204ENST00000592013 CTSDP07339 412 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF11A-204ENST00000592013 PIGPP57054 158 aa14.68□□□□□ -0.06
TNFRSF11A-204ENST00000592013 TNFRSF9Q07011 255 aa14.68□□□□□ -0.06
TNFRSF11A-204ENST00000592013 RNASE11Q8TAA1 199 aaKnown RBP14.68□□□□□ -0.06
TNFRSF11A-204ENST00000592013 PINX1Q96BK5 328 aaKnown RBP14.68□□□□□ -0.06
TNFRSF11A-204ENST00000592013 RHPN1-AS1Q9BWJ2 59 aa14.68□□□□□ -0.06
TNFRSF11A-204ENST00000592013 CXorf65A6NEN9 183 aa14.67□□□□□ -0.06
TNFRSF11A-204ENST00000592013 F8W735 103 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF11A-204ENST00000592013 TAS2R19P59542 299 aa14.67□□□□□ -0.06
TNFRSF11A-204ENST00000592013 SSBP1Q04837 148 aaKnown RBP14.67□□□□□ -0.06
TNFRSF11A-204ENST00000592013 TRIM16LQ309B1 348 aa14.67□□□□□ -0.06
TNFRSF11A-204ENST00000592013 RABL2AQ9UBK7 228 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF11A-204ENST00000592013 EXTL2Q9UBQ6 330 aa14.67□□□□□ -0.06
TNFRSF11A-204ENST00000592013 MTFP1Q9UDX5 166 aa14.67□□□□□ -0.06
TNFRSF11A-204ENST00000592013 UBQLN2Q9UHD9 624 aa14.67□□□□□ -0.06
TNFRSF11A-204ENST00000592013 RABL2BQ9UNT1 228 aa14.67□□□□□ -0.06
TNFRSF11A-204ENST00000592013 RYR2Q92736 4967 aa14.66□□□□□ -0.06
TNFRSF11A-204ENST00000592013 C3orf85A0A1B0GTC6 90 aa14.66□□□□□ -0.06
TNFRSF11A-204ENST00000592013 DBX1A6NMT0 343 aa14.66□□□□□ -0.06
TNFRSF11A-204ENST00000592013 M0QYG6 137 aa14.66□□□□□ -0.06
TNFRSF11A-204ENST00000592013 CHEK1O14757 476 aa14.66□□□□□ -0.06
TNFRSF11A-204ENST00000592013 GABARAPO95166 117 aa14.66□□□□□ -0.06
TNFRSF11A-204ENST00000592013 MEF2DQ14814 521 aa14.66□□□□□ -0.06
TNFRSF11A-204ENST00000592013 TERB2Q8NHR7 220 aa14.66□□□□□ -0.06
TNFRSF11A-204ENST00000592013 NARS2Q96I59 477 aaKnown RBP14.66□□□□□ -0.06
TNFRSF11A-204ENST00000592013 KLK5Q9Y337 293 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF11A-204ENST00000592013 A0A1W2PS18 150 aa14.65□□□□□ -0.06
TNFRSF11A-204ENST00000592013 ZNF207O43670 478 aaKnown RBP14.65□□□□□ -0.06
TNFRSF11A-204ENST00000592013 DEFB135Q30KP9 77 aa14.65□□□□□ -0.06
TNFRSF11A-204ENST00000592013 ODF3L2Q3SX64 289 aa14.65□□□□□ -0.06
TNFRSF11A-204ENST00000592013 LHFPL1Q86WI0 220 aa14.65□□□□□ -0.06
TNFRSF11A-204ENST00000592013 FAM219AQ8IW50 185 aa14.65□□□□□ -0.06
TNFRSF11A-204ENST00000592013 TMEM229BQ8NBD8 167 aa14.65□□□□□ -0.06
TNFRSF11A-204ENST00000592013 RNF183Q96D59 192 aa14.65□□□□□ -0.06
TNFRSF11A-204ENST00000592013 RNF2Q99496 336 aa14.65□□□□□ -0.06
TNFRSF11A-204ENST00000592013 MAP6D1Q9H9H5 199 aa14.65□□□□□ -0.06
TNFRSF11A-204ENST00000592013 KLK11Q9UBX7 282 aa14.65□□□□□ -0.06
TNFRSF11A-204ENST00000592013 DFFBO76075 338 aa14.64□□□□□ -0.07
TNFRSF11A-204ENST00000592013 IGKV1-39P01597 117 aa14.64□□□□□ -0.07
TNFRSF11A-204ENST00000592013 CD3DP04234 171 aa14.64□□□□□ -0.07
TNFRSF11A-204ENST00000592013 IGKV1D-39P04432 117 aa14.64□□□□□ -0.07
TNFRSF11A-204ENST00000592013 HOXA1P49639 335 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF11A-204ENST00000592013 ZNF600Q6ZNG1 722 aa14.64□□□□□ -0.07
TNFRSF11A-204ENST00000592013 LYG2Q86SG7 212 aa14.64□□□□□ -0.07
TNFRSF11A-204ENST00000592013 GATAD1Q8WUU5 269 aa14.64□□□□□ -0.07
TNFRSF11A-204ENST00000592013 C14orf166Q9Y224 244 aaKnown RBP14.64□□□□□ -0.07
TNFRSF11A-204ENST00000592013 DYNC2H1Q8NCM8 4307 aaKnown RBP14.64□□□□□ -0.07
TNFRSF11A-204ENST00000592013 IGHV3OR16-8A0A075B7F1 116 aa14.63□□□□□ -0.07
TNFRSF11A-204ENST00000592013 TRAV2A0A0B4J234 112 aa14.63□□□□□ -0.07
TNFRSF11A-204ENST00000592013 RPS10-NUDT3A0A1W2PQS6 291 aa14.63□□□□□ -0.07
TNFRSF11A-204ENST00000592013 MPTX1A8MV57 137 aa14.63□□□□□ -0.07
TNFRSF11A-204ENST00000592013 DNASE2O00115 360 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF11A-204ENST00000592013 RAB3DO95716 219 aa14.63□□□□□ -0.07
TNFRSF11A-204ENST00000592013 EIF2B2P49770 351 aaKnown RBP14.63□□□□□ -0.07
TNFRSF11A-204ENST00000592013 SCGB2B2Q4G0G5 96 aa14.63□□□□□ -0.07
TNFRSF11A-204ENST00000592013 OR52I2Q8NH67 350 aa14.63□□□□□ -0.07
TNFRSF11A-204ENST00000592013 CSTL1Q9H114 145 aa14.63□□□□□ -0.07
TNFRSF11A-204ENST00000592013 CSMD3Q7Z407 3707 aa14.63□□□□□ -0.07
TNFRSF11A-204ENST00000592013 TRAV30A0A087WSZ9 112 aa14.62□□□□□ -0.07
TNFRSF11A-204ENST00000592013 A0A0J9YWU9 116 aa14.62□□□□□ -0.07
TNFRSF11A-204ENST00000592013 GABARAPH6UMI1 98 aa14.62□□□□□ -0.07
TNFRSF11A-204ENST00000592013 RGS5O15539 181 aa14.62□□□□□ -0.07
TNFRSF11A-204ENST00000592013 RPL11P62913 178 aaKnown RBP14.62□□□□□ -0.07
TNFRSF11A-204ENST00000592013 SURF2Q15527 256 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF11A-204ENST00000592013 CTF1Q16619 201 aa14.62□□□□□ -0.07
TNFRSF11A-204ENST00000592013 GPR107Q5VW38 600 aa14.62□□□□□ -0.07
TNFRSF11A-204ENST00000592013 STEAP1BQ6NZ63 245 aa14.62□□□□□ -0.07
TNFRSF11A-204ENST00000592013 TP53RKQ96S44 253 aa14.62□□□□□ -0.07
TNFRSF11A-204ENST00000592013 PIGBOS1A0A0B4J2F0 54 aa14.61□□□□□ -0.07
TNFRSF11A-204ENST00000592013 DISC1C4P0D8 188 aa14.61□□□□□ -0.07
TNFRSF11A-204ENST00000592013 ST8SIA3O43173 380 aa14.61□□□□□ -0.07
TNFRSF11A-204ENST00000592013 CD74P04233 296 aa14.61□□□□□ -0.07
TNFRSF11A-204ENST00000592013 RPL35AP18077 110 aaKnown RBP14.61□□□□□ -0.07
TNFRSF11A-204ENST00000592013 PI3P19957 117 aa14.61□□□□□ -0.07
TNFRSF11A-204ENST00000592013 NPPCP23582 126 aa14.61□□□□□ -0.07
TNFRSF11A-204ENST00000592013 UCP1P25874 307 aa14.61□□□□□ -0.07
TNFRSF11A-204ENST00000592013 RPL5P46777 297 aaKnown RBP14.61□□□□□ -0.07
TNFRSF11A-204ENST00000592013 PPP5CP53041 499 aa14.61□□□□□ -0.07
TNFRSF11A-204ENST00000592013 RNASE12Q5GAN4 147 aaKnown RBP14.61□□□□□ -0.07
TNFRSF11A-204ENST00000592013 TCF24Q7RTU0 167 aa14.61□□□□□ -0.07
TNFRSF11A-204ENST00000592013 NOXA1Q86UR1 476 aa14.61□□□□□ -0.07
TNFRSF11A-204ENST00000592013 GRAMD2BQ96HH9 432 aa14.61□□□□□ -0.07
TNFRSF11A-204ENST00000592013 ABHD1Q96SE0 405 aa14.61□□□□□ -0.07
TNFRSF11A-204ENST00000592013 STARD9Q9P2P6 4700 aa14.6□□□□□ -0.07
TNFRSF11A-204ENST00000592013 TEX13DA0A0J9YY54 714 aaPredicted RBP14.6□□□□□ -0.07
TNFRSF11A-204ENST00000592013 IGKV1-5P01602 117 aa14.6□□□□□ -0.07
TNFRSF11A-204ENST00000592013 OPRK1P41145 380 aa14.6□□□□□ -0.07
TNFRSF11A-204ENST00000592013 HTR2BP41595 481 aa14.6□□□□□ -0.07
TNFRSF11A-204ENST00000592013 TFPI2P48307 235 aa14.6□□□□□ -0.07
TNFRSF11A-204ENST00000592013 SPCS3P61009 180 aa14.6□□□□□ -0.07
TNFRSF11A-204ENST00000592013 DHODHQ02127 395 aa14.6□□□□□ -0.07
TNFRSF11A-204ENST00000592013 TOMM20LQ6UXN7 152 aa14.6□□□□□ -0.07
TNFRSF11A-204ENST00000592013 GPR141Q7Z602 305 aa14.6□□□□□ -0.07
TNFRSF11A-204ENST00000592013 OR52E5Q8NH55 327 aa14.6□□□□□ -0.07
TNFRSF11A-204ENST00000592013 METTL26Q96S19 204 aa14.6□□□□□ -0.07
TNFRSF11A-204ENST00000592013 MFFQ9GZY8 342 aa14.6□□□□□ -0.07
TNFRSF11A-204ENST00000592013 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.6□□□□□ -0.07
TNFRSF11A-204ENST00000592013 PUS1Q9Y606 427 aaKnown RBP eCLIP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms