RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 ZNF709Q8N972 641 aa13.48□□□□□ -0.25
GCDH-212ENST00000590530 ZNF114Q8NC26 417 aa13.48□□□□□ -0.25
GCDH-212ENST00000590530 SRSF8Q9BRL6 282 aaKnown RBP13.48□□□□□ -0.25
GCDH-212ENST00000590530 KIAA1456Q9P272 454 aa13.48□□□□□ -0.25
GCDH-212ENST00000590530 FAM96BQ9Y3D0 163 aa13.48□□□□□ -0.25
GCDH-212ENST00000590530 LSM4Q9Y4Z0 139 aaKnown RBP13.48□□□□□ -0.25
GCDH-212ENST00000590530 SONP18583 2426 aaKnown RBP13.48□□□□□ -0.25
GCDH-212ENST00000590530 SUB1P53999 127 aaKnown RBP eCLIP13.48□□□□□ -0.25
GCDH-212ENST00000590530 SSX3Q99909 188 aa13.48□□□□□ -0.25
GCDH-212ENST00000590530 NPVFQ9HCQ7 196 aa13.48□□□□□ -0.25
GCDH-212ENST00000590530 RPRMQ9NS64 109 aa13.48□□□□□ -0.25
GCDH-212ENST00000590530 MXRA5Q9NR99 2828 aa13.48□□□□□ -0.25
GCDH-212ENST00000590530 TRAV1-1A0A0B4J248 108 aa13.47□□□□□ -0.25
GCDH-212ENST00000590530 SMCO3A2RU48 225 aa13.47□□□□□ -0.25
GCDH-212ENST00000590530 SH2D7A6NKC9 451 aaPredicted RBP13.47□□□□□ -0.25
GCDH-212ENST00000590530 NCBP2LA6PVI3 153 aaKnown RBP13.47□□□□□ -0.25
GCDH-212ENST00000590530 CYSRT1A8MQ03 144 aa13.47□□□□□ -0.25
GCDH-212ENST00000590530 MBP02144 154 aa13.47□□□□□ -0.25
GCDH-212ENST00000590530 H2AFB1P0C5Y9 115 aa13.47□□□□□ -0.25
GCDH-212ENST00000590530 GNB1P62873 340 aa13.47□□□□□ -0.25
GCDH-212ENST00000590530 PLGLAQ15195 96 aa13.47□□□□□ -0.25
GCDH-212ENST00000590530 PVRIGQ6DKI7 326 aa13.47□□□□□ -0.25
GCDH-212ENST00000590530 NANPQ8TBE9 248 aa13.47□□□□□ -0.25
GCDH-212ENST00000590530 RNASEH2CQ8TDP1 164 aaKnown RBP13.47□□□□□ -0.25
GCDH-212ENST00000590530 KCNIP2Q9NS61 270 aa13.47□□□□□ -0.25
GCDH-212ENST00000590530 HBE1P02100 147 aa13.46□□□□□ -0.25
GCDH-212ENST00000590530 FAM106CPP0CH98 169 aa13.46□□□□□ -0.25
GCDH-212ENST00000590530 APELAP0DMC3 54 aa13.46□□□□□ -0.25
GCDH-212ENST00000590530 OR13C7P0DN81 318 aa13.46□□□□□ -0.25
GCDH-212ENST00000590530 BRS3P32247 399 aa13.46□□□□□ -0.25
GCDH-212ENST00000590530 LY6EQ16553 131 aa13.46□□□□□ -0.25
GCDH-212ENST00000590530 ACSM6Q6P461 480 aa13.46□□□□□ -0.25
GCDH-212ENST00000590530 LINC00052Q96N35 136 aa13.46□□□□□ -0.25
GCDH-212ENST00000590530 TEX22C9J3V5 150 aa13.46□□□□□ -0.26
GCDH-212ENST00000590530 GPX4P36969 197 aaPredicted RBP13.46□□□□□ -0.26
GCDH-212ENST00000590530 OPRK1P41145 380 aa13.46□□□□□ -0.26
GCDH-212ENST00000590530 ELLP55199 621 aaPredicted RBP13.46□□□□□ -0.26
GCDH-212ENST00000590530 CD69Q07108 199 aa13.46□□□□□ -0.26
GCDH-212ENST00000590530 C5orf64Q2M2E5 130 aa13.46□□□□□ -0.26
GCDH-212ENST00000590530 SPSB3Q6PJ21 355 aa13.46□□□□□ -0.26
GCDH-212ENST00000590530 BPIFCQ8NFQ6 507 aa13.46□□□□□ -0.26
GCDH-212ENST00000590530 SRSF12Q8WXF0 261 aaKnown RBP13.46□□□□□ -0.26
GCDH-212ENST00000590530 CACNG8Q8WXS5 425 aa13.46□□□□□ -0.26
GCDH-212ENST00000590530 ZNF48Q96MX3 618 aaPredicted RBP13.46□□□□□ -0.26
GCDH-212ENST00000590530 P2RX4Q99571 388 aa13.46□□□□□ -0.26
GCDH-212ENST00000590530 MGST2Q99735 147 aa13.46□□□□□ -0.26
GCDH-212ENST00000590530 VSIRQ9H7M9 311 aa13.46□□□□□ -0.26
GCDH-212ENST00000590530 H3BUX3 64 aa13.45□□□□□ -0.26
GCDH-212ENST00000590530 CD5LO43866 347 aa13.45□□□□□ -0.26
GCDH-212ENST00000590530 AKR1C1Q04828 323 aa13.45□□□□□ -0.26
GCDH-212ENST00000590530 TEPPQ6URK8 271 aa13.45□□□□□ -0.26
GCDH-212ENST00000590530 Q8N9W7 124 aa13.45□□□□□ -0.26
GCDH-212ENST00000590530 MBD3L1Q8WWY6 194 aa13.45□□□□□ -0.26
GCDH-212ENST00000590530 RCC1LQ96I51 464 aaKnown RBP13.45□□□□□ -0.26
GCDH-212ENST00000590530 GGTLC1Q9BX51 225 aa13.45□□□□□ -0.26
GCDH-212ENST00000590530 CD5P06127 495 aa13.44□□□□□ -0.26
GCDH-212ENST00000590530 FBP1P09467 338 aa13.44□□□□□ -0.26
GCDH-212ENST00000590530 RAB2AP61019 212 aa13.44□□□□□ -0.26
GCDH-212ENST00000590530 FFAR4Q5NUL3 377 aa13.44□□□□□ -0.26
GCDH-212ENST00000590530 C19orf35Q6ZS72 473 aa13.44□□□□□ -0.26
GCDH-212ENST00000590530 YAE1D1Q9NRH1 226 aa13.44□□□□□ -0.26
GCDH-212ENST00000590530 NAV3Q8IVL0 2385 aa13.44□□□□□ -0.26
GCDH-212ENST00000590530 AGPAT2O15120 278 aa13.44□□□□□ -0.26
GCDH-212ENST00000590530 ZNF726P1Q15940 193 aa13.44□□□□□ -0.26
GCDH-212ENST00000590530 SLC16A13Q7RTY0 426 aa13.44□□□□□ -0.26
GCDH-212ENST00000590530 TMEM144Q7Z5S9 345 aa13.44□□□□□ -0.26
GCDH-212ENST00000590530 SCRT1Q9BWW7 348 aa13.44□□□□□ -0.26
GCDH-212ENST00000590530 SETXQ7Z333 2677 aaKnown RBP13.43□□□□□ -0.26
GCDH-212ENST00000590530 IGHV4-59P01825 116 aa13.43□□□□□ -0.26
GCDH-212ENST00000590530 SRSF3P84103 164 aaKnown RBP13.43□□□□□ -0.26
GCDH-212ENST00000590530 NDPQ00604 133 aa13.43□□□□□ -0.26
GCDH-212ENST00000590530 RAB31Q13636 194 aa13.43□□□□□ -0.26
GCDH-212ENST00000590530 OR1P1Q8NH06 330 aa13.43□□□□□ -0.26
GCDH-212ENST00000590530 SFT2D1Q8WV19 159 aa13.43□□□□□ -0.26
GCDH-212ENST00000590530 FAM103A1Q9BTL3 118 aaKnown RBP13.43□□□□□ -0.26
GCDH-212ENST00000590530 PBDC1Q9BVG4 233 aa13.43□□□□□ -0.26
GCDH-212ENST00000590530 TNFRSF19Q9NS68 423 aa13.43□□□□□ -0.26
GCDH-212ENST00000590530 TMEM218A2RU14 115 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 REG1AP05451 166 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 AREGP15514 252 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 M6PRP20645 277 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 GAMTQ14353 236 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 ACOT6Q3I5F7 207 aaPredicted RBP13.42□□□□□ -0.26
GCDH-212ENST00000590530 RPP25LQ8N5L8 163 aaKnown RBP13.42□□□□□ -0.26
GCDH-212ENST00000590530 NARS2Q96I59 477 aaKnown RBP13.42□□□□□ -0.26
GCDH-212ENST00000590530 SLC35E1Q96K37 410 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 C1RLQ9NZP8 487 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 CUBNO60494 3623 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 CORTO00230 105 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 AMY1AP04745 511 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 GUK1Q16774 197 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 SPNS3Q6ZMD2 512 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 OR10G4Q8NGN3 311 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 OR10G9Q8NGN4 311 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 OR10G7Q8NGN6 311 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 HSPB9Q9BQS6 159 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 TREM1Q9NP99 234 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 F11RQ9Y624 299 aaKnown RBP13.42□□□□□ -0.26
GCDH-212ENST00000590530 PXMP4Q9Y6I8 212 aa13.42□□□□□ -0.26
GCDH-212ENST00000590530 CTXND1A0A1B0GTU2 59 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms