RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 FAM223AQ8IWN6 122 aa11.82□□□□□ -0.52
ATG4D-211ENST00000589753 C11orf44Q8N8P7 122 aa11.82□□□□□ -0.52
ATG4D-211ENST00000589753 NECAP1Q8NC96 275 aa11.82□□□□□ -0.52
ATG4D-211ENST00000589753 TMEM170AQ8WVE7 144 aa11.82□□□□□ -0.52
ATG4D-211ENST00000589753 MISP3Q96FF7 219 aa11.82□□□□□ -0.52
ATG4D-211ENST00000589753 OR4C12Q96R67 309 aa11.82□□□□□ -0.52
ATG4D-211ENST00000589753 OR5AC2Q9NZP5 309 aa11.82□□□□□ -0.52
ATG4D-211ENST00000589753 FBXL7Q9UJT9 491 aa11.82□□□□□ -0.52
ATG4D-211ENST00000589753 PAIP2BQ9ULR5 123 aaKnown RBP11.82□□□□□ -0.52
ATG4D-211ENST00000589753 TCRBV4S1A1TA0A5B7 111 aa11.81□□□□□ -0.52
ATG4D-211ENST00000589753 C15orf62A8K5M9 175 aa11.81□□□□□ -0.52
ATG4D-211ENST00000589753 E5RGE8 158 aa11.81□□□□□ -0.52
ATG4D-211ENST00000589753 NDUFB8O95169 186 aa11.81□□□□□ -0.52
ATG4D-211ENST00000589753 OR8U8P0C7N1 319 aa11.81□□□□□ -0.52
ATG4D-211ENST00000589753 CAV2P51636 162 aa11.81□□□□□ -0.52
ATG4D-211ENST00000589753 DEFA5Q01523 94 aa11.81□□□□□ -0.52
ATG4D-211ENST00000589753 FGL1Q08830 312 aa11.81□□□□□ -0.52
ATG4D-211ENST00000589753 KHDC1LQ5JSQ8 128 aa11.81□□□□□ -0.52
ATG4D-211ENST00000589753 PRSS54Q6PEW0 395 aa11.81□□□□□ -0.52
ATG4D-211ENST00000589753 C12orf54Q6X4T0 127 aa11.81□□□□□ -0.52
ATG4D-211ENST00000589753 OR2T35Q8NGX2 323 aa11.81□□□□□ -0.52
ATG4D-211ENST00000589753 THAP6Q8TBB0 222 aa11.81□□□□□ -0.52
ATG4D-211ENST00000589753 MYOZ3Q8TDC0 251 aa11.81□□□□□ -0.52
ATG4D-211ENST00000589753 USMG5Q96IX5 58 aa11.81□□□□□ -0.52
ATG4D-211ENST00000589753 TRAV14DV4A0A0A6YYC5 116 aa11.8□□□□□ -0.52
ATG4D-211ENST00000589753 A0A0G2JLM5 398 aa11.8□□□□□ -0.52
ATG4D-211ENST00000589753 IFNA4P05014 189 aa11.8□□□□□ -0.52
ATG4D-211ENST00000589753 ATP5G2Q06055 141 aa11.8□□□□□ -0.52
ATG4D-211ENST00000589753 EXOSC2Q13868 293 aaKnown RBP11.8□□□□□ -0.52
ATG4D-211ENST00000589753 KIAA0141Q14154 515 aaPredicted RBP11.8□□□□□ -0.52
ATG4D-211ENST00000589753 C15orf32Q32M92 178 aa11.8□□□□□ -0.52
ATG4D-211ENST00000589753 ZNF491Q8N8L2 437 aa11.8□□□□□ -0.52
ATG4D-211ENST00000589753 RNASEH2CQ8TDP1 164 aaKnown RBP11.8□□□□□ -0.52
ATG4D-211ENST00000589753 PINX1Q96BK5 328 aaKnown RBP11.8□□□□□ -0.52
ATG4D-211ENST00000589753 CITED2Q99967 270 aaPredicted RBP11.8□□□□□ -0.52
ATG4D-211ENST00000589753 RNF126Q9BV68 326 aa11.8□□□□□ -0.52
ATG4D-211ENST00000589753 RANGRFQ9HD47 186 aaPredicted RBP11.8□□□□□ -0.52
ATG4D-211ENST00000589753 LYRM2Q9NU23 88 aaPredicted RBP11.8□□□□□ -0.52
ATG4D-211ENST00000589753 MBD2Q9UBB5 411 aa11.8□□□□□ -0.52
ATG4D-211ENST00000589753 FAM24AA6NFZ4 105 aa11.79□□□□□ -0.52
ATG4D-211ENST00000589753 CCNKO75909 580 aa11.79□□□□□ -0.52
ATG4D-211ENST00000589753 MT-CO2P00403 227 aa11.79□□□□□ -0.52
ATG4D-211ENST00000589753 OPRK1P41145 380 aa11.79□□□□□ -0.52
ATG4D-211ENST00000589753 P2RY1P47900 373 aa11.79□□□□□ -0.52
ATG4D-211ENST00000589753 CDX1P47902 265 aaPredicted RBP11.79□□□□□ -0.52
ATG4D-211ENST00000589753 Q5BKY6 102 aa11.79□□□□□ -0.52
ATG4D-211ENST00000589753 HIST2H2BDQ6DRA6 164 aa11.79□□□□□ -0.52
ATG4D-211ENST00000589753 TMEM14EPQ6UXP3 125 aa11.79□□□□□ -0.52
ATG4D-211ENST00000589753 ETV3LQ6ZN32 361 aa11.79□□□□□ -0.52
ATG4D-211ENST00000589753 C3orf56Q8N813 242 aa11.79□□□□□ -0.52
ATG4D-211ENST00000589753 CXorf58Q96LI9 332 aa11.79□□□□□ -0.52
ATG4D-211ENST00000589753 UBE2E2Q96LR5 201 aa11.79□□□□□ -0.52
ATG4D-211ENST00000589753 TSSC4Q9Y5U2 329 aaPredicted RBP11.79□□□□□ -0.52
ATG4D-211ENST00000589753 IGHV3-21A0A0B4J1V1 117 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 RPS10-NUDT3A0A1W2PQS6 291 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 I3L2K1 104 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 K7EIM0 57 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 IGHV3-11P01762 117 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 METTL15P1P0C7V9 234 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 LYL1P12980 280 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 AKAP14Q86UN6 197 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 VN1R17PQ8TDU5 208 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 SCARB1Q8WTV0 552 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 DCUN1D4Q92564 292 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 EEF1AKMT3Q96AZ1 226 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 ST6GAL2Q96JF0 529 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 MDFIQ99750 246 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 CITED1Q99966 193 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 ZNF747Q9BV97 191 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 GNB4Q9HAV0 340 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 S4R3C0 116 aa11.78□□□□□ -0.52
ATG4D-211ENST00000589753 FBN1P35555 2871 aaKnown RBP11.78□□□□□ -0.52
ATG4D-211ENST00000589753 MFSD2BA6NFX1 497 aa11.77□□□□□ -0.53
ATG4D-211ENST00000589753 CD69Q07108 199 aa11.77□□□□□ -0.53
ATG4D-211ENST00000589753 OR8G2PQ6IF36 304 aa11.77□□□□□ -0.53
ATG4D-211ENST00000589753 ETFRF1Q6IPR1 90 aa11.77□□□□□ -0.53
ATG4D-211ENST00000589753 NDUFA11Q86Y39 141 aa11.77□□□□□ -0.53
ATG4D-211ENST00000589753 TMEM252Q8N6L7 170 aa11.77□□□□□ -0.53
ATG4D-211ENST00000589753 SLC25A31Q9H0C2 315 aa11.77□□□□□ -0.53
ATG4D-211ENST00000589753 FNDC4Q9H6D8 234 aaPredicted RBP11.77□□□□□ -0.53
ATG4D-211ENST00000589753 TRBV7-1A0A0A6YYK4 115 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 A0A1W2PRX2 142 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 IGSF23A1L1A6 192 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 PMS2P5A8MQ11 134 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 NUDT19A8MXV4 375 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 PRSS46E5RG02 174 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 G3V3Q6 166 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 SMLR1H3BR10 107 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 SCAF4O95104 1147 aaKnown RBP11.76□□□□□ -0.53
ATG4D-211ENST00000589753 IGHV3-48P01763 117 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 IGHV3-23P01764 117 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 LGALS1P09382 135 aaKnown RBP11.76□□□□□ -0.53
ATG4D-211ENST00000589753 SLC25A4P12235 298 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 GPX4P36969 197 aaPredicted RBP11.76□□□□□ -0.53
ATG4D-211ENST00000589753 SULT1A1P50225 295 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 MLANAQ16655 118 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 KRTAP21-3Q3LHN1 58 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 ZNF343Q6P1L6 599 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 STX12Q86Y82 276 aa11.76□□□□□ -0.53
ATG4D-211ENST00000589753 TCTE3Q8IZS6 198 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms