RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 SGMS2Q8NHU3 365 aa16.64■□□□□ 0.25
R3HDM4-204ENST00000589428 STRAPQ9Y3F4 350 aaKnown RBP16.64■□□□□ 0.25
R3HDM4-204ENST00000589428 RNASE2P10153 161 aaKnown RBP16.63■□□□□ 0.25
R3HDM4-204ENST00000589428 NPY1RP25929 384 aa16.63■□□□□ 0.25
R3HDM4-204ENST00000589428 ERHP84090 104 aaKnown RBP16.63■□□□□ 0.25
R3HDM4-204ENST00000589428 EWSR1Q01844 656 aaKnown RBP eCLIP16.63■□□□□ 0.257e-7■■■■□ 20.9
R3HDM4-204ENST00000589428 LGALSLQ3ZCW2 172 aaPredicted RBP16.63■□□□□ 0.25
R3HDM4-204ENST00000589428 KHDC1LQ5JSQ8 128 aa16.63■□□□□ 0.25
R3HDM4-204ENST00000589428 TEX38Q6PEX7 206 aa16.63■□□□□ 0.25
R3HDM4-204ENST00000589428 C19orf35Q6ZS72 473 aa16.63■□□□□ 0.25
R3HDM4-204ENST00000589428 LFNGQ8NES3 379 aa16.63■□□□□ 0.25
R3HDM4-204ENST00000589428 CITED2Q99967 270 aaPredicted RBP16.63■□□□□ 0.25
R3HDM4-204ENST00000589428 G3V318 75 aa16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 METTL15P1P0C7V9 234 aa16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 NUP62P37198 522 aaPredicted RBP16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 HTR2BP41595 481 aa16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 CRIP2P52943 208 aaPredicted RBP16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 ZNF345Q14585 488 aa16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 PAIP2BQ9ULR5 123 aaKnown RBP16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 M0QZ24 198 aa16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 CST7O76096 145 aa16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 SNCAP37840 140 aa16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 NHLH2Q02577 135 aa16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 CFHR3Q02985 330 aa16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 HIST2H2BDQ6DRA6 164 aa16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 ZNF114Q8NC26 417 aa16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 BSCL2Q96G97 398 aaPredicted RBP16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 P2RX4Q99571 388 aa16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 SLC25A31Q9H0C2 315 aa16.62■□□□□ 0.25
R3HDM4-204ENST00000589428 TCRBV4S1A1TA0A5B7 111 aa16.61■□□□□ 0.25
R3HDM4-204ENST00000589428 SULT1A1P50225 295 aa16.61■□□□□ 0.25
R3HDM4-204ENST00000589428 RPP30P78346 268 aaKnown RBP16.61■□□□□ 0.25
R3HDM4-204ENST00000589428 OR2F1Q13607 317 aa16.61■□□□□ 0.25
R3HDM4-204ENST00000589428 C2orf83Q53S99 150 aa16.61■□□□□ 0.25
R3HDM4-204ENST00000589428 UNQ5815/PRO19632Q6UWF5 114 aa16.61■□□□□ 0.25
R3HDM4-204ENST00000589428 HAPLN4Q86UW8 402 aa16.61■□□□□ 0.25
R3HDM4-204ENST00000589428 STX12Q86Y82 276 aa16.61■□□□□ 0.25
R3HDM4-204ENST00000589428 ZC4H2Q9NQZ6 224 aa16.61■□□□□ 0.25
R3HDM4-204ENST00000589428 HSPB11Q9Y547 144 aa16.61■□□□□ 0.25
R3HDM4-204ENST00000589428 CTRB1P17538 263 aa16.6■□□□□ 0.25
R3HDM4-204ENST00000589428 TCTEX1D4Q5JR98 221 aa16.6■□□□□ 0.25
R3HDM4-204ENST00000589428 CTRB2Q6GPI1 263 aa16.6■□□□□ 0.25
R3HDM4-204ENST00000589428 NDUFA11Q86Y39 141 aa16.6■□□□□ 0.25
R3HDM4-204ENST00000589428 KCNRGQ8N5I3 272 aa16.6■□□□□ 0.25
R3HDM4-204ENST00000589428 PMS2P5A8MQ11 134 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 NPIPB5A8MRT5 1133 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 IGHG4P01861 327 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 ELANEP08246 267 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 OR8U8P0C7N1 319 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 MFAP2P55001 183 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 BAXQ07812 192 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 ARL16Q0P5N6 197 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 FOXE3Q13461 319 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 NSUN5P1Q3KNT7 163 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 AKIRIN2Q53H80 203 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 C19orf54Q5BKX5 351 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 TMEM217Q8N7C4 229 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 DMRT1Q9Y5R6 373 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 TSSC4Q9Y5U2 329 aaPredicted RBP16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 F11RQ9Y624 299 aaKnown RBP16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 CRYGCP07315 174 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 PPIFP30405 207 aaKnown RBP16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 OR8G2PQ6IF36 304 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 TTC9CQ8N5M4 171 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 BOLA1Q9Y3E2 137 aa16.59■□□□□ 0.25
R3HDM4-204ENST00000589428 A0A0D9SG52 128 aa16.58■□□□□ 0.24
R3HDM4-204ENST00000589428 ATP5IP56385 69 aaPredicted RBP16.58■□□□□ 0.24
R3HDM4-204ENST00000589428 TMUB2Q71RG4 321 aa16.58■□□□□ 0.24
R3HDM4-204ENST00000589428 OR1P1Q8NH06 330 aa16.58■□□□□ 0.24
R3HDM4-204ENST00000589428 TMEM68Q96MH6 324 aa16.58■□□□□ 0.24
R3HDM4-204ENST00000589428 ARL6Q9H0F7 186 aa16.58■□□□□ 0.24
R3HDM4-204ENST00000589428 FBXL17Q9UF56 701 aa16.58■□□□□ 0.24
R3HDM4-204ENST00000589428 A0A1W2PRX2 142 aa16.57■□□□□ 0.24
R3HDM4-204ENST00000589428 PRSS46E5RG02 174 aa16.57■□□□□ 0.24
R3HDM4-204ENST00000589428 IFNA4P05014 189 aa16.57■□□□□ 0.24
R3HDM4-204ENST00000589428 RAB11AP62491 216 aa16.57■□□□□ 0.24
R3HDM4-204ENST00000589428 PVRIGQ6DKI7 326 aa16.57■□□□□ 0.24
R3HDM4-204ENST00000589428 ETV3LQ6ZN32 361 aa16.57■□□□□ 0.24
R3HDM4-204ENST00000589428 OR5T1Q8NG75 326 aa16.57■□□□□ 0.24
R3HDM4-204ENST00000589428 SMIM3Q9BZL3 60 aa16.57■□□□□ 0.24
R3HDM4-204ENST00000589428 PF4V1P10720 104 aa16.56■□□□□ 0.24
R3HDM4-204ENST00000589428 S100A11P31949 105 aa16.56■□□□□ 0.24
R3HDM4-204ENST00000589428 SUB1P53999 127 aaKnown RBP eCLIP16.56■□□□□ 0.24
R3HDM4-204ENST00000589428 OR5C1Q8NGR4 320 aa16.56■□□□□ 0.24
R3HDM4-204ENST00000589428 FAM110DQ8TAY7 271 aaPredicted RBP16.56■□□□□ 0.24
R3HDM4-204ENST00000589428 IGLV1-40P01703 118 aa16.56■□□□□ 0.24
R3HDM4-204ENST00000589428 PRH1P02810 166 aa16.56■□□□□ 0.24
R3HDM4-204ENST00000589428 PSMB8P28062 276 aa16.56■□□□□ 0.24
R3HDM4-204ENST00000589428 SLC38A11Q08AI6 406 aa16.56■□□□□ 0.24
R3HDM4-204ENST00000589428 LCNL1Q6ZST4 164 aa16.56■□□□□ 0.24
R3HDM4-204ENST00000589428 RNF152Q8N8N0 203 aa16.56■□□□□ 0.24
R3HDM4-204ENST00000589428 SOX15O60248 233 aa16.55■□□□□ 0.24
R3HDM4-204ENST00000589428 RPLP1P05386 114 aaKnown RBP16.55■□□□□ 0.24
R3HDM4-204ENST00000589428 DEFA4P12838 97 aa16.55■□□□□ 0.24
R3HDM4-204ENST00000589428 HBG1P69891 147 aa16.55■□□□□ 0.24
R3HDM4-204ENST00000589428 HBG2P69892 147 aa16.55■□□□□ 0.24
R3HDM4-204ENST00000589428 CLINT1Q14677 625 aa16.55■□□□□ 0.24
R3HDM4-204ENST00000589428 OR10P1Q8NGE3 313 aa16.55■□□□□ 0.24
R3HDM4-204ENST00000589428 BCL2L11O43521 198 aa16.54■□□□□ 0.24
R3HDM4-204ENST00000589428 OR1S2Q8NGQ3 325 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms