RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 A6NJ64 397 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 C17orf98A8MV24 154 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 TRDCB7Z8K6 153 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 NAPSAO96009 420 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 RLN2P04090 185 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 CTXN2P0C2S0 81 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF735P0CB33 412 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 SAA2P0DJI9 122 aaPredicted RBP2.59□□□□□ -1.99
ZNF540-207ENST00000589285 NQO2P16083 231 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 MC5RP33032 325 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 FAUP35544 74 aaKnown RBP2.59□□□□□ -1.99
ZNF540-207ENST00000589285 AP3S2P59780 193 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 LMO4P61968 165 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 RRAS2P62070 204 aaPredicted RBP2.59□□□□□ -1.99
ZNF540-207ENST00000589285 C17orf58Q2M2W7 97 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 NCR3LG1Q68D85 454 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 DYNAPQ8N1N2 210 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 EIF4E3Q8N5X7 224 aaKnown RBP2.59□□□□□ -1.99
ZNF540-207ENST00000589285 DRAM1Q8N682 238 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 C10orf105Q8TEF2 133 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 CORO2AQ92828 525 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 RPEQ96AT9 228 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 UHRF2Q96PU4 802 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 TP53RKQ96S44 253 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 TM2D1Q9BX74 207 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 SMIM3Q9BZL3 60 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 PATZ1Q9HBE1 687 aaKnown RBP2.59□□□□□ -1.99
ZNF540-207ENST00000589285 RCC2Q9P258 522 aaKnown RBP2.59□□□□□ -1.99
ZNF540-207ENST00000589285 C14orf166Q9Y224 244 aaKnown RBP2.59□□□□□ -1.99
ZNF540-207ENST00000589285 KCNIP3Q9Y2W7 256 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 LSM5Q9Y4Y9 91 aaKnown RBP2.59□□□□□ -1.99
ZNF540-207ENST00000589285 TRAV3A0A0B4J244 114 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 KIR2DS1A0A191URI9 304 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 KBTBD11-OT1A0A1B0GTJ5 212 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 A0A1B0GV50 99 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 H0Y8G0 127 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 MPC2O95563 127 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 PRH1P02810 166 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 SERPINE2P07093 398 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 IAPPP10997 89 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 SAA4P35542 130 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 SRP14P37108 136 aaKnown RBP2.59□□□□□ -1.99
ZNF540-207ENST00000589285 KIR2DS4P43632 304 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 PPOXP50336 477 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 MRPS11P82912 194 aaKnown RBP2.59□□□□□ -1.99
ZNF540-207ENST00000589285 TNFRSF9Q07011 255 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 FGL1Q08830 312 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 DHRS2Q13268 280 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 KIR2DS1Q14954 304 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 TMEM249Q2WGJ8 235 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 ZNF841Q6ZN19 808 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 HOGA1Q86XE5 327 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 MRPS24Q96EL2 167 aaKnown RBP2.59□□□□□ -1.99
ZNF540-207ENST00000589285 OR5B12Q96R08 314 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 MRPL20Q9BYC9 149 aaKnown RBP2.59□□□□□ -1.99
ZNF540-207ENST00000589285 MED28Q9H204 178 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 HES4Q9HCC6 221 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 RASL12Q9NYN1 266 aa2.59□□□□□ -1.99
ZNF540-207ENST00000589285 FXYD6-FXYD2A0A087WZ82 144 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 C9orf170A2RU37 121 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 RNASEK-C17orf49H0YIS7 233 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 M0QZK8 103 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 ATG12O94817 140 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 S1PR2O95136 353 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 IGHV2-5P01817 119 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 IGHV1-8P0DP01 117 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 SLC6A1P30531 599 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 MORN2Q502X0 79 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 KLF17Q5JT82 389 aaPredicted RBP2.59□□□□□ -2
ZNF540-207ENST00000589285 FAM120AOSQ5T036 256 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 LCE1FQ5T754 118 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 LPCAT3Q6P1A2 487 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 PET117Q6UWS5 81 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 ASCL4Q6XD76 172 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 DUSP18Q8NEJ0 188 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 OR5D13Q8NGL4 314 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 PINX1Q96BK5 328 aaKnown RBP2.59□□□□□ -2
ZNF540-207ENST00000589285 C5orf30Q96GV9 206 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 SOSTQ9BQB4 213 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 C7orf50Q9BRJ6 194 aaKnown RBP2.59□□□□□ -2
ZNF540-207ENST00000589285 FXYD6Q9H0Q3 95 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 ZNF355PQ9NSJ1 428 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 INSIG2Q9Y5U4 225 aa2.59□□□□□ -2
ZNF540-207ENST00000589285 A0A087X002 238 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 IGHV2-26A0A0B4J1V2 119 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 A0A0G2JRQ6 117 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 FOXI3A8MTJ6 420 aaPredicted RBP2.58□□□□□ -2
ZNF540-207ENST00000589285 IGKV1D-33P01593 117 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 IGKV1-33P01594 117 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 APOHP02749 345 aaPredicted RBP2.58□□□□□ -2
ZNF540-207ENST00000589285 CRYGCP07315 174 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 MSMBP08118 114 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 CD34P28906 385 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 CRIP2P52943 208 aaPredicted RBP2.58□□□□□ -2
ZNF540-207ENST00000589285 TAS2R46P59540 309 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 ARL6IP1Q15041 203 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 MMDQ15546 238 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 ANKRD55Q3KP44 614 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 NHLRC3Q5JS37 347 aa2.58□□□□□ -2
ZNF540-207ENST00000589285 GPR157Q5UAW9 335 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms