RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ZNF767PQ75MW2 155 aa17.58■□□□□ 0.41
ATG4D-209ENST00000588857 LFNGQ8NES3 379 aa17.58■□□□□ 0.41
ATG4D-209ENST00000588857 SCGB1C1Q8TD33 95 aa17.58■□□□□ 0.41
ATG4D-209ENST00000588857 PHYHIPLQ96FC7 376 aa17.58■□□□□ 0.41
ATG4D-209ENST00000588857 FBXO7Q9Y3I1 522 aa17.58■□□□□ 0.41
ATG4D-209ENST00000588857 F11RQ9Y624 299 aaKnown RBP17.58■□□□□ 0.41
ATG4D-209ENST00000588857 UBE2L5PA0A1B0GUS4 154 aa17.57■□□□□ 0.4
ATG4D-209ENST00000588857 RGS13O14921 159 aa17.57■□□□□ 0.4
ATG4D-209ENST00000588857 EGR2P11161 476 aaPredicted RBP17.57■□□□□ 0.4
ATG4D-209ENST00000588857 EIF5AL1Q6IS14 154 aaKnown RBP17.57■□□□□ 0.4
ATG4D-209ENST00000588857 ALKAL2Q6UX46 152 aa17.57■□□□□ 0.4
ATG4D-209ENST00000588857 HSD17B11Q8NBQ5 300 aa17.57■□□□□ 0.4
ATG4D-209ENST00000588857 SGMS2Q8NHU3 365 aa17.57■□□□□ 0.4
ATG4D-209ENST00000588857 GINS3Q9BRX5 216 aa17.57■□□□□ 0.4
ATG4D-209ENST00000588857 ARV1Q9H2C2 271 aa17.57■□□□□ 0.4
ATG4D-209ENST00000588857 NPIPB5A8MRT5 1133 aa17.57■□□□□ 0.4
ATG4D-209ENST00000588857 ATP6V0E1O15342 81 aa17.57■□□□□ 0.4
ATG4D-209ENST00000588857 CTRB1P17538 263 aa17.57■□□□□ 0.4
ATG4D-209ENST00000588857 VWC2Q2TAL6 325 aa17.57■□□□□ 0.4
ATG4D-209ENST00000588857 CTRB2Q6GPI1 263 aa17.57■□□□□ 0.4
ATG4D-209ENST00000588857 OR1L6Q8NGR2 347 aa17.57■□□□□ 0.4
ATG4D-209ENST00000588857 WNT10AQ9GZT5 417 aa17.57■□□□□ 0.4
ATG4D-209ENST00000588857 UBQLN2Q9UHD9 624 aa17.57■□□□□ 0.4
ATG4D-209ENST00000588857 SMCO3A2RU48 225 aa17.56■□□□□ 0.4
ATG4D-209ENST00000588857 CORTO00230 105 aa17.56■□□□□ 0.4
ATG4D-209ENST00000588857 ASPHD1Q5U4P2 390 aa17.56■□□□□ 0.4
ATG4D-209ENST00000588857 TTC9CQ8N5M4 171 aa17.56■□□□□ 0.4
ATG4D-209ENST00000588857 MISP3Q96FF7 219 aa17.56■□□□□ 0.4
ATG4D-209ENST00000588857 CRYGCP07315 174 aa17.55■□□□□ 0.4
ATG4D-209ENST00000588857 GPX4P36969 197 aaPredicted RBP17.55■□□□□ 0.4
ATG4D-209ENST00000588857 UNQ5815/PRO19632Q6UWF5 114 aa17.55■□□□□ 0.4
ATG4D-209ENST00000588857 C19orf35Q6ZS72 473 aa17.55■□□□□ 0.4
ATG4D-209ENST00000588857 GNPNAT1Q96EK6 184 aaPredicted RBP17.55■□□□□ 0.4
ATG4D-209ENST00000588857 TMEM68Q96MH6 324 aa17.55■□□□□ 0.4
ATG4D-209ENST00000588857 PARD6GQ9BYG4 376 aaPredicted RBP17.55■□□□□ 0.4
ATG4D-209ENST00000588857 LINC01548A6NM66 108 aa17.54■□□□□ 0.4
ATG4D-209ENST00000588857 CYB5BO43169 146 aa17.54■□□□□ 0.4
ATG4D-209ENST00000588857 FBXO24O75426 580 aa17.54■□□□□ 0.4
ATG4D-209ENST00000588857 OPRK1P41145 380 aa17.54■□□□□ 0.4
ATG4D-209ENST00000588857 MFAP2P55001 183 aa17.54■□□□□ 0.4
ATG4D-209ENST00000588857 BLCAPP62952 87 aa17.54■□□□□ 0.4
ATG4D-209ENST00000588857 CD69Q07108 199 aa17.54■□□□□ 0.4
ATG4D-209ENST00000588857 ECSCRQ19T08 205 aa17.54■□□□□ 0.4
ATG4D-209ENST00000588857 PVRIGQ6DKI7 326 aa17.54■□□□□ 0.4
ATG4D-209ENST00000588857 SLC35E3Q7Z769 313 aa17.54■□□□□ 0.4
ATG4D-209ENST00000588857 SCARB1Q8WTV0 552 aa17.54■□□□□ 0.4
ATG4D-209ENST00000588857 TMED6Q8WW62 240 aa17.54■□□□□ 0.4
ATG4D-209ENST00000588857 CACNG8Q8WXS5 425 aa17.54■□□□□ 0.4
ATG4D-209ENST00000588857 WDR61Q9GZS3 305 aaKnown RBP17.54■□□□□ 0.4
ATG4D-209ENST00000588857 CDC42EP3Q9UKI2 254 aa17.54■□□□□ 0.4
ATG4D-209ENST00000588857 JMJD1CQ15652 2540 aa17.54■□□□□ 0.4
ATG4D-209ENST00000588857 FNDC10F2Z333 226 aa17.53■□□□□ 0.4
ATG4D-209ENST00000588857 IGHG2P01859 326 aa17.53■□□□□ 0.4
ATG4D-209ENST00000588857 ETFRF1Q6IPR1 90 aa17.53■□□□□ 0.4
ATG4D-209ENST00000588857 TMEM86BQ8N661 226 aa17.53■□□□□ 0.4
ATG4D-209ENST00000588857 OR5T1Q8NG75 326 aa17.53■□□□□ 0.4
ATG4D-209ENST00000588857 NPVFQ9HCQ7 196 aa17.53■□□□□ 0.4
ATG4D-209ENST00000588857 TSPAN9O75954 239 aa17.53■□□□□ 0.4
ATG4D-209ENST00000588857 SRD5A1P18405 259 aa17.53■□□□□ 0.4
ATG4D-209ENST00000588857 FGF7P21781 194 aa17.53■□□□□ 0.4
ATG4D-209ENST00000588857 ATP6V0CP27449 155 aa17.53■□□□□ 0.4
ATG4D-209ENST00000588857 AKR1C1Q04828 323 aa17.53■□□□□ 0.4
ATG4D-209ENST00000588857 AKIRIN2Q53H80 203 aa17.53■□□□□ 0.4
ATG4D-209ENST00000588857 ARSJQ5FYB0 599 aaPredicted RBP17.53■□□□□ 0.4
ATG4D-209ENST00000588857 SLC16A13Q7RTY0 426 aa17.53■□□□□ 0.4
ATG4D-209ENST00000588857 TAF15Q92804 592 aaKnown RBP eCLIP17.53■□□□□ 0.4
ATG4D-209ENST00000588857 SLC35E1Q96K37 410 aa17.53■□□□□ 0.4
ATG4D-209ENST00000588857 SLC25A32Q9H2D1 315 aa17.53■□□□□ 0.4
ATG4D-209ENST00000588857 RPS10-NUDT3A0A1W2PQS6 291 aa17.52■□□□□ 0.39
ATG4D-209ENST00000588857 SEC11BP0C7V7 166 aa17.52■□□□□ 0.39
ATG4D-209ENST00000588857 SPP1P10451 314 aa17.52■□□□□ 0.39
ATG4D-209ENST00000588857 RUNX1Q01196 453 aa17.52■□□□□ 0.39
ATG4D-209ENST00000588857 SH3BGRL3Q9H299 93 aa17.52■□□□□ 0.39
ATG4D-209ENST00000588857 WDR83OSQ9Y284 106 aa17.52■□□□□ 0.39
ATG4D-209ENST00000588857 MLANAQ16655 118 aa17.51■□□□□ 0.39
ATG4D-209ENST00000588857 BTNL8Q6UX41 500 aa17.51■□□□□ 0.39
ATG4D-209ENST00000588857 TREML4Q6UXN2 200 aa17.51■□□□□ 0.39
ATG4D-209ENST00000588857 PRIMA1Q86XR5 153 aa17.51■□□□□ 0.39
ATG4D-209ENST00000588857 FAM110DQ8TAY7 271 aaPredicted RBP17.51■□□□□ 0.39
ATG4D-209ENST00000588857 DMRT1Q9Y5R6 373 aa17.51■□□□□ 0.39
ATG4D-209ENST00000588857 TRAV41A0A0B4J266 112 aa17.5■□□□□ 0.39
ATG4D-209ENST00000588857 G3V318 75 aa17.5■□□□□ 0.39
ATG4D-209ENST00000588857 MPDU1O75352 247 aa17.5■□□□□ 0.39
ATG4D-209ENST00000588857 PRH1P02810 166 aa17.5■□□□□ 0.39
ATG4D-209ENST00000588857 IGF1P05019 195 aa17.5■□□□□ 0.39
ATG4D-209ENST00000588857 GAMTQ14353 236 aa17.5■□□□□ 0.39
ATG4D-209ENST00000588857 DUX5Q96PT3 197 aa17.5■□□□□ 0.39
ATG4D-209ENST00000588857 NPFFR1Q9GZQ6 430 aa17.5■□□□□ 0.39
ATG4D-209ENST00000588857 FNDC4Q9H6D8 234 aaPredicted RBP17.5■□□□□ 0.39
ATG4D-209ENST00000588857 CRIP2P52943 208 aaPredicted RBP17.49■□□□□ 0.39
ATG4D-209ENST00000588857 RAB14P61106 215 aa17.49■□□□□ 0.39
ATG4D-209ENST00000588857 FAM74A1Q5RGS3 127 aa17.49■□□□□ 0.39
ATG4D-209ENST00000588857 TEPPQ6URK8 271 aa17.49■□□□□ 0.39
ATG4D-209ENST00000588857 ZNF709Q8N972 641 aa17.49■□□□□ 0.39
ATG4D-209ENST00000588857 OR2G3Q8NGZ4 309 aa17.49■□□□□ 0.39
ATG4D-209ENST00000588857 THYN1Q9P016 225 aa17.49■□□□□ 0.39
ATG4D-209ENST00000588857 AP4M1O00189 453 aa17.49■□□□□ 0.39
ATG4D-209ENST00000588857 MT-CO2P00403 227 aa17.49■□□□□ 0.39
ATG4D-209ENST00000588857 MDKP21741 143 aaPredicted RBP17.49■□□□□ 0.39
ATG4D-209ENST00000588857 TMEM144Q7Z5S9 345 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms