RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 Q56UQ5 140 aa14.36□□□□□ -0.11
CCDC130-209ENST00000588809 RBPMS2Q6ZRY4 209 aaKnown RBP14.36□□□□□ -0.11
CCDC130-209ENST00000588809 UBAC2Q8NBM4 344 aa14.36□□□□□ -0.11
CCDC130-209ENST00000588809 MARCH1Q8TCQ1 289 aa14.36□□□□□ -0.11
CCDC130-209ENST00000588809 SPAG8Q99932 426 aaPredicted RBP14.36□□□□□ -0.11
CCDC130-209ENST00000588809 RYR2Q92736 4967 aa14.35□□□□□ -0.11
CCDC130-209ENST00000588809 TSPAN4O14817 238 aa14.35□□□□□ -0.11
CCDC130-209ENST00000588809 ERHP84090 104 aaKnown RBP14.35□□□□□ -0.11
CCDC130-209ENST00000588809 SURF2Q15527 256 aaPredicted RBP14.35□□□□□ -0.11
CCDC130-209ENST00000588809 MISP3Q96FF7 219 aa14.35□□□□□ -0.11
CCDC130-209ENST00000588809 NUPL2O15504 423 aaKnown RBP14.34□□□□□ -0.11
CCDC130-209ENST00000588809 ST8SIA3O43173 380 aa14.34□□□□□ -0.11
CCDC130-209ENST00000588809 MT-CO2P00403 227 aa14.34□□□□□ -0.11
CCDC130-209ENST00000588809 MFAP4P55083 255 aa14.34□□□□□ -0.11
CCDC130-209ENST00000588809 RELQ04864 619 aaPredicted RBP14.34□□□□□ -0.11
CCDC130-209ENST00000588809 PVRIGQ6DKI7 326 aa14.34□□□□□ -0.11
CCDC130-209ENST00000588809 FAAP20Q6NZ36 180 aa14.34□□□□□ -0.11
CCDC130-209ENST00000588809 DIRAS2Q96HU8 199 aa14.34□□□□□ -0.11
CCDC130-209ENST00000588809 OR10C1Q96KK4 312 aa14.34□□□□□ -0.11
CCDC130-209ENST00000588809 RETNQ9HD89 108 aa14.34□□□□□ -0.11
CCDC130-209ENST00000588809 CDS2O95674 445 aa14.33□□□□□ -0.12
CCDC130-209ENST00000588809 AKAIN1P0CW23 69 aa14.33□□□□□ -0.12
CCDC130-209ENST00000588809 RPL5P46777 297 aaKnown RBP14.33□□□□□ -0.12
CCDC130-209ENST00000588809 IL18Q14116 193 aa14.33□□□□□ -0.12
CCDC130-209ENST00000588809 TRIM16LQ309B1 348 aa14.33□□□□□ -0.12
CCDC130-209ENST00000588809 SP6Q3SY56 376 aa14.33□□□□□ -0.12
CCDC130-209ENST00000588809 AARDQ4LEZ3 155 aa14.33□□□□□ -0.12
CCDC130-209ENST00000588809 OR4C16Q8NGL9 310 aa14.33□□□□□ -0.12
CCDC130-209ENST00000588809 RTBDNQ9BSG5 229 aaPredicted RBP14.33□□□□□ -0.12
CCDC130-209ENST00000588809 C20orf24Q9BUV8 137 aa14.33□□□□□ -0.12
CCDC130-209ENST00000588809 SLIRPQ9GZT3 109 aaKnown RBP14.33□□□□□ -0.12
CCDC130-209ENST00000588809 NXF2Q9GZY0 626 aaKnown RBP14.33□□□□□ -0.12
CCDC130-209ENST00000588809 TMEM222Q9H0R3 208 aa14.33□□□□□ -0.12
CCDC130-209ENST00000588809 A0A0G2JRQ6 117 aa14.32□□□□□ -0.12
CCDC130-209ENST00000588809 DISC1C4P0D8 188 aa14.32□□□□□ -0.12
CCDC130-209ENST00000588809 H3BMQ9 156 aa14.32□□□□□ -0.12
CCDC130-209ENST00000588809 GSTZ1O43708 216 aaPredicted RBP14.32□□□□□ -0.12
CCDC130-209ENST00000588809 SPINK9Q5DT21 86 aa14.32□□□□□ -0.12
CCDC130-209ENST00000588809 FAM219AQ8IW50 185 aa14.32□□□□□ -0.12
CCDC130-209ENST00000588809 SLC35G3Q8N808 338 aa14.32□□□□□ -0.12
CCDC130-209ENST00000588809 GLYATL2Q8WU03 294 aa14.32□□□□□ -0.12
CCDC130-209ENST00000588809 C14orf166Q9Y224 244 aaKnown RBP14.32□□□□□ -0.12
CCDC130-209ENST00000588809 IGHV3OR16-8A0A075B7F1 116 aa14.31□□□□□ -0.12
CCDC130-209ENST00000588809 IFNA17P01571 189 aa14.31□□□□□ -0.12
CCDC130-209ENST00000588809 OR5AC1P0C628 307 aa14.31□□□□□ -0.12
CCDC130-209ENST00000588809 SNCAP37840 140 aa14.31□□□□□ -0.12
CCDC130-209ENST00000588809 LAMTOR1Q6IAA8 161 aa14.31□□□□□ -0.12
CCDC130-209ENST00000588809 RRNAD1Q96FB5 475 aaKnown RBP14.31□□□□□ -0.12
CCDC130-209ENST00000588809 PRRT1Q99946 306 aa14.31□□□□□ -0.12
CCDC130-209ENST00000588809 FAM110AQ9BQ89 295 aa14.31□□□□□ -0.12
CCDC130-209ENST00000588809 SOSTQ9BQB4 213 aa14.31□□□□□ -0.12
CCDC130-209ENST00000588809 PDCD10Q9BUL8 212 aa14.31□□□□□ -0.12
CCDC130-209ENST00000588809 GGTLC1Q9BX51 225 aa14.31□□□□□ -0.12
CCDC130-209ENST00000588809 SMPXQ9UHP9 88 aa14.31□□□□□ -0.12
CCDC130-209ENST00000588809 GPR132Q9UNW8 380 aa14.31□□□□□ -0.12
CCDC130-209ENST00000588809 LOC102724200A0A096LPH7 203 aaPredicted RBP14.3□□□□□ -0.12
CCDC130-209ENST00000588809 ANKRD20A5PA0PJZ0 165 aa14.3□□□□□ -0.12
CCDC130-209ENST00000588809 GNG7O60262 68 aa14.3□□□□□ -0.12
CCDC130-209ENST00000588809 IGHV3-48P01763 117 aa14.3□□□□□ -0.12
CCDC130-209ENST00000588809 BSXQ3C1V8 233 aa14.3□□□□□ -0.12
CCDC130-209ENST00000588809 Q6ZRM9 215 aa14.3□□□□□ -0.12
CCDC130-209ENST00000588809 LHFPL5Q8TAF8 219 aa14.3□□□□□ -0.12
CCDC130-209ENST00000588809 PINX1Q96BK5 328 aaKnown RBP14.3□□□□□ -0.12
CCDC130-209ENST00000588809 C6orf62Q9GZU0 229 aaPredicted RBP14.3□□□□□ -0.12
CCDC130-209ENST00000588809 NAA60Q9H7X0 242 aa14.3□□□□□ -0.12
CCDC130-209ENST00000588809 RSL24D1Q9UHA3 163 aaKnown RBP14.3□□□□□ -0.12
CCDC130-209ENST00000588809 DNAH1Q9P2D7 4330 aa14.3□□□□□ -0.12
CCDC130-209ENST00000588809 IGHV7-4-1A0A0J9YVY3 117 aa14.29□□□□□ -0.12
CCDC130-209ENST00000588809 TEX13DA0A0J9YY54 714 aaPredicted RBP14.29□□□□□ -0.12
CCDC130-209ENST00000588809 CRYM-AS1A6NIL9 109 aa14.29□□□□□ -0.12
CCDC130-209ENST00000588809 CORTO00230 105 aa14.29□□□□□ -0.12
CCDC130-209ENST00000588809 ZNF207O43670 478 aaKnown RBP14.29□□□□□ -0.12
CCDC130-209ENST00000588809 RNASE2P10153 161 aaKnown RBP14.29□□□□□ -0.12
CCDC130-209ENST00000588809 ODF3L2Q3SX64 289 aa14.29□□□□□ -0.12
CCDC130-209ENST00000588809 RBPMSQ93062 196 aaKnown RBP14.29□□□□□ -0.12
CCDC130-209ENST00000588809 OR4C46A6NHA9 309 aa14.28□□□□□ -0.12
CCDC130-209ENST00000588809 CHEK1O14757 476 aa14.28□□□□□ -0.12
CCDC130-209ENST00000588809 NOL3O60936 208 aaKnown RBP14.28□□□□□ -0.12
CCDC130-209ENST00000588809 ETV6P41212 452 aa14.28□□□□□ -0.12
CCDC130-209ENST00000588809 NPBWR1P48145 328 aa14.28□□□□□ -0.12
CCDC130-209ENST00000588809 SUB1P53999 127 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCDC130-209ENST00000588809 DHODHQ02127 395 aa14.28□□□□□ -0.12
CCDC130-209ENST00000588809 ZFAND6Q6FIF0 208 aa14.28□□□□□ -0.12
CCDC130-209ENST00000588809 DUSP18Q8NEJ0 188 aa14.28□□□□□ -0.12
CCDC130-209ENST00000588809 OR51S1Q8NGJ8 323 aa14.28□□□□□ -0.12
CCDC130-209ENST00000588809 OR52E5Q8NH55 327 aa14.28□□□□□ -0.12
CCDC130-209ENST00000588809 RNASE11Q8TAA1 199 aaKnown RBP14.28□□□□□ -0.12
CCDC130-209ENST00000588809 RNF2Q99496 336 aa14.28□□□□□ -0.12
CCDC130-209ENST00000588809 RHPN1-AS1Q9BWJ2 59 aa14.28□□□□□ -0.12
CCDC130-209ENST00000588809 YIF1AO95070 293 aa14.27□□□□□ -0.13
CCDC130-209ENST00000588809 TNFSF8P32971 234 aa14.27□□□□□ -0.13
CCDC130-209ENST00000588809 HOXA1P49639 335 aaPredicted RBP14.27□□□□□ -0.13
CCDC130-209ENST00000588809 SPCS3P61009 180 aa14.27□□□□□ -0.13
CCDC130-209ENST00000588809 SELENOHQ8IZQ5 122 aaKnown RBP14.27□□□□□ -0.13
CCDC130-209ENST00000588809 TMEM116Q8NCL8 245 aa14.27□□□□□ -0.13
CCDC130-209ENST00000588809 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.27□□□□□ -0.13
CCDC130-209ENST00000588809 TMEM56-RWDD3S4R434 201 aa14.27□□□□□ -0.13
CCDC130-209ENST00000588809 TRAV14DV4A0A0A6YYC5 116 aa14.26□□□□□ -0.13
CCDC130-209ENST00000588809 FAM90A2PQ658T7 463 aa14.26□□□□□ -0.13
CCDC130-209ENST00000588809 TOMM20LQ6UXN7 152 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms