RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 IFT46Q9NQC8 304 aa13.41□□□□□ -0.26
CCDC43-204ENST00000588687 AGRNO00468 2067 aa13.4□□□□□ -0.26
CCDC43-204ENST00000588687 LOC100506127A0A0U1RQW1 187 aa13.4□□□□□ -0.26
CCDC43-204ENST00000588687 GPR31O00270 319 aa13.4□□□□□ -0.26
CCDC43-204ENST00000588687 YIF1AO95070 293 aa13.4□□□□□ -0.26
CCDC43-204ENST00000588687 PMP2P02689 132 aa13.4□□□□□ -0.26
CCDC43-204ENST00000588687 MFAP4P55083 255 aa13.4□□□□□ -0.26
CCDC43-204ENST00000588687 PRCDQ00LT1 54 aa13.4□□□□□ -0.26
CCDC43-204ENST00000588687 MISP3Q96FF7 219 aa13.4□□□□□ -0.26
CCDC43-204ENST00000588687 TSC22D3Q99576 134 aa13.4□□□□□ -0.26
CCDC43-204ENST00000588687 MS4A6AQ9H2W1 248 aa13.4□□□□□ -0.26
CCDC43-204ENST00000588687 FAM212BQ9NTI7 297 aaPredicted RBP13.4□□□□□ -0.26
CCDC43-204ENST00000588687 FKBP11Q9NYL4 201 aa13.4□□□□□ -0.26
CCDC43-204ENST00000588687 TMEM127O75204 238 aa13.39□□□□□ -0.27
CCDC43-204ENST00000588687 IFNA4P05014 189 aa13.39□□□□□ -0.27
CCDC43-204ENST00000588687 TMEM187Q14656 261 aa13.39□□□□□ -0.27
CCDC43-204ENST00000588687 LEMD1Q68G75 181 aa13.39□□□□□ -0.27
CCDC43-204ENST00000588687 TOMM20LQ6UXN7 152 aa13.39□□□□□ -0.27
CCDC43-204ENST00000588687 CMTM1Q8IZ96 169 aa13.39□□□□□ -0.27
CCDC43-204ENST00000588687 HRH4Q9H3N8 390 aa13.39□□□□□ -0.27
CCDC43-204ENST00000588687 TRAV2A0A0B4J234 112 aa13.38□□□□□ -0.27
CCDC43-204ENST00000588687 TGFBR1P36897 503 aa13.38□□□□□ -0.27
CCDC43-204ENST00000588687 TAS2R46P59540 309 aa13.38□□□□□ -0.27
CCDC43-204ENST00000588687 TAS2R20P59543 309 aa13.38□□□□□ -0.27
CCDC43-204ENST00000588687 DEFB131AP59861 70 aa13.38□□□□□ -0.27
CCDC43-204ENST00000588687 LYSMD2Q8IV50 215 aa13.38□□□□□ -0.27
CCDC43-204ENST00000588687 OR5H2Q8NGV7 314 aa13.38□□□□□ -0.27
CCDC43-204ENST00000588687 GNG7O60262 68 aa13.37□□□□□ -0.27
CCDC43-204ENST00000588687 DFFBO76075 338 aa13.37□□□□□ -0.27
CCDC43-204ENST00000588687 RBMY1A1P0DJD3 496 aaKnown RBP13.37□□□□□ -0.27
CCDC43-204ENST00000588687 RBMY1CP0DJD4 496 aa13.37□□□□□ -0.27
CCDC43-204ENST00000588687 HRH1P35367 487 aa13.37□□□□□ -0.27
CCDC43-204ENST00000588687 RBMY1FQ15415 496 aaKnown RBP13.37□□□□□ -0.27
CCDC43-204ENST00000588687 PHLDA2Q53GA4 152 aa13.37□□□□□ -0.27
CCDC43-204ENST00000588687 UBE2NLQ5JXB2 153 aa13.37□□□□□ -0.27
CCDC43-204ENST00000588687 PVRIGQ6DKI7 326 aa13.37□□□□□ -0.27
CCDC43-204ENST00000588687 TSPAN14Q8NG11 270 aa13.37□□□□□ -0.27
CCDC43-204ENST00000588687 CMTM3Q96MX0 182 aa13.37□□□□□ -0.27
CCDC43-204ENST00000588687 GINS3Q9BRX5 216 aa13.37□□□□□ -0.27
CCDC43-204ENST00000588687 A0A1B0GU03 582 aa13.36□□□□□ -0.27
CCDC43-204ENST00000588687 CD5P06127 495 aa13.36□□□□□ -0.27
CCDC43-204ENST00000588687 C4BPBP20851 252 aa13.36□□□□□ -0.27
CCDC43-204ENST00000588687 TRPT1Q86TN4 253 aaKnown RBP13.36□□□□□ -0.27
CCDC43-204ENST00000588687 TBC1D26Q86UD7 250 aa13.36□□□□□ -0.27
CCDC43-204ENST00000588687 MRGPRFQ96AM1 343 aa13.36□□□□□ -0.27
CCDC43-204ENST00000588687 YTHDF1Q9BYJ9 559 aaKnown RBP13.36□□□□□ -0.27
CCDC43-204ENST00000588687 IGHV4-28A0A0C4DH34 117 aa13.35□□□□□ -0.27
CCDC43-204ENST00000588687 IGHV3-66A0A0C4DH42 116 aa13.35□□□□□ -0.27
CCDC43-204ENST00000588687 A0A1B0GVY2 172 aa13.35□□□□□ -0.27
CCDC43-204ENST00000588687 C11orf94C9JXX5 98 aa13.35□□□□□ -0.27
CCDC43-204ENST00000588687 ST8SIA3O43173 380 aa13.35□□□□□ -0.27
CCDC43-204ENST00000588687 HSPE1P61604 102 aaKnown RBP13.35□□□□□ -0.27
CCDC43-204ENST00000588687 PAFAH1B2P68402 229 aa13.35□□□□□ -0.27
CCDC43-204ENST00000588687 TMEM69Q5SWH9 247 aa13.35□□□□□ -0.27
CCDC43-204ENST00000588687 OR6F1Q8NGZ6 308 aa13.35□□□□□ -0.27
CCDC43-204ENST00000588687 PINX1Q96BK5 328 aaKnown RBP13.35□□□□□ -0.27
CCDC43-204ENST00000588687 S100A16Q96FQ6 103 aaKnown RBP13.35□□□□□ -0.27
CCDC43-204ENST00000588687 PUS1Q9Y606 427 aaKnown RBP eCLIP13.35□□□□□ -0.27
CCDC43-204ENST00000588687 X6R8D5 127 aa13.35□□□□□ -0.27
CCDC43-204ENST00000588687 ZNF705EA8MWA4 302 aaPredicted RBP13.34□□□□□ -0.27
CCDC43-204ENST00000588687 IGLL5B9A064 214 aa13.34□□□□□ -0.27
CCDC43-204ENST00000588687 INS-IGF2F8WCM5 200 aa13.34□□□□□ -0.27
CCDC43-204ENST00000588687 P0C879 139 aa13.34□□□□□ -0.27
CCDC43-204ENST00000588687 IZUMO4Q1ZYL8 232 aa13.34□□□□□ -0.27
CCDC43-204ENST00000588687 ZNF600Q6ZNG1 722 aa13.34□□□□□ -0.27
CCDC43-204ENST00000588687 Q6ZTC4 211 aa13.34□□□□□ -0.27
CCDC43-204ENST00000588687 MRPL36Q9P0J6 103 aaKnown RBP13.34□□□□□ -0.27
CCDC43-204ENST00000588687 K7EQG2 157 aa13.33□□□□□ -0.28
CCDC43-204ENST00000588687 HLA-DMAP28067 261 aa13.33□□□□□ -0.28
CCDC43-204ENST00000588687 NEDD8Q15843 81 aa13.33□□□□□ -0.28
CCDC43-204ENST00000588687 SPINK9Q5DT21 86 aa13.33□□□□□ -0.28
CCDC43-204ENST00000588687 H2BFWTQ7Z2G1 175 aa13.33□□□□□ -0.28
CCDC43-204ENST00000588687 SAMD12Q8N8I0 201 aa13.33□□□□□ -0.28
CCDC43-204ENST00000588687 OR4A16Q8NH70 328 aa13.33□□□□□ -0.28
CCDC43-204ENST00000588687 GPX8Q8TED1 209 aa13.33□□□□□ -0.28
CCDC43-204ENST00000588687 ELOA3CA0A087WX78 387 aaPredicted RBP13.32□□□□□ -0.28
CCDC43-204ENST00000588687 IGKV1-5P01602 117 aa13.32□□□□□ -0.28
CCDC43-204ENST00000588687 EIF4EP06730 217 aaKnown RBP13.32□□□□□ -0.28
CCDC43-204ENST00000588687 HLA-DMBP28068 263 aa13.32□□□□□ -0.28
CCDC43-204ENST00000588687 NPBWR1P48145 328 aa13.32□□□□□ -0.28
CCDC43-204ENST00000588687 CROCCP3Q8IVE0 287 aa13.32□□□□□ -0.28
CCDC43-204ENST00000588687 CSNK1G2-AS1Q8NCQ2 148 aa13.32□□□□□ -0.28
CCDC43-204ENST00000588687 DCANP1Q8TF63 244 aa13.32□□□□□ -0.28
CCDC43-204ENST00000588687 GRAMD2BQ96HH9 432 aa13.32□□□□□ -0.28
CCDC43-204ENST00000588687 DNASE2O00115 360 aaPredicted RBP13.31□□□□□ -0.28
CCDC43-204ENST00000588687 TMEM50AO95807 157 aa13.31□□□□□ -0.28
CCDC43-204ENST00000588687 MIFP14174 115 aa13.31□□□□□ -0.28
CCDC43-204ENST00000588687 PRSS3P35030 304 aa13.31□□□□□ -0.28
CCDC43-204ENST00000588687 RPS19P39019 145 aaKnown RBP13.31□□□□□ -0.28
CCDC43-204ENST00000588687 UCP3P55916 312 aa13.31□□□□□ -0.28
CCDC43-204ENST00000588687 STHQ8IWL8 128 aa13.31□□□□□ -0.28
CCDC43-204ENST00000588687 DUSP18Q8NEJ0 188 aa13.31□□□□□ -0.28
CCDC43-204ENST00000588687 FNDC4Q9H6D8 234 aaPredicted RBP13.31□□□□□ -0.28
CCDC43-204ENST00000588687 IGHV4-4A0A075B6R2 117 aa13.3□□□□□ -0.28
CCDC43-204ENST00000588687 A0A0B4J293 547 aa13.3□□□□□ -0.28
CCDC43-204ENST00000588687 RNASE2P10153 161 aaKnown RBP13.3□□□□□ -0.28
CCDC43-204ENST00000588687 SPP1P10451 314 aa13.3□□□□□ -0.28
CCDC43-204ENST00000588687 CRYBB3P26998 211 aa13.3□□□□□ -0.28
CCDC43-204ENST00000588687 ERHP84090 104 aaKnown RBP13.3□□□□□ -0.28
CCDC43-204ENST00000588687 TMEM41BQ5BJD5 291 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms