RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 TP53RKQ96S44 253 aa10.61□□□□□ -0.71
VMP1-206ENST00000587945 NXF2Q9GZY0 626 aaKnown RBP10.61□□□□□ -0.71
VMP1-206ENST00000587945 TP53TG1Q9Y2A0 90 aa10.61□□□□□ -0.71
VMP1-206ENST00000587945 A0A0B4J293 547 aa10.6□□□□□ -0.71
VMP1-206ENST00000587945 CXorf65A6NEN9 183 aa10.6□□□□□ -0.71
VMP1-206ENST00000587945 BMI1P35226 326 aa10.6□□□□□ -0.71
VMP1-206ENST00000587945 RND3P61587 244 aa10.6□□□□□ -0.71
VMP1-206ENST00000587945 CTF1Q16619 201 aa10.6□□□□□ -0.71
VMP1-206ENST00000587945 RNASE10Q5GAN6 216 aaKnown RBP10.6□□□□□ -0.71
VMP1-206ENST00000587945 LHFPL1Q86WI0 220 aa10.6□□□□□ -0.71
VMP1-206ENST00000587945 WFDC3Q8IUB2 231 aa10.6□□□□□ -0.71
VMP1-206ENST00000587945 GBGT1Q8N5D6 347 aa10.6□□□□□ -0.71
VMP1-206ENST00000587945 STPG3Q8N7X2 389 aa10.6□□□□□ -0.71
VMP1-206ENST00000587945 OR4D10Q8NGI6 311 aa10.6□□□□□ -0.71
VMP1-206ENST00000587945 OR10C1Q96KK4 312 aa10.6□□□□□ -0.71
VMP1-206ENST00000587945 ABHD1Q96SE0 405 aa10.6□□□□□ -0.71
VMP1-206ENST00000587945 TXN2Q99757 166 aa10.6□□□□□ -0.71
VMP1-206ENST00000587945 EXTL2Q9UBQ6 330 aa10.6□□□□□ -0.71
VMP1-206ENST00000587945 TRAV14DV4A0A0A6YYC5 116 aa10.59□□□□□ -0.71
VMP1-206ENST00000587945 KIR2DL5BA0A0G2JN68 375 aa10.59□□□□□ -0.71
VMP1-206ENST00000587945 KIR2DL5BA0A0G2JPC4 375 aa10.59□□□□□ -0.71
VMP1-206ENST00000587945 UBE2CO00762 179 aa10.59□□□□□ -0.71
VMP1-206ENST00000587945 ST8SIA3O43173 380 aa10.59□□□□□ -0.71
VMP1-206ENST00000587945 GNG7O60262 68 aa10.59□□□□□ -0.71
VMP1-206ENST00000587945 P0C879 139 aa10.59□□□□□ -0.71
VMP1-206ENST00000587945 SMIM18P0DKX4 95 aa10.59□□□□□ -0.71
VMP1-206ENST00000587945 PPP5CP53041 499 aa10.59□□□□□ -0.71
VMP1-206ENST00000587945 SP6Q3SY56 376 aa10.59□□□□□ -0.71
VMP1-206ENST00000587945 TOMM20LQ6UXN7 152 aa10.59□□□□□ -0.71
VMP1-206ENST00000587945 KIR2DL5AQ8N109 375 aa10.59□□□□□ -0.71
VMP1-206ENST00000587945 KIR2DL5BQ8NHK3 375 aa10.59□□□□□ -0.71
VMP1-206ENST00000587945 RNF183Q96D59 192 aa10.59□□□□□ -0.71
VMP1-206ENST00000587945 MTFP1Q9UDX5 166 aa10.59□□□□□ -0.71
VMP1-206ENST00000587945 IGHV3-66A0A0C4DH42 116 aa10.58□□□□□ -0.72
VMP1-206ENST00000587945 C3orf85A0A1B0GTC6 90 aa10.58□□□□□ -0.72
VMP1-206ENST00000587945 GABARAPO95166 117 aa10.58□□□□□ -0.72
VMP1-206ENST00000587945 IFNA17P01571 189 aa10.58□□□□□ -0.72
VMP1-206ENST00000587945 APOHP02749 345 aaPredicted RBP10.58□□□□□ -0.72
VMP1-206ENST00000587945 ZNF182P17025 639 aaPredicted RBP10.58□□□□□ -0.72
VMP1-206ENST00000587945 ETV6P41212 452 aa10.58□□□□□ -0.72
VMP1-206ENST00000587945 AKR1C2P52895 323 aa10.58□□□□□ -0.72
VMP1-206ENST00000587945 TNFRSF9Q07011 255 aa10.58□□□□□ -0.72
VMP1-206ENST00000587945 GPR107Q5VW38 600 aa10.58□□□□□ -0.72
VMP1-206ENST00000587945 FAM90A2PQ658T7 463 aa10.58□□□□□ -0.72
VMP1-206ENST00000587945 LILRB2Q8N423 598 aa10.58□□□□□ -0.72
VMP1-206ENST00000587945 AP3S1Q92572 193 aa10.58□□□□□ -0.72
VMP1-206ENST00000587945 GALNT14Q96FL9 552 aa10.58□□□□□ -0.72
VMP1-206ENST00000587945 ZNF486Q96H40 463 aaPredicted RBP10.58□□□□□ -0.72
VMP1-206ENST00000587945 MAP6D1Q9H9H5 199 aa10.58□□□□□ -0.72
VMP1-206ENST00000587945 A0A0G2JRQ6 117 aa10.57□□□□□ -0.72
VMP1-206ENST00000587945 SNCAP37840 140 aa10.57□□□□□ -0.72
VMP1-206ENST00000587945 TRIM16LQ309B1 348 aa10.57□□□□□ -0.72
VMP1-206ENST00000587945 SCGB2B2Q4G0G5 96 aa10.57□□□□□ -0.72
VMP1-206ENST00000587945 TCF24Q7RTU0 167 aa10.57□□□□□ -0.72
VMP1-206ENST00000587945 ARRDC1Q8N5I2 433 aa10.57□□□□□ -0.72
VMP1-206ENST00000587945 SLC35G3Q8N808 338 aa10.57□□□□□ -0.72
VMP1-206ENST00000587945 DUSP18Q8NEJ0 188 aa10.57□□□□□ -0.72
VMP1-206ENST00000587945 OR13C8Q8NGS7 320 aa10.57□□□□□ -0.72
VMP1-206ENST00000587945 ST8SIA2Q92186 375 aa10.57□□□□□ -0.72
VMP1-206ENST00000587945 MIXL1Q9H2W2 232 aa10.57□□□□□ -0.72
VMP1-206ENST00000587945 COPZ2Q9P299 210 aa10.57□□□□□ -0.72
VMP1-206ENST00000587945 PUS1Q9Y606 427 aaKnown RBP eCLIP10.57□□□□□ -0.72
VMP1-206ENST00000587945 RAB3DO95716 219 aa10.56□□□□□ -0.72
VMP1-206ENST00000587945 RNASE2P10153 161 aaKnown RBP10.56□□□□□ -0.72
VMP1-206ENST00000587945 NPBWR1P48145 328 aa10.56□□□□□ -0.72
VMP1-206ENST00000587945 HOXA1P49639 335 aaPredicted RBP10.56□□□□□ -0.72
VMP1-206ENST00000587945 MLANAQ16655 118 aa10.56□□□□□ -0.72
VMP1-206ENST00000587945 FAAP20Q6NZ36 180 aa10.56□□□□□ -0.72
VMP1-206ENST00000587945 TMEM229BQ8NBD8 167 aa10.56□□□□□ -0.72
VMP1-206ENST00000587945 TERB2Q8NHR7 220 aa10.56□□□□□ -0.72
VMP1-206ENST00000587945 MARCH1Q8TCQ1 289 aa10.56□□□□□ -0.72
VMP1-206ENST00000587945 LINC00476Q8WZB0 136 aa10.56□□□□□ -0.72
VMP1-206ENST00000587945 GINS3Q9BRX5 216 aa10.56□□□□□ -0.72
VMP1-206ENST00000587945 CSTL1Q9H114 145 aa10.56□□□□□ -0.72
VMP1-206ENST00000587945 MRPL36Q9P0J6 103 aaKnown RBP10.56□□□□□ -0.72
VMP1-206ENST00000587945 A0A1B0GU03 582 aa10.55□□□□□ -0.72
VMP1-206ENST00000587945 INS-IGF2F8WCM5 200 aa10.55□□□□□ -0.72
VMP1-206ENST00000587945 DFFBO76075 338 aa10.55□□□□□ -0.72
VMP1-206ENST00000587945 TMEM50AO95807 157 aa10.55□□□□□ -0.72
VMP1-206ENST00000587945 LY6G6CO95867 125 aa10.55□□□□□ -0.72
VMP1-206ENST00000587945 CD74P04233 296 aa10.55□□□□□ -0.72
VMP1-206ENST00000587945 TBPP20226 339 aa10.55□□□□□ -0.72
VMP1-206ENST00000587945 PVRIGQ6DKI7 326 aa10.55□□□□□ -0.72
VMP1-206ENST00000587945 STEAP1BQ6NZ63 245 aa10.55□□□□□ -0.72
VMP1-206ENST00000587945 CEMP1Q6PRD7 247 aaPredicted RBP10.55□□□□□ -0.72
VMP1-206ENST00000587945 ZNF600Q6ZNG1 722 aa10.55□□□□□ -0.72
VMP1-206ENST00000587945 Q6ZRM9 215 aa10.55□□□□□ -0.72
VMP1-206ENST00000587945 ZFAND1Q8TCF1 268 aa10.55□□□□□ -0.72
VMP1-206ENST00000587945 PDCD10Q9BUL8 212 aa10.55□□□□□ -0.72
VMP1-206ENST00000587945 C6orf62Q9GZU0 229 aaPredicted RBP10.55□□□□□ -0.72
VMP1-206ENST00000587945 FNDC4Q9H6D8 234 aaPredicted RBP10.55□□□□□ -0.72
VMP1-206ENST00000587945 VSIRQ9H7M9 311 aa10.55□□□□□ -0.72
VMP1-206ENST00000587945 ZFAND3Q9H8U3 227 aa10.55□□□□□ -0.72
VMP1-206ENST00000587945 NUPR2A6NF83 97 aa10.54□□□□□ -0.72
VMP1-206ENST00000587945 MPTX1A8MV57 137 aa10.54□□□□□ -0.72
VMP1-206ENST00000587945 CTDSP2O14595 271 aa10.54□□□□□ -0.72
VMP1-206ENST00000587945 ATG12O94817 140 aa10.54□□□□□ -0.72
VMP1-206ENST00000587945 UCP1P25874 307 aa10.54□□□□□ -0.72
VMP1-206ENST00000587945 CMC4P56277 68 aaPredicted RBP10.54□□□□□ -0.72
VMP1-206ENST00000587945 TAS2R19P59542 299 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms