RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 BOLA1Q9Y3E2 137 aa11.73□□□□□ -0.53
NFIX-208ENST00000587260 KANTRA0A1W2PQU2 76 aa11.72□□□□□ -0.53
NFIX-208ENST00000587260 G3V318 75 aa11.72□□□□□ -0.53
NFIX-208ENST00000587260 OR8U8P0C7N1 319 aa11.72□□□□□ -0.53
NFIX-208ENST00000587260 ARL16Q0P5N6 197 aa11.72□□□□□ -0.53
NFIX-208ENST00000587260 OR10P1Q8NGE3 313 aa11.72□□□□□ -0.53
NFIX-208ENST00000587260 OR1L6Q8NGR2 347 aa11.72□□□□□ -0.53
NFIX-208ENST00000587260 OR2T6Q8NHC8 308 aa11.72□□□□□ -0.53
NFIX-208ENST00000587260 PINX1Q96BK5 328 aaKnown RBP11.72□□□□□ -0.53
NFIX-208ENST00000587260 ARPC5LQ9BPX5 153 aa11.72□□□□□ -0.53
NFIX-208ENST00000587260 GGACTQ9BVM4 153 aa11.72□□□□□ -0.53
NFIX-208ENST00000587260 FBXL17Q9UF56 701 aa11.72□□□□□ -0.53
NFIX-208ENST00000587260 F11RQ9Y624 299 aaKnown RBP11.72□□□□□ -0.53
NFIX-208ENST00000587260 AP4M1O00189 453 aa11.71□□□□□ -0.53
NFIX-208ENST00000587260 ATP6V1FQ16864 119 aa11.71□□□□□ -0.53
NFIX-208ENST00000587260 C19orf54Q5BKX5 351 aa11.71□□□□□ -0.53
NFIX-208ENST00000587260 UNQ5815/PRO19632Q6UWF5 114 aa11.71□□□□□ -0.53
NFIX-208ENST00000587260 ETV3LQ6ZN32 361 aa11.71□□□□□ -0.53
NFIX-208ENST00000587260 C19orf35Q6ZS72 473 aa11.71□□□□□ -0.53
NFIX-208ENST00000587260 Q8N2B8 174 aa11.71□□□□□ -0.53
NFIX-208ENST00000587260 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.71□□□□□ -0.53
NFIX-208ENST00000587260 OR1S2Q8NGQ3 325 aa11.71□□□□□ -0.53
NFIX-208ENST00000587260 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.53
NFIX-208ENST00000587260 RNASEH2CQ8TDP1 164 aaKnown RBP11.71□□□□□ -0.53
NFIX-208ENST00000587260 CYTL1Q9NRR1 136 aa11.71□□□□□ -0.53
NFIX-208ENST00000587260 TRAV41A0A0B4J266 112 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 FBXO24O75426 580 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 TSPAN9O75954 239 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 IFNA4P05014 189 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 TMEM217Q8N7C4 229 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 WFDC1Q9HC57 220 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 PAIP2BQ9ULR5 123 aaKnown RBP11.7□□□□□ -0.54
NFIX-208ENST00000587260 JMJD1CQ15652 2540 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 FNDC10F2Z333 226 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 CORTO00230 105 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 DFFBO76075 338 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 GPX4P36969 197 aaPredicted RBP11.7□□□□□ -0.54
NFIX-208ENST00000587260 MFAP2P55001 183 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 SLC38A11Q08AI6 406 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 VWC2Q2TAL6 325 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 OR8G2PQ6IF36 304 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 SLC51BQ86UW2 128 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 FAM110DQ8TAY7 271 aaPredicted RBP11.7□□□□□ -0.54
NFIX-208ENST00000587260 CACNG8Q8WXS5 425 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 WNT10AQ9GZT5 417 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 SERTAD4Q9NUC0 356 aa11.7□□□□□ -0.54
NFIX-208ENST00000587260 JTBO76095 146 aa11.69□□□□□ -0.54
NFIX-208ENST00000587260 NDUFA7O95182 113 aa11.69□□□□□ -0.54
NFIX-208ENST00000587260 BRI3O95415 125 aa11.69□□□□□ -0.54
NFIX-208ENST00000587260 DLK1P80370 383 aa11.69□□□□□ -0.54
NFIX-208ENST00000587260 UBAC2Q8NBM4 344 aa11.69□□□□□ -0.54
NFIX-208ENST00000587260 OR5T1Q8NG75 326 aa11.69□□□□□ -0.54
NFIX-208ENST00000587260 STOML3Q8TAV4 291 aa11.69□□□□□ -0.54
NFIX-208ENST00000587260 ATP5SQ99766 215 aa11.69□□□□□ -0.54
NFIX-208ENST00000587260 GON7Q9BXV9 100 aa11.69□□□□□ -0.54
NFIX-208ENST00000587260 SMIM3Q9BZL3 60 aa11.69□□□□□ -0.54
NFIX-208ENST00000587260 DMRT1Q9Y5R6 373 aa11.69□□□□□ -0.54
NFIX-208ENST00000587260 MDKP21741 143 aaPredicted RBP11.68□□□□□ -0.54
NFIX-208ENST00000587260 CD69Q07108 199 aa11.68□□□□□ -0.54
NFIX-208ENST00000587260 ZNF266Q14584 549 aa11.68□□□□□ -0.54
NFIX-208ENST00000587260 C10orf99Q6UWK7 81 aa11.68□□□□□ -0.54
NFIX-208ENST00000587260 ZNF329Q86UD4 541 aa11.68□□□□□ -0.54
NFIX-208ENST00000587260 OR4F5Q8NH21 305 aa11.68□□□□□ -0.54
NFIX-208ENST00000587260 LINC01006Q8NI28 216 aa11.68□□□□□ -0.54
NFIX-208ENST00000587260 FANCD2OSQ96PS1 177 aa11.68□□□□□ -0.54
NFIX-208ENST00000587260 PARD6GQ9BYG4 376 aaPredicted RBP11.68□□□□□ -0.54
NFIX-208ENST00000587260 ARV1Q9H2C2 271 aa11.68□□□□□ -0.54
NFIX-208ENST00000587260 C16orf95Q9H693 158 aa11.68□□□□□ -0.54
NFIX-208ENST00000587260 IGLV11-55A0A075B6I3 123 aa11.67□□□□□ -0.54
NFIX-208ENST00000587260 CYB5BO43169 146 aa11.67□□□□□ -0.54
NFIX-208ENST00000587260 PRH1P02810 166 aa11.67□□□□□ -0.54
NFIX-208ENST00000587260 DEFA4P12838 97 aa11.67□□□□□ -0.54
NFIX-208ENST00000587260 EIF5AP63241 154 aaKnown RBP11.67□□□□□ -0.54
NFIX-208ENST00000587260 DEFA5Q01523 94 aa11.67□□□□□ -0.54
NFIX-208ENST00000587260 EXOSC2Q13868 293 aaKnown RBP11.67□□□□□ -0.54
NFIX-208ENST00000587260 CLINT1Q14677 625 aa11.67□□□□□ -0.54
NFIX-208ENST00000587260 RPL7L1Q6DKI1 246 aaKnown RBP11.67□□□□□ -0.54
NFIX-208ENST00000587260 LILRB2Q8N423 598 aa11.67□□□□□ -0.54
NFIX-208ENST00000587260 TMEM147Q9BVK8 224 aa11.67□□□□□ -0.54
NFIX-208ENST00000587260 ZNF471Q9BX82 626 aaPredicted RBP11.67□□□□□ -0.54
NFIX-208ENST00000587260 BORCS7-ASMTA0A0B4J1R7 106 aa11.66□□□□□ -0.54
NFIX-208ENST00000587260 PSMB11A5LHX3 300 aa11.66□□□□□ -0.54
NFIX-208ENST00000587260 SOX15O60248 233 aa11.66□□□□□ -0.54
NFIX-208ENST00000587260 HIST1H1BP16401 226 aaKnown RBP11.66□□□□□ -0.54
NFIX-208ENST00000587260 PPIFP30405 207 aaKnown RBP11.66□□□□□ -0.54
NFIX-208ENST00000587260 KRTAP24-1Q3LI83 254 aa11.66□□□□□ -0.54
NFIX-208ENST00000587260 ETFRF1Q6IPR1 90 aa11.66□□□□□ -0.54
NFIX-208ENST00000587260 SLC25A24Q6NUK1 477 aa11.66□□□□□ -0.54
NFIX-208ENST00000587260 KLHDC1Q8N7A1 406 aa11.66□□□□□ -0.54
NFIX-208ENST00000587260 FNDC4Q9H6D8 234 aaPredicted RBP11.66□□□□□ -0.54
NFIX-208ENST00000587260 ZNF355PQ9NSJ1 428 aa11.66□□□□□ -0.54
NFIX-208ENST00000587260 UQCC1Q9NVA1 299 aa11.66□□□□□ -0.54
NFIX-208ENST00000587260 TRBV9A0A0B4J1U6 114 aa11.65□□□□□ -0.54
NFIX-208ENST00000587260 H3BUA1 57 aa11.65□□□□□ -0.54
NFIX-208ENST00000587260 I3L2K1 104 aa11.65□□□□□ -0.54
NFIX-208ENST00000587260 HAX1O00165 279 aa11.65□□□□□ -0.54
NFIX-208ENST00000587260 TPT1P13693 172 aaKnown RBP11.65□□□□□ -0.54
NFIX-208ENST00000587260 CFHR3Q02985 330 aa11.65□□□□□ -0.54
NFIX-208ENST00000587260 CENPVQ7Z7K6 275 aaPredicted RBP11.65□□□□□ -0.54
NFIX-208ENST00000587260 NPVFQ9HCQ7 196 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms