RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 UBE2CO00762 179 aa12.62□□□□□ -0.39
TRIM47-203ENST00000586495 RGS5O15539 181 aa12.62□□□□□ -0.39
TRIM47-203ENST00000586495 B3GALNT1O75752 331 aa12.62□□□□□ -0.39
TRIM47-203ENST00000586495 RAB3DO95716 219 aa12.62□□□□□ -0.39
TRIM47-203ENST00000586495 IFNA17P01571 189 aa12.62□□□□□ -0.39
TRIM47-203ENST00000586495 IGKV1-5P01602 117 aa12.62□□□□□ -0.39
TRIM47-203ENST00000586495 CD74P04233 296 aa12.62□□□□□ -0.39
TRIM47-203ENST00000586495 CMC4P56277 68 aaPredicted RBP12.62□□□□□ -0.39
TRIM47-203ENST00000586495 MRPS10P82664 201 aaKnown RBP12.62□□□□□ -0.39
TRIM47-203ENST00000586495 SSBP1Q04837 148 aaKnown RBP12.62□□□□□ -0.39
TRIM47-203ENST00000586495 IZUMO4Q1ZYL8 232 aa12.62□□□□□ -0.39
TRIM47-203ENST00000586495 SCGB2B2Q4G0G5 96 aa12.62□□□□□ -0.39
TRIM47-203ENST00000586495 GPR141Q7Z602 305 aa12.62□□□□□ -0.39
TRIM47-203ENST00000586495 TMEM116Q8NCL8 245 aa12.62□□□□□ -0.39
TRIM47-203ENST00000586495 DUSP18Q8NEJ0 188 aa12.62□□□□□ -0.39
TRIM47-203ENST00000586495 OR10C1Q96KK4 312 aa12.62□□□□□ -0.39
TRIM47-203ENST00000586495 RHPN1-AS1Q9BWJ2 59 aa12.62□□□□□ -0.39
TRIM47-203ENST00000586495 TP53TG1Q9Y2A0 90 aa12.62□□□□□ -0.39
TRIM47-203ENST00000586495 CSMD3Q7Z407 3707 aa12.62□□□□□ -0.39
TRIM47-203ENST00000586495 TRAV14DV4A0A0A6YYC5 116 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 KIR2DL5BA0A0G2JN68 375 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 KIR2DL5BA0A0G2JPC4 375 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 INS-IGF2F8WCM5 200 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 GABARAPH6UMI1 98 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 CORTO00230 105 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 CHEK1O14757 476 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 BMI1P35226 326 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 SUB1P53999 127 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRIM47-203ENST00000586495 ODF3L2Q3SX64 289 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 SPINK9Q5DT21 86 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 STEAP1BQ6NZ63 245 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 Q6ZWC4 215 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 WFDC3Q8IUB2 231 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 KIR2DL5AQ8N109 375 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 KIR2DL5BQ8NHK3 375 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 RRNAD1Q96FB5 475 aaKnown RBP12.61□□□□□ -0.39
TRIM47-203ENST00000586495 RNF2Q99496 336 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 GINS3Q9BRX5 216 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 C6orf62Q9GZU0 229 aaPredicted RBP12.61□□□□□ -0.39
TRIM47-203ENST00000586495 ENY2Q9NPA8 101 aa12.61□□□□□ -0.39
TRIM47-203ENST00000586495 A0A0B4J293 547 aa12.6□□□□□ -0.39
TRIM47-203ENST00000586495 ST8SIA3O43173 380 aa12.6□□□□□ -0.39
TRIM47-203ENST00000586495 IGHV3-48P01763 117 aa12.6□□□□□ -0.39
TRIM47-203ENST00000586495 CD5P06127 495 aa12.6□□□□□ -0.39
TRIM47-203ENST00000586495 P0C879 139 aa12.6□□□□□ -0.39
TRIM47-203ENST00000586495 STPG3Q8N7X2 389 aa12.6□□□□□ -0.39
TRIM47-203ENST00000586495 OR4D10Q8NGI6 311 aa12.6□□□□□ -0.39
TRIM47-203ENST00000586495 OR13C8Q8NGS7 320 aa12.6□□□□□ -0.39
TRIM47-203ENST00000586495 RNASE11Q8TAA1 199 aaKnown RBP12.6□□□□□ -0.39
TRIM47-203ENST00000586495 GALNT14Q96FL9 552 aa12.6□□□□□ -0.39
TRIM47-203ENST00000586495 DYNC2H1Q8NCM8 4307 aaKnown RBP12.6□□□□□ -0.39
TRIM47-203ENST00000586495 LYSTQ99698 3801 aa12.59□□□□□ -0.39
TRIM47-203ENST00000586495 SPRY2O43597 315 aa12.59□□□□□ -0.39
TRIM47-203ENST00000586495 UCP1P25874 307 aa12.59□□□□□ -0.39
TRIM47-203ENST00000586495 HOXA1P49639 335 aaPredicted RBP12.59□□□□□ -0.39
TRIM47-203ENST00000586495 PAFAH1B2P68402 229 aa12.59□□□□□ -0.39
TRIM47-203ENST00000586495 MEF2DQ14814 521 aa12.59□□□□□ -0.39
TRIM47-203ENST00000586495 SP6Q3SY56 376 aa12.59□□□□□ -0.39
TRIM47-203ENST00000586495 MARCH1Q8TCQ1 289 aa12.59□□□□□ -0.39
TRIM47-203ENST00000586495 MIXL1Q9H2W2 232 aa12.59□□□□□ -0.39
TRIM47-203ENST00000586495 C14orf166Q9Y224 244 aaKnown RBP12.59□□□□□ -0.39
TRIM47-203ENST00000586495 RYR2Q92736 4967 aa12.59□□□□□ -0.39
TRIM47-203ENST00000586495 IGHV3-49A0A0A0MS15 119 aa12.58□□□□□ -0.4
TRIM47-203ENST00000586495 DISC1C4P0D8 188 aa12.58□□□□□ -0.4
TRIM47-203ENST00000586495 CTDSP2O14595 271 aa12.58□□□□□ -0.4
TRIM47-203ENST00000586495 ALDH3B2P48448 385 aa12.58□□□□□ -0.4
TRIM47-203ENST00000586495 ZNF600Q6ZNG1 722 aa12.58□□□□□ -0.4
TRIM47-203ENST00000586495 FAM219AQ8IW50 185 aa12.58□□□□□ -0.4
TRIM47-203ENST00000586495 ZNF414Q96IQ9 312 aa12.58□□□□□ -0.4
TRIM47-203ENST00000586495 RABL2AQ9UBK7 228 aaPredicted RBP12.58□□□□□ -0.4
TRIM47-203ENST00000586495 RABL2BQ9UNT1 228 aa12.58□□□□□ -0.4
TRIM47-203ENST00000586495 TEX13DA0A0J9YY54 714 aaPredicted RBP12.57□□□□□ -0.4
TRIM47-203ENST00000586495 SCGB2A1O75556 95 aa12.57□□□□□ -0.4
TRIM47-203ENST00000586495 RPL35AP18077 110 aaKnown RBP12.57□□□□□ -0.4
TRIM47-203ENST00000586495 ETV6P41212 452 aa12.57□□□□□ -0.4
TRIM47-203ENST00000586495 TFPI2P48307 235 aa12.57□□□□□ -0.4
TRIM47-203ENST00000586495 SURF2Q15527 256 aaPredicted RBP12.57□□□□□ -0.4
TRIM47-203ENST00000586495 DEFB135Q30KP9 77 aa12.57□□□□□ -0.4
TRIM47-203ENST00000586495 TOMM20LQ6UXN7 152 aa12.57□□□□□ -0.4
TRIM47-203ENST00000586495 SMIM4Q8WVI0 70 aa12.57□□□□□ -0.4
TRIM47-203ENST00000586495 IGKV3-7A0A075B6H7 116 aa12.56□□□□□ -0.4
TRIM47-203ENST00000586495 CDS2O95674 445 aa12.56□□□□□ -0.4
TRIM47-203ENST00000586495 TMEM50AO95807 157 aa12.56□□□□□ -0.4
TRIM47-203ENST00000586495 RNASE2P10153 161 aaKnown RBP12.56□□□□□ -0.4
TRIM47-203ENST00000586495 DHODHQ02127 395 aa12.56□□□□□ -0.4
TRIM47-203ENST00000586495 TNFRSF9Q07011 255 aa12.56□□□□□ -0.4
TRIM47-203ENST00000586495 IL18Q14116 193 aa12.56□□□□□ -0.4
TRIM47-203ENST00000586495 SPCS2Q15005 226 aa12.56□□□□□ -0.4
TRIM47-203ENST00000586495 FAM90A2PQ658T7 463 aa12.56□□□□□ -0.4
TRIM47-203ENST00000586495 PVRIGQ6DKI7 326 aa12.56□□□□□ -0.4
TRIM47-203ENST00000586495 RNF183Q96D59 192 aa12.56□□□□□ -0.4
TRIM47-203ENST00000586495 DIRAS2Q96HU8 199 aa12.56□□□□□ -0.4
TRIM47-203ENST00000586495 TMEM222Q9H0R3 208 aa12.56□□□□□ -0.4
TRIM47-203ENST00000586495 MAP6D1Q9H9H5 199 aa12.56□□□□□ -0.4
TRIM47-203ENST00000586495 PUS1Q9Y606 427 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRIM47-203ENST00000586495 IGHV3OR16-13A0A075B7E8 117 aa12.55□□□□□ -0.4
TRIM47-203ENST00000586495 IGHV3-74A0A0B4J1X5 117 aa12.55□□□□□ -0.4
TRIM47-203ENST00000586495 A0A0J9YWU9 116 aa12.55□□□□□ -0.4
TRIM47-203ENST00000586495 CTDSPLO15194 276 aa12.55□□□□□ -0.4
TRIM47-203ENST00000586495 OR5AC1P0C628 307 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms