RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 SPARTQ8N0X7 666 aa8.59□□□□□ -1.03
BRCA1-225ENST00000586385 ZNF114Q8NC26 417 aa8.59□□□□□ -1.03
BRCA1-225ENST00000586385 MISP3Q96FF7 219 aa8.59□□□□□ -1.03
BRCA1-225ENST00000586385 TXN2Q99757 166 aa8.59□□□□□ -1.03
BRCA1-225ENST00000586385 EHFQ9NZC4 300 aa8.59□□□□□ -1.03
BRCA1-225ENST00000586385 PRNDQ9UKY0 176 aa8.59□□□□□ -1.03
BRCA1-225ENST00000586385 CELA1Q9UNI1 258 aa8.59□□□□□ -1.03
BRCA1-225ENST00000586385 A0A0A6YYH2 397 aa8.58□□□□□ -1.04
BRCA1-225ENST00000586385 A0A1B0GU03 582 aa8.58□□□□□ -1.04
BRCA1-225ENST00000586385 A6NJ64 397 aa8.58□□□□□ -1.04
BRCA1-225ENST00000586385 ZNF705EA8MWA4 302 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-225ENST00000586385 SNAPC5O75971 98 aa8.58□□□□□ -1.04
BRCA1-225ENST00000586385 MED14OSP0DP75 135 aa8.58□□□□□ -1.04
BRCA1-225ENST00000586385 PSMB9P28065 219 aa8.58□□□□□ -1.04
BRCA1-225ENST00000586385 SCAND1P57086 179 aa8.58□□□□□ -1.04
BRCA1-225ENST00000586385 HERV-K104P61576 105 aa8.58□□□□□ -1.04
BRCA1-225ENST00000586385 IDNKQ5T6J7 187 aa8.58□□□□□ -1.04
BRCA1-225ENST00000586385 IZUMO2Q6UXV1 221 aa8.58□□□□□ -1.04
BRCA1-225ENST00000586385 SEC22AQ96IW7 307 aa8.58□□□□□ -1.04
BRCA1-225ENST00000586385 TMEM56Q96MV1 263 aa8.58□□□□□ -1.04
BRCA1-225ENST00000586385 ZNF2Q9BSG1 426 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-225ENST00000586385 MRPL36Q9P0J6 103 aaKnown RBP8.58□□□□□ -1.04
BRCA1-225ENST00000586385 TRAV2A0A0B4J234 112 aa8.57□□□□□ -1.04
BRCA1-225ENST00000586385 KNCNA6PVL3 124 aa8.57□□□□□ -1.04
BRCA1-225ENST00000586385 K7EQG2 157 aa8.57□□□□□ -1.04
BRCA1-225ENST00000586385 ST8SIA3O43173 380 aa8.57□□□□□ -1.04
BRCA1-225ENST00000586385 GABARAPL2P60520 117 aa8.57□□□□□ -1.04
BRCA1-225ENST00000586385 CSNK1G2-AS1Q8NCQ2 148 aa8.57□□□□□ -1.04
BRCA1-225ENST00000586385 CMTM3Q96MX0 182 aa8.57□□□□□ -1.04
BRCA1-225ENST00000586385 BLOC1S6Q9UL45 172 aa8.57□□□□□ -1.04
BRCA1-225ENST00000586385 PUS1Q9Y606 427 aaKnown RBP eCLIP8.57□□□□□ -1.04
BRCA1-225ENST00000586385 AGRNO00468 2067 aa8.57□□□□□ -1.04
BRCA1-225ENST00000586385 TRAV10A0A0B4J240 114 aa8.56□□□□□ -1.04
BRCA1-225ENST00000586385 GNG7O60262 68 aa8.56□□□□□ -1.04
BRCA1-225ENST00000586385 PMP2P02689 132 aa8.56□□□□□ -1.04
BRCA1-225ENST00000586385 NAT1P18440 290 aa8.56□□□□□ -1.04
BRCA1-225ENST00000586385 CBX5P45973 191 aa8.56□□□□□ -1.04
BRCA1-225ENST00000586385 PAFAH1B2P68402 229 aa8.56□□□□□ -1.04
BRCA1-225ENST00000586385 PRCDQ00LT1 54 aa8.56□□□□□ -1.04
BRCA1-225ENST00000586385 IZUMO4Q1ZYL8 232 aa8.56□□□□□ -1.04
BRCA1-225ENST00000586385 C12orf74Q32Q52 190 aa8.56□□□□□ -1.04
BRCA1-225ENST00000586385 PVRIGQ6DKI7 326 aa8.56□□□□□ -1.04
BRCA1-225ENST00000586385 ZNF767PQ75MW2 155 aa8.56□□□□□ -1.04
BRCA1-225ENST00000586385 PINX1Q96BK5 328 aaKnown RBP8.56□□□□□ -1.04
BRCA1-225ENST00000586385 RNF126Q9BV68 326 aa8.56□□□□□ -1.04
BRCA1-225ENST00000586385 CLEC5AQ9NY25 188 aa8.56□□□□□ -1.04
BRCA1-225ENST00000586385 FKBP11Q9NYL4 201 aa8.56□□□□□ -1.04
BRCA1-225ENST00000586385 SSR3Q9UNL2 185 aa8.56□□□□□ -1.04
BRCA1-225ENST00000586385 PKD1P98161 4303 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 PRSS29PA6NIE9 313 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 DNASE2O00115 360 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-225ENST00000586385 GPR31O00270 319 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 TMEM50AO95807 157 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 AMBPP02760 352 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 CD5P06127 495 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 MIFP14174 115 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 PHLDA2Q53GA4 152 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 SPINK9Q5DT21 86 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 ZNF600Q6ZNG1 722 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 LYSMD2Q8IV50 215 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 STHQ8IWL8 128 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 DUSP18Q8NEJ0 188 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 BORCS5Q969J3 196 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 GINS3Q9BRX5 216 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 DIABLOQ9NR28 239 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 MUC4Q99102 2169 aa8.55□□□□□ -1.04
BRCA1-225ENST00000586385 M0R2N4 97 aa8.54□□□□□ -1.04
BRCA1-225ENST00000586385 ZNF688P0C7X2 276 aa8.54□□□□□ -1.04
BRCA1-225ENST00000586385 TGFBR1P36897 503 aa8.54□□□□□ -1.04
BRCA1-225ENST00000586385 PPP5CP53041 499 aa8.54□□□□□ -1.04
BRCA1-225ENST00000586385 HSPE1P61604 102 aaKnown RBP8.54□□□□□ -1.04
BRCA1-225ENST00000586385 CMTM1Q8IZ96 169 aa8.54□□□□□ -1.04
BRCA1-225ENST00000586385 POM121L12Q8N7R1 296 aa8.54□□□□□ -1.04
BRCA1-225ENST00000586385 DCANP1Q8TF63 244 aa8.54□□□□□ -1.04
BRCA1-225ENST00000586385 MRGPRFQ96AM1 343 aa8.54□□□□□ -1.04
BRCA1-225ENST00000586385 GRAMD2BQ96HH9 432 aa8.54□□□□□ -1.04
BRCA1-225ENST00000586385 TSC22D3Q99576 134 aa8.54□□□□□ -1.04
BRCA1-225ENST00000586385 FNDC4Q9H6D8 234 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-225ENST00000586385 IFT46Q9NQC8 304 aa8.54□□□□□ -1.04
BRCA1-225ENST00000586385 RABAC1Q9UI14 185 aa8.54□□□□□ -1.04
BRCA1-225ENST00000586385 IGKV1-5P01602 117 aa8.53□□□□□ -1.04
BRCA1-225ENST00000586385 EIF4EP06730 217 aaKnown RBP8.53□□□□□ -1.04
BRCA1-225ENST00000586385 P0C879 139 aa8.53□□□□□ -1.04
BRCA1-225ENST00000586385 SPP1P10451 314 aa8.53□□□□□ -1.04
BRCA1-225ENST00000586385 CRYBB3P26998 211 aa8.53□□□□□ -1.04
BRCA1-225ENST00000586385 HRH1P35367 487 aa8.53□□□□□ -1.04
BRCA1-225ENST00000586385 HSPA13P48723 471 aa8.53□□□□□ -1.04
BRCA1-225ENST00000586385 TAS2R20P59543 309 aa8.53□□□□□ -1.04
BRCA1-225ENST00000586385 RPL11P62913 178 aaKnown RBP8.53□□□□□ -1.04
BRCA1-225ENST00000586385 MLANAQ16655 118 aa8.53□□□□□ -1.04
BRCA1-225ENST00000586385 MORN3Q6PF18 240 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-225ENST00000586385 TBC1D26Q86UD7 250 aa8.53□□□□□ -1.04
BRCA1-225ENST00000586385 STXBP6Q8NFX7 210 aa8.53□□□□□ -1.04
BRCA1-225ENST00000586385 TSPAN14Q8NG11 270 aa8.53□□□□□ -1.04
BRCA1-225ENST00000586385 OR5H2Q8NGV7 314 aa8.53□□□□□ -1.04
BRCA1-225ENST00000586385 FCGR1BQ92637 280 aa8.53□□□□□ -1.04
BRCA1-225ENST00000586385 FAM212BQ9NTI7 297 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-225ENST00000586385 DEFB131BA0A096LNP1 70 aa8.52□□□□□ -1.05
BRCA1-225ENST00000586385 LOC100506127A0A0U1RQW1 187 aa8.52□□□□□ -1.05
BRCA1-225ENST00000586385 IGKV1-17P01599 117 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms