RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 KLK9Q9UKQ9 250 aa10.6□□□□□ -0.71
VMP1-203ENST00000586245 NDUFB8O95169 186 aa10.59□□□□□ -0.71
VMP1-203ENST00000586245 MFAP2P55001 183 aa10.59□□□□□ -0.71
VMP1-203ENST00000586245 TAS2R30P59541 319 aa10.59□□□□□ -0.71
VMP1-203ENST00000586245 RAB11AP62491 216 aa10.59□□□□□ -0.71
VMP1-203ENST00000586245 C15orf32Q32M92 178 aa10.59□□□□□ -0.71
VMP1-203ENST00000586245 NSUN5P1Q3KNT7 163 aa10.59□□□□□ -0.71
VMP1-203ENST00000586245 LRRC37A5PQ49AS3 106 aa10.59□□□□□ -0.71
VMP1-203ENST00000586245 SMIM8Q96KF7 97 aa10.59□□□□□ -0.71
VMP1-203ENST00000586245 CXorf58Q96LI9 332 aa10.59□□□□□ -0.71
VMP1-203ENST00000586245 PSENENQ9NZ42 101 aa10.59□□□□□ -0.71
VMP1-203ENST00000586245 PAIP2BQ9ULR5 123 aaKnown RBP10.59□□□□□ -0.71
VMP1-203ENST00000586245 STRAPQ9Y3F4 350 aaKnown RBP10.59□□□□□ -0.71
VMP1-203ENST00000586245 DMRT1Q9Y5R6 373 aa10.59□□□□□ -0.71
VMP1-203ENST00000586245 COL6A5A8TX70 2615 aa10.59□□□□□ -0.71
VMP1-203ENST00000586245 IGHV3-11P01762 117 aa10.58□□□□□ -0.72
VMP1-203ENST00000586245 IFNA4P05014 189 aa10.58□□□□□ -0.72
VMP1-203ENST00000586245 OR8U8P0C7N1 319 aa10.58□□□□□ -0.72
VMP1-203ENST00000586245 PET100P0DJ07 73 aa10.58□□□□□ -0.72
VMP1-203ENST00000586245 EXOSC2Q13868 293 aaKnown RBP10.58□□□□□ -0.72
VMP1-203ENST00000586245 KIAA0141Q14154 515 aaPredicted RBP10.58□□□□□ -0.72
VMP1-203ENST00000586245 SPANXN5Q5MJ07 72 aa10.58□□□□□ -0.72
VMP1-203ENST00000586245 KLHL30-AS1Q8NEE0 82 aa10.58□□□□□ -0.72
VMP1-203ENST00000586245 PPP1R1CQ8WVI7 109 aa10.58□□□□□ -0.72
VMP1-203ENST00000586245 C4orf3Q8WVX3 66 aa10.58□□□□□ -0.72
VMP1-203ENST00000586245 ASB13Q8WXK3 278 aa10.58□□□□□ -0.72
VMP1-203ENST00000586245 EEF1AKMT3Q96AZ1 226 aa10.58□□□□□ -0.72
VMP1-203ENST00000586245 PINX1Q96BK5 328 aaKnown RBP10.58□□□□□ -0.72
VMP1-203ENST00000586245 OR5B12Q96R08 314 aa10.58□□□□□ -0.72
VMP1-203ENST00000586245 ZNF436Q9C0F3 470 aaPredicted RBP10.58□□□□□ -0.72
VMP1-203ENST00000586245 RPS10-NUDT3A0A1W2PQS6 291 aa10.57□□□□□ -0.72
VMP1-203ENST00000586245 H3BP45 60 aa10.57□□□□□ -0.72
VMP1-203ENST00000586245 MT-CO2P00403 227 aa10.57□□□□□ -0.72
VMP1-203ENST00000586245 GIPP09681 153 aaPredicted RBP10.57□□□□□ -0.72
VMP1-203ENST00000586245 PVRIGQ6DKI7 326 aa10.57□□□□□ -0.72
VMP1-203ENST00000586245 RNASEH2CQ8TDP1 164 aaKnown RBP10.57□□□□□ -0.72
VMP1-203ENST00000586245 VN1R17PQ8TDU5 208 aa10.57□□□□□ -0.72
VMP1-203ENST00000586245 GNB4Q9HAV0 340 aa10.57□□□□□ -0.72
VMP1-203ENST00000586245 TRBV7-1A0A0A6YYK4 115 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 IGHV3-21A0A0B4J1V1 117 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 MFSD2BA6NFX1 497 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 C15orf62A8K5M9 175 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 K7EIM0 57 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 TSC22D2O75157 780 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 DEDDO75618 318 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 LGALS1P09382 135 aaKnown RBP10.56□□□□□ -0.72
VMP1-203ENST00000586245 OPRK1P41145 380 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 BCAP31P51572 246 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 PAX9P55771 341 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 RAP2BP61225 183 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 FAM209BQ5JX69 171 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 ZNF343Q6P1L6 599 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 ETV3LQ6ZN32 361 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 C18orf65Q6ZTR6 163 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 TMEM170AQ8WVE7 144 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 WDR89Q96FK6 387 aaPredicted RBP10.56□□□□□ -0.72
VMP1-203ENST00000586245 OR4C12Q96R67 309 aa10.56□□□□□ -0.72
VMP1-203ENST00000586245 hCG_2014768A0A024R1R8 64 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 ADARB2-AS1A8MUL3 147 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 E5RGE8 158 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 I3L2K1 104 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 I3L521 148 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 MPC2O95563 127 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 TMEM50AO95807 157 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 IGHV3-23P01764 117 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 CAV2P51636 162 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 RUNX1Q01196 453 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 FGL1Q08830 312 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 ETFRF1Q6IPR1 90 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 C8orf86Q6ZUL3 223 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 SPATA3Q8NHX4 192 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 SCARB1Q8WTV0 552 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 C21orf62Q9NYP8 219 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 S4R3C0 116 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 ANK2Q01484 3957 aa10.55□□□□□ -0.72
VMP1-203ENST00000586245 TENM1Q9UKZ4 2725 aa10.54□□□□□ -0.72
VMP1-203ENST00000586245 ANKRD34BA5PLL1 514 aa10.54□□□□□ -0.72
VMP1-203ENST00000586245 M0QZ24 198 aa10.54□□□□□ -0.72
VMP1-203ENST00000586245 MFAP4P55083 255 aa10.54□□□□□ -0.72
VMP1-203ENST00000586245 Q56UQ5 140 aa10.54□□□□□ -0.72
VMP1-203ENST00000586245 ACSM6Q6P461 480 aa10.54□□□□□ -0.72
VMP1-203ENST00000586245 PRSS54Q6PEW0 395 aa10.54□□□□□ -0.72
VMP1-203ENST00000586245 TMEM14EPQ6UXP3 125 aa10.54□□□□□ -0.72
VMP1-203ENST00000586245 UBAC2Q8NBM4 344 aa10.54□□□□□ -0.72
VMP1-203ENST00000586245 OR4F17Q8NGA8 305 aa10.54□□□□□ -0.72
VMP1-203ENST00000586245 THAP6Q8TBB0 222 aa10.54□□□□□ -0.72
VMP1-203ENST00000586245 DPF1Q92782 380 aa10.54□□□□□ -0.72
VMP1-203ENST00000586245 OR4F4Q96R69 305 aa10.54□□□□□ -0.72
VMP1-203ENST00000586245 C11orf1Q9H5F2 150 aa10.54□□□□□ -0.72
VMP1-203ENST00000586245 GAR1Q9NY12 217 aaKnown RBP10.54□□□□□ -0.72
VMP1-203ENST00000586245 OR5AC2Q9NZP5 309 aa10.54□□□□□ -0.72
VMP1-203ENST00000586245 PEF1Q9UBV8 284 aaKnown RBP10.54□□□□□ -0.72
VMP1-203ENST00000586245 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.53□□□□□ -0.72
VMP1-203ENST00000586245 H0YIZ8 118 aa10.53□□□□□ -0.72
VMP1-203ENST00000586245 SCAF4O95104 1147 aaKnown RBP10.53□□□□□ -0.72
VMP1-203ENST00000586245 IGHV3-48P01763 117 aa10.53□□□□□ -0.72
VMP1-203ENST00000586245 HSPB1P04792 205 aaKnown RBP10.53□□□□□ -0.72
VMP1-203ENST00000586245 METTL15P1P0C7V9 234 aa10.53□□□□□ -0.72
VMP1-203ENST00000586245 SLC25A4P12235 298 aa10.53□□□□□ -0.72
VMP1-203ENST00000586245 GPX4P36969 197 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms