RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 IFNA4P05014 189 aa10.01□□□□□ -0.81
VMP1-202ENST00000585847 RNASE1P07998 156 aaKnown RBP10.01□□□□□ -0.81
VMP1-202ENST00000585847 METTL15P1P0C7V9 234 aa10.01□□□□□ -0.81
VMP1-202ENST00000585847 SERF2P84101 59 aa10.01□□□□□ -0.81
VMP1-202ENST00000585847 IFITM2Q01629 132 aa10.01□□□□□ -0.81
VMP1-202ENST00000585847 NHLH2Q02577 135 aa10.01□□□□□ -0.81
VMP1-202ENST00000585847 CLLU1Q5K131 121 aa10.01□□□□□ -0.81
VMP1-202ENST00000585847 RPL7L1Q6DKI1 246 aaKnown RBP10.01□□□□□ -0.81
VMP1-202ENST00000585847 RBMS3Q6XE24 437 aaKnown RBP10.01□□□□□ -0.81
VMP1-202ENST00000585847 TMEM219Q86XT9 240 aa10.01□□□□□ -0.81
VMP1-202ENST00000585847 RNF141Q8WVD5 230 aa10.01□□□□□ -0.81
VMP1-202ENST00000585847 ARPC1AQ92747 370 aa10.01□□□□□ -0.81
VMP1-202ENST00000585847 HINT2Q9BX68 163 aa10.01□□□□□ -0.81
VMP1-202ENST00000585847 FBXL15Q9H469 300 aa10.01□□□□□ -0.81
VMP1-202ENST00000585847 VPREB3Q9UKI3 123 aa10.01□□□□□ -0.81
VMP1-202ENST00000585847 FBXO7Q9Y3I1 522 aa10.01□□□□□ -0.81
VMP1-202ENST00000585847 IGLC7A0M8Q6 106 aa10□□□□□ -0.81
VMP1-202ENST00000585847 NCBP2LA6PVI3 153 aaKnown RBP10□□□□□ -0.81
VMP1-202ENST00000585847 PMS2P5A8MQ11 134 aa10□□□□□ -0.81
VMP1-202ENST00000585847 NPIPB5A8MRT5 1133 aa10□□□□□ -0.81
VMP1-202ENST00000585847 NUDT19A8MXV4 375 aa10□□□□□ -0.81
VMP1-202ENST00000585847 CA2P00918 260 aa10□□□□□ -0.81
VMP1-202ENST00000585847 MBP02144 154 aa10□□□□□ -0.81
VMP1-202ENST00000585847 AMY1AP04745 511 aa10□□□□□ -0.81
VMP1-202ENST00000585847 SPP1P10451 314 aa10□□□□□ -0.81
VMP1-202ENST00000585847 CRIP2P52943 208 aaPredicted RBP10□□□□□ -0.81
VMP1-202ENST00000585847 TMEM267Q0VDI3 215 aaPredicted RBP10□□□□□ -0.81
VMP1-202ENST00000585847 C12orf54Q6X4T0 127 aa10□□□□□ -0.81
VMP1-202ENST00000585847 TMEM217Q8N7C4 229 aa10□□□□□ -0.81
VMP1-202ENST00000585847 OR2G3Q8NGZ4 309 aa10□□□□□ -0.81
VMP1-202ENST00000585847 SAT2Q96F10 170 aaPredicted RBP10□□□□□ -0.81
VMP1-202ENST00000585847 THYN1Q9P016 225 aa10□□□□□ -0.81
VMP1-202ENST00000585847 BRI3O95415 125 aa9.99□□□□□ -0.81
VMP1-202ENST00000585847 CRYGCP07315 174 aa9.99□□□□□ -0.81
VMP1-202ENST00000585847 RNASE2P10153 161 aaKnown RBP9.99□□□□□ -0.81
VMP1-202ENST00000585847 HIST1H1BP16401 226 aaKnown RBP9.99□□□□□ -0.81
VMP1-202ENST00000585847 CNTFRP26992 372 aa9.99□□□□□ -0.81
VMP1-202ENST00000585847 CLINT1Q14677 625 aa9.99□□□□□ -0.81
VMP1-202ENST00000585847 FXYD3Q14802 87 aa9.99□□□□□ -0.81
VMP1-202ENST00000585847 MRGPRG-AS1Q2M3A8 158 aa9.99□□□□□ -0.81
VMP1-202ENST00000585847 KLK9Q2XQG4 91 aa9.99□□□□□ -0.81
VMP1-202ENST00000585847 CENPVQ7Z7K6 275 aaPredicted RBP9.99□□□□□ -0.81
VMP1-202ENST00000585847 ZNF709Q8N972 641 aa9.99□□□□□ -0.81
VMP1-202ENST00000585847 Q8N9W7 124 aa9.99□□□□□ -0.81
VMP1-202ENST00000585847 JMJD8Q96S16 334 aa9.99□□□□□ -0.81
VMP1-202ENST00000585847 SLC25A33Q9BSK2 321 aa9.99□□□□□ -0.81
VMP1-202ENST00000585847 WDR61Q9GZS3 305 aaKnown RBP9.99□□□□□ -0.81
VMP1-202ENST00000585847 MED9Q9NWA0 146 aa9.99□□□□□ -0.81
VMP1-202ENST00000585847 KLK9Q9UKQ9 250 aa9.99□□□□□ -0.81
VMP1-202ENST00000585847 WDR83OSQ9Y284 106 aa9.99□□□□□ -0.81
VMP1-202ENST00000585847 F11RQ9Y624 299 aaKnown RBP9.99□□□□□ -0.81
VMP1-202ENST00000585847 PLXNB1O43157 2135 aa9.98□□□□□ -0.81
VMP1-202ENST00000585847 FAM181BA6NEQ2 426 aa9.98□□□□□ -0.81
VMP1-202ENST00000585847 TEX22C9J3V5 150 aa9.98□□□□□ -0.81
VMP1-202ENST00000585847 PRSS46E5RG02 174 aa9.98□□□□□ -0.81
VMP1-202ENST00000585847 OR13C7P0DN81 318 aa9.98□□□□□ -0.81
VMP1-202ENST00000585847 CX3CL1P78423 397 aa9.98□□□□□ -0.81
VMP1-202ENST00000585847 BLOC1S1P78537 153 aa9.98□□□□□ -0.81
VMP1-202ENST00000585847 WT1-ASQ06250 92 aa9.98□□□□□ -0.81
VMP1-202ENST00000585847 HNF4GQ14541 408 aa9.98□□□□□ -0.81
VMP1-202ENST00000585847 OR8G2PQ6IF36 304 aa9.98□□□□□ -0.81
VMP1-202ENST00000585847 Q6ZS46 218 aa9.98□□□□□ -0.81
VMP1-202ENST00000585847 C5orf56Q8N8D9 126 aa9.98□□□□□ -0.81
VMP1-202ENST00000585847 SLC35E1Q96K37 410 aa9.98□□□□□ -0.81
VMP1-202ENST00000585847 ATP6V0BQ99437 205 aa9.98□□□□□ -0.81
VMP1-202ENST00000585847 NPVFQ9HCQ7 196 aa9.98□□□□□ -0.81
VMP1-202ENST00000585847 TEX46H3BTG2 121 aa9.97□□□□□ -0.81
VMP1-202ENST00000585847 H3BUA1 57 aa9.97□□□□□ -0.81
VMP1-202ENST00000585847 FABP1P07148 127 aa9.97□□□□□ -0.81
VMP1-202ENST00000585847 SULT1A2P50226 295 aa9.97□□□□□ -0.81
VMP1-202ENST00000585847 RPL15P61313 204 aaKnown RBP9.97□□□□□ -0.81
VMP1-202ENST00000585847 SELENOTP62341 195 aa9.97□□□□□ -0.81
VMP1-202ENST00000585847 GNB1P62873 340 aa9.97□□□□□ -0.81
VMP1-202ENST00000585847 CD69Q07108 199 aa9.97□□□□□ -0.81
VMP1-202ENST00000585847 AKIRIN2Q53H80 203 aa9.97□□□□□ -0.81
VMP1-202ENST00000585847 FAM209BQ5JX69 171 aa9.97□□□□□ -0.81
VMP1-202ENST00000585847 TEPPQ6URK8 271 aa9.97□□□□□ -0.81
VMP1-202ENST00000585847 TTC9CQ8N5M4 171 aa9.97□□□□□ -0.81
VMP1-202ENST00000585847 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.97□□□□□ -0.81
VMP1-202ENST00000585847 SGMS2Q8NHU3 365 aa9.97□□□□□ -0.81
VMP1-202ENST00000585847 ABHD5Q8WTS1 349 aa9.97□□□□□ -0.81
VMP1-202ENST00000585847 SMIM3Q9BZL3 60 aa9.97□□□□□ -0.81
VMP1-202ENST00000585847 TPSG1Q9NRR2 321 aa9.97□□□□□ -0.81
VMP1-202ENST00000585847 GAR1Q9NY12 217 aaKnown RBP9.97□□□□□ -0.81
VMP1-202ENST00000585847 SH2D7A6NKC9 451 aaPredicted RBP9.96□□□□□ -0.82
VMP1-202ENST00000585847 CGB1A6NKQ9 187 aa9.96□□□□□ -0.82
VMP1-202ENST00000585847 IGF1P05019 195 aa9.96□□□□□ -0.82
VMP1-202ENST00000585847 CTRB1P17538 263 aa9.96□□□□□ -0.82
VMP1-202ENST00000585847 MDKP21741 143 aaPredicted RBP9.96□□□□□ -0.82
VMP1-202ENST00000585847 BLCAPP62952 87 aa9.96□□□□□ -0.82
VMP1-202ENST00000585847 PJVKQ0ZLH3 352 aa9.96□□□□□ -0.82
VMP1-202ENST00000585847 SPINK9Q5DT21 86 aa9.96□□□□□ -0.82
VMP1-202ENST00000585847 CTRB2Q6GPI1 263 aa9.96□□□□□ -0.82
VMP1-202ENST00000585847 ALKAL2Q6UX46 152 aa9.96□□□□□ -0.82
VMP1-202ENST00000585847 Q6ZSV7 163 aa9.96□□□□□ -0.82
VMP1-202ENST00000585847 TMEM144Q7Z5S9 345 aa9.96□□□□□ -0.82
VMP1-202ENST00000585847 HAPLN4Q86UW8 402 aa9.96□□□□□ -0.82
VMP1-202ENST00000585847 TMED6Q8WW62 240 aa9.96□□□□□ -0.82
VMP1-202ENST00000585847 P2RX4Q99571 388 aa9.96□□□□□ -0.82
VMP1-202ENST00000585847 WFDC1Q9HC57 220 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms