RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 ZNF114Q8NC26 417 aa15.12■□□□□ 0.01
TOP3A-219ENST00000584887 KIR2DL5BQ8NHK3 375 aa15.12■□□□□ 0.01
TOP3A-219ENST00000584887 GALNT14Q96FL9 552 aa15.12■□□□□ 0.01
TOP3A-219ENST00000584887 ZNF414Q96IQ9 312 aa15.12■□□□□ 0.01
TOP3A-219ENST00000584887 TXN2Q99757 166 aa15.12■□□□□ 0.01
TOP3A-219ENST00000584887 NXF2Q9GZY0 626 aaKnown RBP15.12■□□□□ 0.01
TOP3A-219ENST00000584887 LYSTQ99698 3801 aa15.11■□□□□ 0.01
TOP3A-219ENST00000584887 TRAV14DV4A0A0A6YYC5 116 aa15.11■□□□□ 0.01
TOP3A-219ENST00000584887 SNCAP37840 140 aa15.11■□□□□ 0.01
TOP3A-219ENST00000584887 TNFRSF9Q07011 255 aa15.11■□□□□ 0.01
TOP3A-219ENST00000584887 ZNF124Q15973 351 aa15.11■□□□□ 0.01
TOP3A-219ENST00000584887 OR52I2Q8NH67 350 aa15.11■□□□□ 0.01
TOP3A-219ENST00000584887 RNF183Q96D59 192 aa15.11■□□□□ 0.01
TOP3A-219ENST00000584887 KLK11Q9UBX7 282 aa15.11■□□□□ 0.01
TOP3A-219ENST00000584887 DNAH1Q9P2D7 4330 aa15.11■□□□□ 0.01
TOP3A-219ENST00000584887 NUPR2A6NF83 97 aa15.1■□□□□ 0.01
TOP3A-219ENST00000584887 LY6G6CO95867 125 aa15.1■□□□□ 0.01
TOP3A-219ENST00000584887 IFNA17P01571 189 aa15.1■□□□□ 0.01
TOP3A-219ENST00000584887 IGKV1-5P01602 117 aa15.1■□□□□ 0.01
TOP3A-219ENST00000584887 CD3DP04234 171 aa15.1■□□□□ 0.01
TOP3A-219ENST00000584887 FCGR2BP31994 310 aaPredicted RBP15.1■□□□□ 0.01
TOP3A-219ENST00000584887 RND3P61587 244 aa15.1■□□□□ 0.01
TOP3A-219ENST00000584887 TRIM16LQ309B1 348 aa15.1■□□□□ 0.01
TOP3A-219ENST00000584887 RNASE11Q8TAA1 199 aaKnown RBP15.1■□□□□ 0.01
TOP3A-219ENST00000584887 LINC00476Q8WZB0 136 aa15.1■□□□□ 0.01
TOP3A-219ENST00000584887 AP3S1Q92572 193 aa15.1■□□□□ 0.01
TOP3A-219ENST00000584887 OR10C1Q96KK4 312 aa15.1■□□□□ 0.01
TOP3A-219ENST00000584887 TP53RKQ96S44 253 aa15.1■□□□□ 0.01
TOP3A-219ENST00000584887 GINS3Q9BRX5 216 aa15.1■□□□□ 0.01
TOP3A-219ENST00000584887 NAA50Q9GZZ1 169 aaKnown RBP15.1■□□□□ 0.01
TOP3A-219ENST00000584887 MAP6D1Q9H9H5 199 aa15.1■□□□□ 0.01
TOP3A-219ENST00000584887 EXTL2Q9UBQ6 330 aa15.1■□□□□ 0.01
TOP3A-219ENST00000584887 NPBWR1P48145 328 aa15.09■□□□□ 0.01
TOP3A-219ENST00000584887 HOXA1P49639 335 aaPredicted RBP15.09■□□□□ 0.01
TOP3A-219ENST00000584887 TCF24Q7RTU0 167 aa15.09■□□□□ 0.01
TOP3A-219ENST00000584887 DUSP18Q8NEJ0 188 aa15.09■□□□□ 0.01
TOP3A-219ENST00000584887 ZNF486Q96H40 463 aaPredicted RBP15.09■□□□□ 0.01
TOP3A-219ENST00000584887 PDCD10Q9BUL8 212 aa15.09■□□□□ 0.01
TOP3A-219ENST00000584887 COPZ2Q9P299 210 aa15.09■□□□□ 0.01
TOP3A-219ENST00000584887 IGHV3-66A0A0C4DH42 116 aa15.08■□□□□ 0
TOP3A-219ENST00000584887 ST8SIA3O43173 380 aa15.08■□□□□ 0
TOP3A-219ENST00000584887 ATG12O94817 140 aa15.08■□□□□ 0
TOP3A-219ENST00000584887 SCGB2B2Q4G0G5 96 aa15.08■□□□□ 0
TOP3A-219ENST00000584887 TOMM20LQ6UXN7 152 aa15.08■□□□□ 0
TOP3A-219ENST00000584887 ENY2Q9NPA8 101 aa15.08■□□□□ 0
TOP3A-219ENST00000584887 A0A0B4J293 547 aa15.07■□□□□ 0
TOP3A-219ENST00000584887 C3orf85A0A1B0GTC6 90 aa15.07■□□□□ 0
TOP3A-219ENST00000584887 CMC4P56277 68 aaPredicted RBP15.07■□□□□ 0
TOP3A-219ENST00000584887 RPL11P62913 178 aaKnown RBP15.07■□□□□ 0
TOP3A-219ENST00000584887 PAFAH1B2P68402 229 aa15.07■□□□□ 0
TOP3A-219ENST00000584887 SP6Q3SY56 376 aa15.07■□□□□ 0
TOP3A-219ENST00000584887 CEMP1Q6PRD7 247 aaPredicted RBP15.07■□□□□ 0
TOP3A-219ENST00000584887 LHFPL1Q86WI0 220 aa15.07■□□□□ 0
TOP3A-219ENST00000584887 ARRDC1Q8N5I2 433 aa15.07■□□□□ 0
TOP3A-219ENST00000584887 TMEM217Q8N7C4 229 aa15.07■□□□□ 0
TOP3A-219ENST00000584887 CCDC71LQ8N9Z2 235 aa15.07■□□□□ 0
TOP3A-219ENST00000584887 ST8SIA2Q92186 375 aa15.07■□□□□ 0
TOP3A-219ENST00000584887 MTFP1Q9UDX5 166 aa15.07■□□□□ 0
TOP3A-219ENST00000584887 PUS1Q9Y606 427 aaKnown RBP eCLIP15.07■□□□□ 0
TOP3A-219ENST00000584887 MPTX1A8MV57 137 aa15.06■□□□□ 0
TOP3A-219ENST00000584887 DNASE2O00115 360 aaPredicted RBP15.06■□□□□ 0
TOP3A-219ENST00000584887 ZNF182P17025 639 aaPredicted RBP15.06■□□□□ 0
TOP3A-219ENST00000584887 TBPP20226 339 aa15.06■□□□□ 0
TOP3A-219ENST00000584887 ETV6P41212 452 aa15.06■□□□□ 0
TOP3A-219ENST00000584887 ZNF600Q6ZNG1 722 aa15.06■□□□□ 0
TOP3A-219ENST00000584887 OR4D10Q8NGI6 311 aa15.06■□□□□ 0
TOP3A-219ENST00000584887 OR13C8Q8NGS7 320 aa15.06■□□□□ 0
TOP3A-219ENST00000584887 ZFAND1Q8TCF1 268 aa15.06■□□□□ 0
TOP3A-219ENST00000584887 RRNAD1Q96FB5 475 aaKnown RBP15.06■□□□□ 0
TOP3A-219ENST00000584887 CSTL1Q9H114 145 aa15.06■□□□□ 0
TOP3A-219ENST00000584887 ALMS1Q8TCU4 4167 aa15.06■□□□□ 0
TOP3A-219ENST00000584887 GABARAPO95166 117 aa15.05■□□□□ -0
TOP3A-219ENST00000584887 RAB3DO95716 219 aa15.05■□□□□ -0
TOP3A-219ENST00000584887 APOHP02749 345 aaPredicted RBP15.05■□□□□ -0
TOP3A-219ENST00000584887 P0C879 139 aa15.05■□□□□ -0
TOP3A-219ENST00000584887 SUB1P53999 127 aaKnown RBP eCLIP15.05■□□□□ -0
TOP3A-219ENST00000584887 CTF1Q16619 201 aa15.05■□□□□ -0
TOP3A-219ENST00000584887 GPR107Q5VW38 600 aa15.05■□□□□ -0
TOP3A-219ENST00000584887 FAM90A2PQ658T7 463 aa15.05■□□□□ -0
TOP3A-219ENST00000584887 ABHD1Q96SE0 405 aa15.05■□□□□ -0
TOP3A-219ENST00000584887 KLK5Q9Y337 293 aaPredicted RBP15.05■□□□□ -0
TOP3A-219ENST00000584887 EPPK1P58107 5090 aaKnown RBP15.05■□□□□ -0
TOP3A-219ENST00000584887 RNASE2P10153 161 aaKnown RBP15.04■□□□□ -0
TOP3A-219ENST00000584887 TERB2Q8NHR7 220 aa15.04■□□□□ -0
TOP3A-219ENST00000584887 MARCH1Q8TCQ1 289 aa15.04■□□□□ -0
TOP3A-219ENST00000584887 BIRC6Q9NR09 4857 aa15.03■□□□□ -0
TOP3A-219ENST00000584887 CORTO00230 105 aa15.03■□□□□ -0
TOP3A-219ENST00000584887 DFFBO76075 338 aa15.03■□□□□ -0
TOP3A-219ENST00000584887 SMIM18P0DKX4 95 aa15.03■□□□□ -0
TOP3A-219ENST00000584887 OPRK1P41145 380 aa15.03■□□□□ -0
TOP3A-219ENST00000584887 TAS2R19P59542 299 aa15.03■□□□□ -0
TOP3A-219ENST00000584887 LEMD1Q68G75 181 aa15.03■□□□□ -0
TOP3A-219ENST00000584887 LILRB2Q8N423 598 aa15.03■□□□□ -0
TOP3A-219ENST00000584887 TMEM229BQ8NBD8 167 aa15.03■□□□□ -0
TOP3A-219ENST00000584887 C15orf40Q8WUR7 153 aa15.03■□□□□ -0
TOP3A-219ENST00000584887 RARRES2Q99969 163 aa15.03■□□□□ -0
TOP3A-219ENST00000584887 MS4A6AQ9H2W1 248 aa15.03■□□□□ -0
TOP3A-219ENST00000584887 VSIRQ9H7M9 311 aa15.03■□□□□ -0
TOP3A-219ENST00000584887 ZFAND3Q9H8U3 227 aa15.03■□□□□ -0
TOP3A-219ENST00000584887 RABAC1Q9UI14 185 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms