RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 CD5LO43866 347 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 FGF7P21781 194 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 SERF2P84101 59 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 BTNL8Q6UX41 500 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 TMEM219Q86XT9 240 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 HSPB9Q9BQS6 159 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 NPCDR1Q9BY65 106 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 FBXO7Q9Y3I1 522 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 DMRT1Q9Y5R6 373 aa11.06□□□□□ -0.64
UBBP4-202ENST00000584755 MDFIC2A0A1B0GVS7 189 aa11.05□□□□□ -0.64
UBBP4-202ENST00000584755 M0QZK8 103 aa11.05□□□□□ -0.64
UBBP4-202ENST00000584755 CORTO00230 105 aa11.05□□□□□ -0.64
UBBP4-202ENST00000584755 APELAP0DMC3 54 aa11.05□□□□□ -0.64
UBBP4-202ENST00000584755 KLK9Q2XQG4 91 aa11.05□□□□□ -0.64
UBBP4-202ENST00000584755 TMEM182Q6ZP80 229 aaPredicted RBP11.05□□□□□ -0.64
UBBP4-202ENST00000584755 TMEM144Q7Z5S9 345 aa11.05□□□□□ -0.64
UBBP4-202ENST00000584755 SLC7A5P1Q8MH63 180 aa11.05□□□□□ -0.64
UBBP4-202ENST00000584755 TTC9CQ8N5M4 171 aa11.05□□□□□ -0.64
UBBP4-202ENST00000584755 OR1L6Q8NGR2 347 aa11.05□□□□□ -0.64
UBBP4-202ENST00000584755 ABHD5Q8WTS1 349 aa11.05□□□□□ -0.64
UBBP4-202ENST00000584755 FAM103A1Q9BTL3 118 aaKnown RBP11.05□□□□□ -0.64
UBBP4-202ENST00000584755 FNDC4Q9H6D8 234 aaPredicted RBP11.05□□□□□ -0.64
UBBP4-202ENST00000584755 KLK9Q9UKQ9 250 aa11.05□□□□□ -0.64
UBBP4-202ENST00000584755 ZFHX3Q15911 3703 aa11.04□□□□□ -0.64
UBBP4-202ENST00000584755 ZNF705EA8MWA4 302 aaPredicted RBP11.04□□□□□ -0.64
UBBP4-202ENST00000584755 SOX15O60248 233 aa11.04□□□□□ -0.64
UBBP4-202ENST00000584755 TSPAN9O75954 239 aa11.04□□□□□ -0.64
UBBP4-202ENST00000584755 IER3P46695 156 aa11.04□□□□□ -0.64
UBBP4-202ENST00000584755 CRIP2P52943 208 aaPredicted RBP11.04□□□□□ -0.64
UBBP4-202ENST00000584755 BLOC1S1P78537 153 aa11.04□□□□□ -0.64
UBBP4-202ENST00000584755 GAMTQ14353 236 aa11.04□□□□□ -0.64
UBBP4-202ENST00000584755 C19orf35Q6ZS72 473 aa11.04□□□□□ -0.64
UBBP4-202ENST00000584755 SLC16A13Q7RTY0 426 aa11.04□□□□□ -0.64
UBBP4-202ENST00000584755 SGMS2Q8NHU3 365 aa11.04□□□□□ -0.64
UBBP4-202ENST00000584755 CXorf58Q96LI9 332 aa11.04□□□□□ -0.64
UBBP4-202ENST00000584755 WNT10AQ9GZT5 417 aa11.04□□□□□ -0.64
UBBP4-202ENST00000584755 PARP11Q9NR21 331 aa11.04□□□□□ -0.64
UBBP4-202ENST00000584755 SMCO3A2RU48 225 aa11.03□□□□□ -0.64
UBBP4-202ENST00000584755 LY6EQ16553 131 aa11.03□□□□□ -0.64
UBBP4-202ENST00000584755 MLANAQ16655 118 aa11.03□□□□□ -0.64
UBBP4-202ENST00000584755 TEPPQ6URK8 271 aa11.03□□□□□ -0.64
UBBP4-202ENST00000584755 DPPA3Q6W0C5 159 aa11.03□□□□□ -0.64
UBBP4-202ENST00000584755 Q6YL49 198 aa11.03□□□□□ -0.64
UBBP4-202ENST00000584755 OR5R1Q8NH85 324 aa11.03□□□□□ -0.64
UBBP4-202ENST00000584755 LYPD6BQ8NI32 183 aa11.03□□□□□ -0.64
UBBP4-202ENST00000584755 TMEM68Q96MH6 324 aa11.03□□□□□ -0.64
UBBP4-202ENST00000584755 ZNF48Q96MX3 618 aaPredicted RBP11.03□□□□□ -0.64
UBBP4-202ENST00000584755 MGST2Q99735 147 aa11.03□□□□□ -0.64
UBBP4-202ENST00000584755 C17orf112F2Z3M2 114 aa11.02□□□□□ -0.65
UBBP4-202ENST00000584755 ATP6V1G1O75348 118 aa11.02□□□□□ -0.65
UBBP4-202ENST00000584755 OPRK1P41145 380 aa11.02□□□□□ -0.65
UBBP4-202ENST00000584755 AKR1C8PQ5T2L2 129 aa11.02□□□□□ -0.65
UBBP4-202ENST00000584755 ETFRF1Q6IPR1 90 aa11.02□□□□□ -0.65
UBBP4-202ENST00000584755 ZNF709Q8N972 641 aa11.02□□□□□ -0.65
UBBP4-202ENST00000584755 LFNGQ8NES3 379 aa11.02□□□□□ -0.65
UBBP4-202ENST00000584755 C22orf15Q8WYQ4 148 aa11.02□□□□□ -0.65
UBBP4-202ENST00000584755 SLC35E1Q96K37 410 aa11.02□□□□□ -0.65
UBBP4-202ENST00000584755 GGTLC1Q9BX51 225 aa11.02□□□□□ -0.65
UBBP4-202ENST00000584755 MYO9AB2RTY4 2548 aa11.02□□□□□ -0.65
UBBP4-202ENST00000584755 IGLV11-55A0A075B6I3 123 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 IGKV1OR2-108A0A075B7D4 117 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 I3L2K1 104 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 ATP6V0E1O15342 81 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 IGHV4-59P01825 116 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 CAMLGP49069 296 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 FHITP49789 147 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 AKR1C1Q04828 323 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 AKIRIN2Q53H80 203 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 C19orf54Q5BKX5 351 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 PXDC1Q5TGL8 231 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 ACSM6Q6P461 480 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 Q6ZRG5 221 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 THAP8Q8NA92 274 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 TMEM116Q8NCL8 245 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 OR2T6Q8NHC8 308 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 FANCD2OSQ96PS1 177 aa11.01□□□□□ -0.65
UBBP4-202ENST00000584755 AGPAT2O15120 278 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 IGHG2P01859 326 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 PRH1P02810 166 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 DEFA4P12838 97 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 RPL29P47914 159 aaKnown RBP11□□□□□ -0.65
UBBP4-202ENST00000584755 RAB31Q13636 194 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 TMEM41BQ5BJD5 291 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 FAM110DQ8TAY7 271 aaPredicted RBP11□□□□□ -0.65
UBBP4-202ENST00000584755 MISP3Q96FF7 219 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 VSIRQ9H7M9 311 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 KCNIP2Q9NS61 270 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 RPRMQ9NS64 109 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 MRPL36Q9P0J6 103 aaKnown RBP11□□□□□ -0.65
UBBP4-202ENST00000584755 SLC45A2Q9UMX9 530 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 MXRA5Q9NR99 2828 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 SH2D7A6NKC9 451 aaPredicted RBP11□□□□□ -0.65
UBBP4-202ENST00000584755 LINC01548A6NM66 108 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 K7EIM0 57 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 MT-CO2P00403 227 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 MBP02144 154 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 IGF1P05019 195 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 PRR20EP86478 221 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 PRR20CP86479 221 aa11□□□□□ -0.65
UBBP4-202ENST00000584755 PRR20DP86480 221 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms