RNA–Protein interactions for RNA: ENST00000584734.1

LINC01887-202, Transcript of long intergenic non-protein coding RNA 1887, humanhuman

TSL 3 BASIC

Gene LINC01887, Length 860 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01887-202ENST00000584734 SNCAP37840 140 aa11.21□□□□□ -0.61
LINC01887-202ENST00000584734 RORCP51449 518 aa11.21□□□□□ -0.61
LINC01887-202ENST00000584734 UCP3P55916 312 aa11.21□□□□□ -0.61
LINC01887-202ENST00000584734 CMC4P56277 68 aaPredicted RBP11.21□□□□□ -0.61
LINC01887-202ENST00000584734 HSPE1P61604 102 aaKnown RBP11.21□□□□□ -0.61
LINC01887-202ENST00000584734 PRCDQ00LT1 54 aa11.21□□□□□ -0.61
LINC01887-202ENST00000584734 RNASE12Q5GAN4 147 aaKnown RBP11.21□□□□□ -0.61
LINC01887-202ENST00000584734 WFDC3Q8IUB2 231 aa11.21□□□□□ -0.61
LINC01887-202ENST00000584734 KIR2DL5AQ8N109 375 aa11.21□□□□□ -0.61
LINC01887-202ENST00000584734 KIR2DL5BQ8NHK3 375 aa11.21□□□□□ -0.61
LINC01887-202ENST00000584734 GALNT14Q96FL9 552 aa11.21□□□□□ -0.61
LINC01887-202ENST00000584734 RNF2Q99496 336 aa11.21□□□□□ -0.61
LINC01887-202ENST00000584734 DNAH1Q9P2D7 4330 aa11.21□□□□□ -0.62
LINC01887-202ENST00000584734 TRAV14DV4A0A0A6YYC5 116 aa11.2□□□□□ -0.62
LINC01887-202ENST00000584734 CHEK1O14757 476 aa11.2□□□□□ -0.62
LINC01887-202ENST00000584734 LY6G6CO95867 125 aa11.2□□□□□ -0.62
LINC01887-202ENST00000584734 IGKV1-39P01597 117 aa11.2□□□□□ -0.62
LINC01887-202ENST00000584734 IGKV1D-39P04432 117 aa11.2□□□□□ -0.62
LINC01887-202ENST00000584734 TNFRSF9Q07011 255 aa11.2□□□□□ -0.62
LINC01887-202ENST00000584734 SPINK9Q5DT21 86 aa11.2□□□□□ -0.62
LINC01887-202ENST00000584734 RNASE10Q5GAN6 216 aaKnown RBP11.2□□□□□ -0.62
LINC01887-202ENST00000584734 MZT2AQ6P582 158 aa11.2□□□□□ -0.62
LINC01887-202ENST00000584734 APRG1Q8IVJ8 170 aa11.2□□□□□ -0.62
LINC01887-202ENST00000584734 TMEM217Q8N7C4 229 aa11.2□□□□□ -0.62
LINC01887-202ENST00000584734 RNF183Q96D59 192 aa11.2□□□□□ -0.62
LINC01887-202ENST00000584734 NXF2Q9GZY0 626 aaKnown RBP11.2□□□□□ -0.62
LINC01887-202ENST00000584734 IGHV3OR16-13A0A075B7E8 117 aa11.19□□□□□ -0.62
LINC01887-202ENST00000584734 IGHV3-74A0A0B4J1X5 117 aa11.19□□□□□ -0.62
LINC01887-202ENST00000584734 NUPR2A6NF83 97 aa11.19□□□□□ -0.62
LINC01887-202ENST00000584734 H3BMQ9 156 aa11.19□□□□□ -0.62
LINC01887-202ENST00000584734 IFNA17P01571 189 aa11.19□□□□□ -0.62
LINC01887-202ENST00000584734 PI3P19957 117 aa11.19□□□□□ -0.62
LINC01887-202ENST00000584734 PAFAH1B2P68402 229 aa11.19□□□□□ -0.62
LINC01887-202ENST00000584734 IZUMO4Q1ZYL8 232 aa11.19□□□□□ -0.62
LINC01887-202ENST00000584734 GBGT1Q8N5D6 347 aa11.19□□□□□ -0.62
LINC01887-202ENST00000584734 ZNF114Q8NC26 417 aa11.19□□□□□ -0.62
LINC01887-202ENST00000584734 GINS3Q9BRX5 216 aa11.19□□□□□ -0.62
LINC01887-202ENST00000584734 NAA50Q9GZZ1 169 aaKnown RBP11.19□□□□□ -0.62
LINC01887-202ENST00000584734 MAP6D1Q9H9H5 199 aa11.19□□□□□ -0.62
LINC01887-202ENST00000584734 ATG12O94817 140 aa11.18□□□□□ -0.62
LINC01887-202ENST00000584734 FCGR2BP31994 310 aaPredicted RBP11.18□□□□□ -0.62
LINC01887-202ENST00000584734 NPBWR1P48145 328 aa11.18□□□□□ -0.62
LINC01887-202ENST00000584734 AKR1C2P52895 323 aa11.18□□□□□ -0.62
LINC01887-202ENST00000584734 PIGPP57054 158 aa11.18□□□□□ -0.62
LINC01887-202ENST00000584734 RPL11P62913 178 aaKnown RBP11.18□□□□□ -0.62
LINC01887-202ENST00000584734 EWSR1Q01844 656 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC01887-202ENST00000584734 CEMP1Q6PRD7 247 aaPredicted RBP11.18□□□□□ -0.62
LINC01887-202ENST00000584734 SLC35G3Q8N808 338 aa11.18□□□□□ -0.62
LINC01887-202ENST00000584734 DUSP18Q8NEJ0 188 aa11.18□□□□□ -0.62
LINC01887-202ENST00000584734 AP3S1Q92572 193 aa11.18□□□□□ -0.62
LINC01887-202ENST00000584734 OR10C1Q96KK4 312 aa11.18□□□□□ -0.62
LINC01887-202ENST00000584734 PDCD10Q9BUL8 212 aa11.18□□□□□ -0.62
LINC01887-202ENST00000584734 KLK11Q9UBX7 282 aa11.18□□□□□ -0.62
LINC01887-202ENST00000584734 KLK5Q9Y337 293 aaPredicted RBP11.18□□□□□ -0.62
LINC01887-202ENST00000584734 PLECQ15149 4684 aaKnown RBP11.17□□□□□ -0.62
LINC01887-202ENST00000584734 RND3P61587 244 aa11.17□□□□□ -0.62
LINC01887-202ENST00000584734 TRIM16LQ309B1 348 aa11.17□□□□□ -0.62
LINC01887-202ENST00000584734 TCF24Q7RTU0 167 aa11.17□□□□□ -0.62
LINC01887-202ENST00000584734 RNASE11Q8TAA1 199 aaKnown RBP11.17□□□□□ -0.62
LINC01887-202ENST00000584734 LINC00476Q8WZB0 136 aa11.17□□□□□ -0.62
LINC01887-202ENST00000584734 ZNF486Q96H40 463 aaPredicted RBP11.17□□□□□ -0.62
LINC01887-202ENST00000584734 CSTL1Q9H114 145 aa11.17□□□□□ -0.62
LINC01887-202ENST00000584734 ENY2Q9NPA8 101 aa11.17□□□□□ -0.62
LINC01887-202ENST00000584734 C3orf85A0A1B0GTC6 90 aa11.16□□□□□ -0.62
LINC01887-202ENST00000584734 MPTX1A8MV57 137 aa11.16□□□□□ -0.62
LINC01887-202ENST00000584734 DNASE2O00115 360 aaPredicted RBP11.16□□□□□ -0.62
LINC01887-202ENST00000584734 IGKV1-5P01602 117 aa11.16□□□□□ -0.62
LINC01887-202ENST00000584734 CD3DP04234 171 aa11.16□□□□□ -0.62
LINC01887-202ENST00000584734 CD5P06127 495 aa11.16□□□□□ -0.62
LINC01887-202ENST00000584734 PPP5CP53041 499 aa11.16□□□□□ -0.62
LINC01887-202ENST00000584734 SUB1P53999 127 aaKnown RBP eCLIP11.16□□□□□ -0.62
LINC01887-202ENST00000584734 ZNF124Q15973 351 aa11.16□□□□□ -0.62
LINC01887-202ENST00000584734 TOMM20LQ6UXN7 152 aa11.16□□□□□ -0.62
LINC01887-202ENST00000584734 OR52I2Q8NH67 350 aa11.16□□□□□ -0.62
LINC01887-202ENST00000584734 ZFAND1Q8TCF1 268 aa11.16□□□□□ -0.62
LINC01887-202ENST00000584734 RRNAD1Q96FB5 475 aaKnown RBP11.16□□□□□ -0.62
LINC01887-202ENST00000584734 TP53RKQ96S44 253 aa11.16□□□□□ -0.62
LINC01887-202ENST00000584734 COPZ2Q9P299 210 aa11.16□□□□□ -0.62
LINC01887-202ENST00000584734 EXTL2Q9UBQ6 330 aa11.16□□□□□ -0.62
LINC01887-202ENST00000584734 A0A0B4J293 547 aa11.15□□□□□ -0.62
LINC01887-202ENST00000584734 IGHV3-66A0A0C4DH42 116 aa11.15□□□□□ -0.62
LINC01887-202ENST00000584734 ST8SIA3O43173 380 aa11.15□□□□□ -0.62
LINC01887-202ENST00000584734 TBPP20226 339 aa11.15□□□□□ -0.62
LINC01887-202ENST00000584734 ETV6P41212 452 aa11.15□□□□□ -0.62
LINC01887-202ENST00000584734 HOXA1P49639 335 aaPredicted RBP11.15□□□□□ -0.62
LINC01887-202ENST00000584734 SP6Q3SY56 376 aa11.15□□□□□ -0.62
LINC01887-202ENST00000584734 SCGB2B2Q4G0G5 96 aa11.15□□□□□ -0.62
LINC01887-202ENST00000584734 ZNF600Q6ZNG1 722 aa11.15□□□□□ -0.62
LINC01887-202ENST00000584734 ARRDC1Q8N5I2 433 aa11.15□□□□□ -0.62
LINC01887-202ENST00000584734 CCDC71LQ8N9Z2 235 aa11.15□□□□□ -0.62
LINC01887-202ENST00000584734 PUS1Q9Y606 427 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC01887-202ENST00000584734 CORTO00230 105 aa11.14□□□□□ -0.63
LINC01887-202ENST00000584734 ZNF182P17025 639 aaPredicted RBP11.14□□□□□ -0.63
LINC01887-202ENST00000584734 ATF4P18848 351 aaPredicted RBP11.14□□□□□ -0.63
LINC01887-202ENST00000584734 SPCS2Q15005 226 aa11.14□□□□□ -0.63
LINC01887-202ENST00000584734 FAM90A2PQ658T7 463 aa11.14□□□□□ -0.63
LINC01887-202ENST00000584734 TERB2Q8NHR7 220 aa11.14□□□□□ -0.63
LINC01887-202ENST00000584734 DYNC2LI1Q8TCX1 351 aa11.14□□□□□ -0.63
LINC01887-202ENST00000584734 C15orf40Q8WUR7 153 aa11.14□□□□□ -0.63
LINC01887-202ENST00000584734 GATAD1Q8WUU5 269 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms