RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 MMD2Q8IY49 270 aa9.83□□□□□ -0.84
ERBB2-218ENST00000584450 MRPL18Q9H0U6 180 aaKnown RBP9.83□□□□□ -0.84
ERBB2-218ENST00000584450 Q9UFV3 132 aa9.83□□□□□ -0.84
ERBB2-218ENST00000584450 AMMECR1Q9Y4X0 333 aaPredicted RBP9.83□□□□□ -0.84
ERBB2-218ENST00000584450 DPRXA6NFQ7 191 aa9.83□□□□□ -0.84
ERBB2-218ENST00000584450 C15orf61A6NNL5 157 aa9.83□□□□□ -0.84
ERBB2-218ENST00000584450 MBNL2Q5VZF2 373 aaKnown RBP9.83□□□□□ -0.84
ERBB2-218ENST00000584450 Q8NFD4 153 aa9.83□□□□□ -0.84
ERBB2-218ENST00000584450 MGST2Q99735 147 aa9.83□□□□□ -0.84
ERBB2-218ENST00000584450 VAMP8Q9BV40 100 aa9.83□□□□□ -0.84
ERBB2-218ENST00000584450 IGHV3OR16-13A0A075B7E8 117 aa9.83□□□□□ -0.84
ERBB2-218ENST00000584450 IGHV3-74A0A0B4J1X5 117 aa9.83□□□□□ -0.84
ERBB2-218ENST00000584450 K7EQM0 130 aa9.83□□□□□ -0.84
ERBB2-218ENST00000584450 COL8A1P27658 744 aa9.83□□□□□ -0.84
ERBB2-218ENST00000584450 ARL2-SNX15V9GYD0 113 aa9.83□□□□□ -0.84
ERBB2-218ENST00000584450 A0A087WWC5 75 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 DLL1O00548 723 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 UBE2CO00762 179 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 GFRA3O60609 400 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 TCTAP57738 103 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 IFI27L2Q9H2X8 130 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 CHD3Q12873 2000 aaKnown RBP9.82□□□□□ -0.84
ERBB2-218ENST00000584450 HSBP1L1C9JCN9 74 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 HYPMO75409 117 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 IGHV3-23P01764 117 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 CSN1S1P47710 185 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 RELBQ01201 579 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 KRTAP27-1Q3LI81 207 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 PYY3Q5JQD4 70 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 ETFRF1Q6IPR1 90 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 PRNTQ86SH4 94 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 GSX1Q9H4S2 264 aaPredicted RBP9.82□□□□□ -0.84
ERBB2-218ENST00000584450 CCDC168Q8NDH2 2452 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 MGAQ8IWI9 3026 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 A0A1B0GUS0 222 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 J3KRW8 73 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 C10orf91Q5T1B1 145 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 ATOH7Q8N100 152 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 ZNF430Q9H8G1 570 aaPredicted RBP9.82□□□□□ -0.84
ERBB2-218ENST00000584450 RPUSD1Q9UJJ7 312 aaKnown RBP9.82□□□□□ -0.84
ERBB2-218ENST00000584450 FAM215AQ9Y5M1 114 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 TLN2Q9Y4G6 2542 aa9.82□□□□□ -0.84
ERBB2-218ENST00000584450 IGHV3OR16-10A0A075B7F0 116 aa9.81□□□□□ -0.84
ERBB2-218ENST00000584450 MBD3L4A6NDZ8 208 aaPredicted RBP9.81□□□□□ -0.84
ERBB2-218ENST00000584450 MBD3L3A6NE82 208 aaPredicted RBP9.81□□□□□ -0.84
ERBB2-218ENST00000584450 MBD3L5A6NJ08 208 aaPredicted RBP9.81□□□□□ -0.84
ERBB2-218ENST00000584450 UPK2O00526 184 aa9.81□□□□□ -0.84
ERBB2-218ENST00000584450 LINC00305Q7Z4B0 112 aa9.81□□□□□ -0.84
ERBB2-218ENST00000584450 MBD3L2Q8NHZ7 208 aaPredicted RBP9.81□□□□□ -0.84
ERBB2-218ENST00000584450 TANC2Q9HCD6 1990 aa9.81□□□□□ -0.84
ERBB2-218ENST00000584450 GNG5P63218 68 aa9.81□□□□□ -0.84
ERBB2-218ENST00000584450 ECSCRQ19T08 205 aa9.81□□□□□ -0.84
ERBB2-218ENST00000584450 Q6ZS92 163 aa9.81□□□□□ -0.84
ERBB2-218ENST00000584450 SPACA3Q8IXA5 215 aa9.81□□□□□ -0.84
ERBB2-218ENST00000584450 OR4F17Q8NGA8 305 aa9.81□□□□□ -0.84
ERBB2-218ENST00000584450 ZNF785A8K8V0 405 aa9.81□□□□□ -0.84
ERBB2-218ENST00000584450 RNASE6Q93091 150 aaKnown RBP9.81□□□□□ -0.84
ERBB2-218ENST00000584450 NOL4LQ96MY1 436 aaPredicted RBP9.81□□□□□ -0.84
ERBB2-218ENST00000584450 SETD2Q9BYW2 2564 aaPredicted RBP9.81□□□□□ -0.84
ERBB2-218ENST00000584450 TRAV1-1A0A0B4J248 108 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 TEX50A0A1B0GTY4 177 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 NPIPB11E5RHQ5 1161 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 LMO1P25800 156 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 TIMP3P35625 211 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 SRP14P37108 136 aaKnown RBP9.8□□□□□ -0.84
ERBB2-218ENST00000584450 FOXA3P55318 350 aaPredicted RBP9.8□□□□□ -0.84
ERBB2-218ENST00000584450 MSMPQ1L6U9 139 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 TMEM200BQ69YZ2 307 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 PERPQ96FX8 193 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 DKK4Q9UBT3 224 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 LINC00312Q9Y6C7 94 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 FREM2Q5SZK8 3169 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 MYO9AB2RTY4 2548 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 MUC21A0A0G2JKD1 596 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 MUC21A0A140T8X8 626 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 P01737 135 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 SRIP30626 198 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 MC5RP33032 325 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 MUC21Q5SSG8 566 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 LINC00479Q96M42 142 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 CLEC3BP05452 202 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 ADIPOQQ15848 244 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 ASCL5Q7RTU5 278 aa9.8□□□□□ -0.84
ERBB2-218ENST00000584450 UTF1Q5T230 341 aa9.79□□□□□ -0.84
ERBB2-218ENST00000584450 C19orf35Q6ZS72 473 aa9.79□□□□□ -0.84
ERBB2-218ENST00000584450 TMEM144Q7Z5S9 345 aa9.79□□□□□ -0.84
ERBB2-218ENST00000584450 LINC01551Q86U37 167 aa9.79□□□□□ -0.84
ERBB2-218ENST00000584450 IGFBPL1Q8WX77 278 aa9.79□□□□□ -0.84
ERBB2-218ENST00000584450 TMEM186Q96B77 213 aa9.79□□□□□ -0.84
ERBB2-218ENST00000584450 GAFA1Q96PS6 74 aa9.79□□□□□ -0.84
ERBB2-218ENST00000584450 DIRC2Q96SL1 478 aa9.79□□□□□ -0.84
ERBB2-218ENST00000584450 CBLN4Q9NTU7 201 aa9.79□□□□□ -0.84
ERBB2-218ENST00000584450 RAXQ9Y2V3 346 aa9.79□□□□□ -0.84
ERBB2-218ENST00000584450 DYSFO75923 2080 aa9.79□□□□□ -0.84
ERBB2-218ENST00000584450 CGB1A6NKQ9 187 aa9.79□□□□□ -0.84
ERBB2-218ENST00000584450 DDTP30046 118 aa9.79□□□□□ -0.84
ERBB2-218ENST00000584450 APOBEC3AP31941 199 aaPredicted RBP9.79□□□□□ -0.84
ERBB2-218ENST00000584450 FCGR2BP31994 310 aaPredicted RBP9.79□□□□□ -0.84
ERBB2-218ENST00000584450 DIAPH2-AS1Q14236 149 aa9.79□□□□□ -0.84
ERBB2-218ENST00000584450 TMEM183AQ8IXX5 376 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms