RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 ATG12O94817 140 aa16.07■□□□□ 0.16
PPP4R1-228ENST00000584074 MT-CO2P00403 227 aa16.07■□□□□ 0.16
PPP4R1-228ENST00000584074 AKAIN1P0CW23 69 aa16.07■□□□□ 0.16
PPP4R1-228ENST00000584074 RBPMS2Q6ZRY4 209 aaKnown RBP16.07■□□□□ 0.16
PPP4R1-228ENST00000584074 ZNF414Q96IQ9 312 aa16.07■□□□□ 0.16
PPP4R1-228ENST00000584074 RETNQ9HD89 108 aa16.07■□□□□ 0.16
PPP4R1-228ENST00000584074 RABL2AQ9UBK7 228 aaPredicted RBP16.07■□□□□ 0.16
PPP4R1-228ENST00000584074 RABL2BQ9UNT1 228 aa16.07■□□□□ 0.16
PPP4R1-228ENST00000584074 C14orf166Q9Y224 244 aaKnown RBP16.07■□□□□ 0.16
PPP4R1-228ENST00000584074 TRAV25A0A0B4J276 109 aa16.06■□□□□ 0.16
PPP4R1-228ENST00000584074 A0A0G2JRQ6 117 aa16.06■□□□□ 0.16
PPP4R1-228ENST00000584074 IFNA17P01571 189 aa16.06■□□□□ 0.16
PPP4R1-228ENST00000584074 MFAP4P55083 255 aa16.06■□□□□ 0.16
PPP4R1-228ENST00000584074 CASC10Q5T4H9 136 aa16.06■□□□□ 0.16
PPP4R1-228ENST00000584074 SLC35G3Q8N808 338 aa16.06■□□□□ 0.16
PPP4R1-228ENST00000584074 PINX1Q96BK5 328 aaKnown RBP16.06■□□□□ 0.16
PPP4R1-228ENST00000584074 RRNAD1Q96FB5 475 aaKnown RBP16.06■□□□□ 0.16
PPP4R1-228ENST00000584074 TMEM222Q9H0R3 208 aa16.06■□□□□ 0.16
PPP4R1-228ENST00000584074 HIPK2Q9H2X6 1198 aa16.06■□□□□ 0.16
PPP4R1-228ENST00000584074 C5orf66Q9H5L9 145 aa16.06■□□□□ 0.16
PPP4R1-228ENST00000584074 EDA2RQ9HAV5 297 aa16.06■□□□□ 0.16
PPP4R1-228ENST00000584074 B3GALNT1O75752 331 aa16.05■□□□□ 0.16
PPP4R1-228ENST00000584074 OR5AC1P0C628 307 aa16.05■□□□□ 0.16
PPP4R1-228ENST00000584074 TNFSF8P32971 234 aa16.05■□□□□ 0.16
PPP4R1-228ENST00000584074 ETV6P41212 452 aa16.05■□□□□ 0.16
PPP4R1-228ENST00000584074 ANKRD55Q3KP44 614 aa16.05■□□□□ 0.16
PPP4R1-228ENST00000584074 OR51S1Q8NGJ8 323 aa16.05■□□□□ 0.16
PPP4R1-228ENST00000584074 NAA60Q9H7X0 242 aa16.05■□□□□ 0.16
PPP4R1-228ENST00000584074 GAR1Q9NY12 217 aaKnown RBP16.05■□□□□ 0.16
PPP4R1-228ENST00000584074 TEX13DA0A0J9YY54 714 aaPredicted RBP16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 ANKRD20A5PA0PJZ0 165 aa16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 K7EMT4 169 aa16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 NUPL2O15504 423 aaKnown RBP16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 GSTZ1O43708 216 aaPredicted RBP16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 CDS2O95674 445 aa16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 LYL1P12980 280 aa16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 FCGR2BP31994 310 aaPredicted RBP16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 SNCAP37840 140 aa16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 SURF2Q15527 256 aaPredicted RBP16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 Q6ZRM9 215 aa16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 MCFD2Q8NI22 146 aa16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 RNASE11Q8TAA1 199 aaKnown RBP16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 LHFPL5Q8TAF8 219 aa16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 GLYATL2Q8WU03 294 aa16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 TXN2Q99757 166 aa16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 SOSTQ9BQB4 213 aa16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 RSL24D1Q9UHA3 163 aaKnown RBP16.04■□□□□ 0.16
PPP4R1-228ENST00000584074 FABP12A6NFH5 140 aa16.03■□□□□ 0.16
PPP4R1-228ENST00000584074 C15orf62A8K5M9 175 aa16.03■□□□□ 0.16
PPP4R1-228ENST00000584074 INS-IGF2F8WCM5 200 aa16.03■□□□□ 0.16
PPP4R1-228ENST00000584074 RELQ04864 619 aaPredicted RBP16.03■□□□□ 0.16
PPP4R1-228ENST00000584074 PRRT1Q99946 306 aa16.03■□□□□ 0.16
PPP4R1-228ENST00000584074 FAM110AQ9BQ89 295 aa16.03■□□□□ 0.16
PPP4R1-228ENST00000584074 PDCD10Q9BUL8 212 aa16.03■□□□□ 0.16
PPP4R1-228ENST00000584074 NXF2Q9GZY0 626 aaKnown RBP16.03■□□□□ 0.16
PPP4R1-228ENST00000584074 GPR132Q9UNW8 380 aa16.03■□□□□ 0.16
PPP4R1-228ENST00000584074 YIF1AO95070 293 aa16.02■□□□□ 0.16
PPP4R1-228ENST00000584074 HOXA1P49639 335 aaPredicted RBP16.02■□□□□ 0.16
PPP4R1-228ENST00000584074 SPAG8Q99932 426 aaPredicted RBP16.02■□□□□ 0.16
PPP4R1-228ENST00000584074 CRYM-AS1A6NIL9 109 aa16.01■□□□□ 0.15
PPP4R1-228ENST00000584074 TSPAN4O14817 238 aa16.01■□□□□ 0.15
PPP4R1-228ENST00000584074 GNG7O60262 68 aa16.01■□□□□ 0.15
PPP4R1-228ENST00000584074 RNASE2P10153 161 aaKnown RBP16.01■□□□□ 0.15
PPP4R1-228ENST00000584074 LAMTOR1Q6IAA8 161 aa16.01■□□□□ 0.15
PPP4R1-228ENST00000584074 SELENOHQ8IZQ5 122 aaKnown RBP16.01■□□□□ 0.15
PPP4R1-228ENST00000584074 RBPMSQ93062 196 aaKnown RBP16.01■□□□□ 0.15
PPP4R1-228ENST00000584074 SMPXQ9UHP9 88 aa16.01■□□□□ 0.15
PPP4R1-228ENST00000584074 IGHV3-49A0A0A0MS15 119 aa16■□□□□ 0.15
PPP4R1-228ENST00000584074 DHODHQ02127 395 aa16■□□□□ 0.15
PPP4R1-228ENST00000584074 PVRIGQ6DKI7 326 aa16■□□□□ 0.15
PPP4R1-228ENST00000584074 ZFAND6Q6FIF0 208 aa16■□□□□ 0.15
PPP4R1-228ENST00000584074 FAM219AQ8IW50 185 aa16■□□□□ 0.15
PPP4R1-228ENST00000584074 CSMD3Q7Z407 3707 aa16■□□□□ 0.15
PPP4R1-228ENST00000584074 IGHV7-4-1A0A0J9YVY3 117 aa15.99■□□□□ 0.15
PPP4R1-228ENST00000584074 SUB1P53999 127 aaKnown RBP eCLIP15.99■□□□□ 0.15
PPP4R1-228ENST00000584074 AARDQ4LEZ3 155 aa15.99■□□□□ 0.15
PPP4R1-228ENST00000584074 TMEM268Q5VZI3 342 aa15.99■□□□□ 0.15
PPP4R1-228ENST00000584074 DUSP18Q8NEJ0 188 aa15.99■□□□□ 0.15
PPP4R1-228ENST00000584074 OR10C1Q96KK4 312 aa15.99■□□□□ 0.15
PPP4R1-228ENST00000584074 ENY2Q9NPA8 101 aa15.99■□□□□ 0.15
PPP4R1-228ENST00000584074 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.99■□□□□ 0.15
PPP4R1-228ENST00000584074 MCUBQ9NWR8 336 aa15.99■□□□□ 0.15
PPP4R1-228ENST00000584074 UBQLN2Q9UHD9 624 aa15.99■□□□□ 0.15
PPP4R1-228ENST00000584074 NPBWR1P48145 328 aa15.98■□□□□ 0.15
PPP4R1-228ENST00000584074 SPCS3P61009 180 aa15.98■□□□□ 0.15
PPP4R1-228ENST00000584074 TMEM116Q8NCL8 245 aa15.98■□□□□ 0.15
PPP4R1-228ENST00000584074 TMEM230Q96A57 120 aa15.98■□□□□ 0.15
PPP4R1-228ENST00000584074 GPR146Q96CH1 333 aa15.98■□□□□ 0.15
PPP4R1-228ENST00000584074 RNF2Q99496 336 aa15.98■□□□□ 0.15
PPP4R1-228ENST00000584074 RHPN1-AS1Q9BWJ2 59 aa15.98■□□□□ 0.15
PPP4R1-228ENST00000584074 GGTLC1Q9BX51 225 aa15.98■□□□□ 0.15
PPP4R1-228ENST00000584074 PRR13Q9NZ81 148 aa15.98■□□□□ 0.15
PPP4R1-228ENST00000584074 CACNG5Q9UF02 275 aa15.98■□□□□ 0.15
PPP4R1-228ENST00000584074 SCP2D1Q9UJQ7 156 aa15.98■□□□□ 0.15
PPP4R1-228ENST00000584074 TMEM56-RWDD3S4R434 201 aa15.98■□□□□ 0.15
PPP4R1-228ENST00000584074 LOC102724200A0A096LPH7 203 aaPredicted RBP15.97■□□□□ 0.15
PPP4R1-228ENST00000584074 CCDC160A6NGH7 325 aa15.97■□□□□ 0.15
PPP4R1-228ENST00000584074 CHEK1O14757 476 aa15.97■□□□□ 0.15
PPP4R1-228ENST00000584074 MLANAQ16655 118 aa15.97■□□□□ 0.15
PPP4R1-228ENST00000584074 TOMM20LQ6UXN7 152 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms