RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 MBD3L3A6NE82 208 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-231ENST00000584063 MBD3L5A6NJ08 208 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-231ENST00000584063 ZG16O60844 167 aa9.6□□□□□ -0.87
CDK5RAP3-231ENST00000584063 IFNA1P01562 189 aa9.6□□□□□ -0.87
CDK5RAP3-231ENST00000584063 RPL30P62888 115 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-231ENST00000584063 SP5Q6BEB4 398 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-231ENST00000584063 FAM71F2Q6NXP2 309 aa9.6□□□□□ -0.87
CDK5RAP3-231ENST00000584063 Q6ZVH6 145 aa9.6□□□□□ -0.87
CDK5RAP3-231ENST00000584063 RNF183Q96D59 192 aa9.6□□□□□ -0.87
CDK5RAP3-231ENST00000584063 DCTN5Q9BTE1 182 aa9.6□□□□□ -0.87
CDK5RAP3-231ENST00000584063 OR51I2Q9H344 312 aa9.6□□□□□ -0.87
CDK5RAP3-231ENST00000584063 FUT9Q9Y231 359 aa9.6□□□□□ -0.87
CDK5RAP3-231ENST00000584063 COX11Q9Y6N1 276 aa9.6□□□□□ -0.87
CDK5RAP3-231ENST00000584063 SH2D7A6NKC9 451 aaPredicted RBP9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 PAGE4O60829 102 aa9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 GLRXP35754 106 aa9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 C12orf54Q6X4T0 127 aa9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 SPACA3Q8IXA5 215 aa9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 ABHD14BQ96IU4 210 aa9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 DERL1Q9BUN8 251 aa9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 ACTR3CQ9C0K3 210 aaPredicted RBP9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 OR2D2Q9H210 308 aa9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 THYN1Q9P016 225 aa9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 UBE2NP61088 152 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 GNB2P62879 340 aa9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 HIST2H2BCQ6DN03 193 aa9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 HIST2H2BDQ6DRA6 164 aa9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 OR5A2Q8NGI9 324 aa9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 TAF15Q92804 592 aaKnown RBP eCLIP9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 WDR61Q9GZS3 305 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 CISD1Q9NZ45 108 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-231ENST00000584063 TRAV38-1A0A0B4J264 116 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 IGHV2OR16-5A0A0B4J2B6 119 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 DVL1O14640 695 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 PSPNO60542 156 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 MPV17P39210 176 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 IGFL2Q6UWQ7 119 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 VKORC1L1Q8N0U8 176 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 GMPPAQ96IJ6 420 aaPredicted RBP9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 PARLQ9H300 379 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 ACACBO00763 2458 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 HIST1H1EP10412 219 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 GALR1P47211 349 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 AMTP48728 403 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 LRRC75BQ2VPJ9 315 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 Q6P435 159 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 SCCPDHQ8NBX0 429 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 VAX2Q9UIW0 290 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 TNCP24821 2201 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 ABCA4P78363 2273 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 C17orf98A8MV24 154 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 SLC17A3O00476 420 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 IGHV1-2P23083 117 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 LGALS4P56470 323 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 RPL23P62829 140 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 MEF2BQ02080 365 aaPredicted RBP9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 TMEM241Q24JQ0 296 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 RBMXL3Q8N7X1 1067 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 WIPF2Q8TF74 440 aaPredicted RBP9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 SMDT1Q9H4I9 107 aa9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 PATZ1Q9HBE1 687 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP3-231ENST00000584063 ABCA1O95477 2261 aa9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 CENPVL3A0A0U1RRI6 287 aa9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 H7BYZ3 331 aa9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 IGHG3P01860 377 aa9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 OR4A8P0C604 315 aa9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 EDDM3BP56851 147 aa9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 HBG1P69891 147 aa9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 HBG2P69892 147 aa9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 NIT1Q86X76 327 aa9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 OR10G4Q8NGN3 311 aa9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 OR10G7Q8NGN6 311 aa9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 SLC25A40Q8TBP6 338 aa9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 METRNQ9UJH8 293 aa9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 C1QTNF9P0C862 333 aa9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 Q6ZR03 302 aa9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 TCF23Q7RTU1 214 aa9.57□□□□□ -0.88
CDK5RAP3-231ENST00000584063 KIR2DL2P43627 348 aaPredicted RBP9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 GABRA2P47869 451 aa9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 HIST1H1AQ02539 215 aaPredicted RBP9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 EDDM3AQ14507 147 aa9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 VWC2Q2TAL6 325 aa9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 C1orf194Q5T5A4 169 aa9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 STPG4Q8N801 248 aa9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 COQ2Q96H96 371 aa9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 ODAMA1E959 279 aa9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 GAGE12BA1L429 117 aa9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 RNF212BA8MTL3 300 aa9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 PPP5D1E7EU14 171 aa9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 NPPCP23582 126 aa9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 NRN1LQ496H8 165 aa9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 ACSF3Q4G176 576 aaPredicted RBP9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 DGAT2L7PQ6IED9 249 aa9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 STHQ8IWL8 128 aa9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 SNRNP40Q96DI7 357 aaKnown RBP9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 NDFIP1Q9BT67 221 aa9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 HEYLQ9NQ87 328 aaPredicted RBP9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 CLCF1Q9UBD9 225 aa9.56□□□□□ -0.88
CDK5RAP3-231ENST00000584063 TCF19Q9Y242 345 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms